RNA–Protein interactions for RNA: ENST00000403461.5

CEACAM1-208, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, human

TSL 1 (best) BASIC

Gene CEACAM1, Length 1,263 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CEACAM1-208	ENST00000403461	IGSF21	Q96ID5	467 aa		7.53	□□□□□ -1.2
CEACAM1-208	ENST00000403461	JPH2	Q9BR39	696 aa	Predicted RBP	7.53	□□□□□ -1.2
CEACAM1-208	ENST00000403461	IER2	Q9BTL4	223 aa		7.53	□□□□□ -1.2
CEACAM1-208	ENST00000403461	LRRC2	Q9BYS8	371 aa		7.53	□□□□□ -1.2
CEACAM1-208	ENST00000403461	SMOC2	Q9H3U7	446 aa		7.53	□□□□□ -1.2
CEACAM1-208	ENST00000403461	KCNK12	Q9HB15	430 aa		7.53	□□□□□ -1.2
CEACAM1-208	ENST00000403461	SP110	Q9HB58	689 aa		7.53	□□□□□ -1.2
CEACAM1-208	ENST00000403461	GPRC5C	Q9NQ84	441 aa		7.53	□□□□□ -1.2
CEACAM1-208	ENST00000403461	MRPL17	Q9NRX2	175 aa	Known RBP	7.53	□□□□□ -1.2
CEACAM1-208	ENST00000403461	WNT16	Q9UBV4	365 aa		7.53	□□□□□ -1.2
CEACAM1-208	ENST00000403461	PIN4	Q9Y237	131 aa	Known RBP	7.53	□□□□□ -1.2
CEACAM1-208	ENST00000403461	IGLV3-22	A0A075B6J6	115 aa		7.52	□□□□□ -1.21
CEACAM1-208	ENST00000403461	ESYT2	A0FGR8	921 aa		7.52	□□□□□ -1.21
CEACAM1-208	ENST00000403461	BIN1	O00499	593 aa		7.52	□□□□□ -1.21
CEACAM1-208	ENST00000403461	GAS7	O60861	476 aa		7.52	□□□□□ -1.21
CEACAM1-208	ENST00000403461	FAM153B	P0C7A2	387 aa		7.52	□□□□□ -1.21
CEACAM1-208	ENST00000403461	PAM	P19021	973 aa		7.52	□□□□□ -1.21
CEACAM1-208	ENST00000403461	ECI1	P42126	302 aa		7.52	□□□□□ -1.21
CEACAM1-208	ENST00000403461	RCAN1	P53805	252 aa		7.52	□□□□□ -1.21
CEACAM1-208	ENST00000403461	MAP4K2	Q12851	820 aa		7.52	□□□□□ -1.21
CEACAM1-208	ENST00000403461	PTPN14	Q15678	1187 aa		7.52	□□□□□ -1.21
CEACAM1-208	ENST00000403461	SLC14A2	Q15849	920 aa		7.52	□□□□□ -1.21
CEACAM1-208	ENST00000403461	LETM2	Q2VYF4	491 aa		7.52	□□□□□ -1.21
CEACAM1-208	ENST00000403461	ZC3H12B	Q5HYM0	836 aa	Known RBP	7.52	□□□□□ -1.21
CEACAM1-208	ENST00000403461	OGFOD2	Q6N063	350 aa		7.52	□□□□□ -1.21
CEACAM1-208	ENST00000403461	CEP128	Q6ZU80	1094 aa		7.52	□□□□□ -1.21
CEACAM1-208	ENST00000403461	CATSPER4	Q7RTX7	472 aa		7.52	□□□□□ -1.21
CEACAM1-208	ENST00000403461	SLCO6A1	Q86UG4	719 aa		7.52	□□□□□ -1.21
CEACAM1-208	ENST00000403461	ZNF410	Q86VK4	478 aa		7.52	□□□□□ -1.21
CEACAM1-208	ENST00000403461	LILRA2	Q8N149	483 aa		7.52	□□□□□ -1.21
CEACAM1-208	ENST00000403461	LINC01465	Q8N7H1	131 aa		7.52	□□□□□ -1.21
CEACAM1-208	ENST00000403461	CCDC148	Q8NFR7	591 aa		7.52	□□□□□ -1.21
CEACAM1-208	ENST00000403461	CMAS	Q8NFW8	434 aa	Predicted RBP	7.52	□□□□□ -1.21
CEACAM1-208	ENST00000403461	RDM1	Q8NG50	284 aa		7.52	□□□□□ -1.21
CEACAM1-208	ENST00000403461	THAP3	Q8WTV1	239 aa	Predicted RBP	7.52	□□□□□ -1.21
CEACAM1-208	ENST00000403461	FRS2	Q8WU20	508 aa		7.52	□□□□□ -1.21
CEACAM1-208	ENST00000403461	SLC22A17	Q8WUG5	538 aa		7.52	□□□□□ -1.21
CEACAM1-208	ENST00000403461	KCTD13	Q8WZ19	329 aa		7.52	□□□□□ -1.21
CEACAM1-208	ENST00000403461	ZNF668	Q96K58	619 aa	Predicted RBP	7.52	□□□□□ -1.21
CEACAM1-208	ENST00000403461	TEKT3	Q9BXF9	490 aa		7.52	□□□□□ -1.21
CEACAM1-208	ENST00000403461	TBC1D13	Q9NVG8	400 aa		7.52	□□□□□ -1.21
CEACAM1-208	ENST00000403461	PTPRZ1	P23471	2315 aa	Predicted RBP	7.52	□□□□□ -1.21
CEACAM1-208	ENST00000403461	NPHP3-ACAD11	A0A0J9YXS1	232 aa		7.51	□□□□□ -1.21
CEACAM1-208	ENST00000403461	KLF18	A0A0U1RQI7	1052 aa		7.51	□□□□□ -1.21
CEACAM1-208	ENST00000403461	PRODH	O43272	600 aa		7.51	□□□□□ -1.21
CEACAM1-208	ENST00000403461	CHMP2A	O43633	222 aa		7.51	□□□□□ -1.21
CEACAM1-208	ENST00000403461	PI15	O43692	258 aa		7.51	□□□□□ -1.21
CEACAM1-208	ENST00000403461	DLX3	O60479	287 aa		7.51	□□□□□ -1.21
CEACAM1-208	ENST00000403461	GLUD1	P00367	558 aa		7.51	□□□□□ -1.21
CEACAM1-208	ENST00000403461	ALDH2	P05091	517 aa		7.51	□□□□□ -1.21
CEACAM1-208	ENST00000403461	GALT	P07902	379 aa		7.51	□□□□□ -1.21
CEACAM1-208	ENST00000403461	PABPC1	P11940	636 aa	Known RBP	7.51	□□□□□ -1.21
CEACAM1-208	ENST00000403461	PLS3	P13797	630 aa		7.51	□□□□□ -1.21
CEACAM1-208	ENST00000403461	FGFR4	P22455	802 aa		7.51	□□□□□ -1.21
CEACAM1-208	ENST00000403461	SLC11A1	P49279	550 aa		7.51	□□□□□ -1.21
CEACAM1-208	ENST00000403461	CLCN4	P51793	760 aa		7.51	□□□□□ -1.21
CEACAM1-208	ENST00000403461	AK2	P54819	239 aa		7.51	□□□□□ -1.21
CEACAM1-208	ENST00000403461	KRT32	Q14532	448 aa		7.51	□□□□□ -1.21
CEACAM1-208	ENST00000403461	PUM1	Q14671	1186 aa	Known RBP eCLIP	7.51	□□□□□ -1.21
CEACAM1-208	ENST00000403461	PFKFB3	Q16875	520 aa	Predicted RBP	7.51	□□□□□ -1.21
CEACAM1-208	ENST00000403461	XKR3	Q5GH77	459 aa		7.51	□□□□□ -1.21
CEACAM1-208	ENST00000403461	LRCH2	Q5VUJ6	765 aa		7.51	□□□□□ -1.21
CEACAM1-208	ENST00000403461	YOD1	Q5VVQ6	348 aa	Predicted RBP	7.51	□□□□□ -1.21
CEACAM1-208	ENST00000403461	MIER3	Q7Z3K6	550 aa		7.51	□□□□□ -1.21
CEACAM1-208	ENST00000403461	TMEM173	Q86WV6	379 aa	Predicted RBP	7.51	□□□□□ -1.21
CEACAM1-208	ENST00000403461	RHPN2	Q8IUC4	686 aa		7.51	□□□□□ -1.21
CEACAM1-208	ENST00000403461	SCUBE1	Q8IWY4	988 aa		7.51	□□□□□ -1.21
CEACAM1-208	ENST00000403461	EXOC8	Q8IYI6	725 aa		7.51	□□□□□ -1.21
CEACAM1-208	ENST00000403461	TMEM145	Q8NBT3	493 aa		7.51	□□□□□ -1.21
CEACAM1-208	ENST00000403461	PHKB	Q93100	1093 aa		7.51	□□□□□ -1.21
CEACAM1-208	ENST00000403461	C1orf159	Q96HA4	380 aa		7.51	□□□□□ -1.21
CEACAM1-208	ENST00000403461	NLRP4	Q96MN2	994 aa		7.51	□□□□□ -1.21
CEACAM1-208	ENST00000403461	KLHL5	Q96PQ7	755 aa		7.51	□□□□□ -1.21
CEACAM1-208	ENST00000403461	RIT2	Q99578	217 aa		7.51	□□□□□ -1.21
CEACAM1-208	ENST00000403461	TMEM175	Q9BSA9	504 aa		7.51	□□□□□ -1.21
CEACAM1-208	ENST00000403461	LSG1	Q9H089	658 aa	Known RBP	7.51	□□□□□ -1.21
CEACAM1-208	ENST00000403461	ZMYND12	Q9H0C1	365 aa		7.51	□□□□□ -1.21
CEACAM1-208	ENST00000403461	NRDE2	Q9H7Z3	1164 aa		7.51	□□□□□ -1.21
CEACAM1-208	ENST00000403461	SUCLA2	Q9P2R7	463 aa	Predicted RBP	7.51	□□□□□ -1.21
CEACAM1-208	ENST00000403461	FAN1	Q9Y2M0	1017 aa		7.51	□□□□□ -1.21
CEACAM1-208	ENST00000403461	NLRC5	Q86WI3	1866 aa		7.51	□□□□□ -1.21
CEACAM1-208	ENST00000403461	CNTNAP2	Q9UHC6	1331 aa		7.51	□□□□□ -1.21
CEACAM1-208	ENST00000403461	WDFY4	Q6ZS81	3184 aa		7.51	□□□□□ -1.21
CEACAM1-208	ENST00000403461		A0A087WZ62	844 aa		7.5	□□□□□ -1.21
CEACAM1-208	ENST00000403461	NOTO	A8MTQ0	251 aa		7.5	□□□□□ -1.21
CEACAM1-208	ENST00000403461	NRDC	O43847	1150 aa		7.5	□□□□□ -1.21
CEACAM1-208	ENST00000403461	ZNF623	O75123	536 aa		7.5	□□□□□ -1.21
CEACAM1-208	ENST00000403461	OFD1	O75665	1012 aa		7.5	□□□□□ -1.21
CEACAM1-208	ENST00000403461	CNP	P09543	421 aa	Known RBP	7.5	□□□□□ -1.21
CEACAM1-208	ENST00000403461	SDHB	P21912	280 aa		7.5	□□□□□ -1.21
CEACAM1-208	ENST00000403461	CIITA	P33076	1130 aa		7.5	□□□□□ -1.21
CEACAM1-208	ENST00000403461	PRSS53	Q2L4Q9	553 aa		7.5	□□□□□ -1.21
CEACAM1-208	ENST00000403461	LONRF3	Q496Y0	759 aa		7.5	□□□□□ -1.21
CEACAM1-208	ENST00000403461	C2orf27A	Q580R0	203 aa		7.5	□□□□□ -1.21
CEACAM1-208	ENST00000403461	SPECC1	Q5M775	1068 aa		7.5	□□□□□ -1.21
CEACAM1-208	ENST00000403461	SLC35F1	Q5T1Q4	408 aa		7.5	□□□□□ -1.21
CEACAM1-208	ENST00000403461	ACBD5	Q5T8D3	534 aa	Predicted RBP	7.5	□□□□□ -1.21
CEACAM1-208	ENST00000403461	E4F1	Q66K89	784 aa	Predicted RBP	7.5	□□□□□ -1.21
CEACAM1-208	ENST00000403461	IQCE	Q6IPM2	695 aa		7.5	□□□□□ -1.21
CEACAM1-208	ENST00000403461	GALNT18	Q6P9A2	607 aa		7.5	□□□□□ -1.21

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