RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 LEO1Q8WVC0 666 aaPredicted RBP12.79□□□□□ -0.36
SPTLC1P3-201ENST00000403408 RNF38Q9H0F5 515 aa12.79□□□□□ -0.36
SPTLC1P3-201ENST00000403408 ASB7Q9H672 318 aa12.79□□□□□ -0.36
SPTLC1P3-201ENST00000403408 BLOC1S4Q9NUP1 217 aa12.79□□□□□ -0.36
SPTLC1P3-201ENST00000403408 ARHGAP26Q9UNA1 814 aa12.79□□□□□ -0.36
SPTLC1P3-201ENST00000403408 STK24Q9Y6E0 443 aa12.79□□□□□ -0.36
SPTLC1P3-201ENST00000403408 STYXL1Q9Y6J8 313 aa12.79□□□□□ -0.36
SPTLC1P3-201ENST00000403408 K7ENM7 598 aa12.78□□□□□ -0.36
SPTLC1P3-201ENST00000403408 LEFTY2O00292 366 aa12.78□□□□□ -0.36
SPTLC1P3-201ENST00000403408 ATP2C2O75185 946 aa12.78□□□□□ -0.36
SPTLC1P3-201ENST00000403408 INTS6LQ5JSJ4 861 aaKnown RBP12.78□□□□□ -0.36
SPTLC1P3-201ENST00000403408 RHBDF2Q6PJF5 856 aa12.78□□□□□ -0.36
SPTLC1P3-201ENST00000403408 FILIP1Q7Z7B0 1213 aa12.78□□□□□ -0.36
SPTLC1P3-201ENST00000403408 ADGRG2Q8IZP9 1017 aa12.78□□□□□ -0.36
SPTLC1P3-201ENST00000403408 C1orf127Q8N9H9 656 aa12.78□□□□□ -0.36
SPTLC1P3-201ENST00000403408 NUSAP1Q9BXS6 441 aaKnown RBP12.78□□□□□ -0.36
SPTLC1P3-201ENST00000403408 SLC32A1Q9H598 525 aa12.78□□□□□ -0.36
SPTLC1P3-201ENST00000403408 DDX43Q9NXZ2 648 aaKnown RBP12.78□□□□□ -0.36
SPTLC1P3-201ENST00000403408 ATMQ13315 3056 aa12.77□□□□□ -0.36
SPTLC1P3-201ENST00000403408 PTPRQQ9UMZ3 2332 aa12.77□□□□□ -0.36
SPTLC1P3-201ENST00000403408 A0A0A0MRY4 1105 aa12.77□□□□□ -0.37
SPTLC1P3-201ENST00000403408 GJB3O75712 270 aa12.77□□□□□ -0.37
SPTLC1P3-201ENST00000403408 HDCP19113 662 aa12.77□□□□□ -0.37
SPTLC1P3-201ENST00000403408 POLR2BP30876 1174 aaKnown RBP12.77□□□□□ -0.37
SPTLC1P3-201ENST00000403408 MRPS21P82921 87 aaKnown RBP12.77□□□□□ -0.37
SPTLC1P3-201ENST00000403408 ATP2C1P98194 919 aaPredicted RBP12.77□□□□□ -0.37
SPTLC1P3-201ENST00000403408 GTF2BQ00403 316 aa12.77□□□□□ -0.37
SPTLC1P3-201ENST00000403408 DHCR24Q15392 516 aa12.77□□□□□ -0.37
SPTLC1P3-201ENST00000403408 LYSMD4Q5XG99 296 aa12.77□□□□□ -0.37
SPTLC1P3-201ENST00000403408 GPBP1Q86WP2 473 aa12.77□□□□□ -0.37
SPTLC1P3-201ENST00000403408 MIB1Q86YT6 1006 aa12.77□□□□□ -0.37
SPTLC1P3-201ENST00000403408 SLC41A1Q8IVJ1 513 aa12.77□□□□□ -0.37
SPTLC1P3-201ENST00000403408 MYCT1Q8N699 235 aa12.77□□□□□ -0.37
SPTLC1P3-201ENST00000403408 PNPLA1Q8N8W4 532 aa12.77□□□□□ -0.37
SPTLC1P3-201ENST00000403408 HMGB4Q8WW32 186 aa12.77□□□□□ -0.37
SPTLC1P3-201ENST00000403408 ACBD6Q9BR61 282 aa12.77□□□□□ -0.37
SPTLC1P3-201ENST00000403408 GTPBP2Q9BX10 602 aaKnown RBP12.77□□□□□ -0.37
SPTLC1P3-201ENST00000403408 RAB34Q9BZG1 259 aa12.77□□□□□ -0.37
SPTLC1P3-201ENST00000403408 CD248Q9HCU0 757 aa12.77□□□□□ -0.37
SPTLC1P3-201ENST00000403408 ABCB6Q9NP58 842 aa12.77□□□□□ -0.37
SPTLC1P3-201ENST00000403408 CD93Q9NPY3 652 aa12.77□□□□□ -0.37
SPTLC1P3-201ENST00000403408 TMEM30AQ9NV96 361 aa12.77□□□□□ -0.37
SPTLC1P3-201ENST00000403408 LARSQ9P2J5 1176 aaKnown RBP12.77□□□□□ -0.37
SPTLC1P3-201ENST00000403408 SIX4Q9UIU6 781 aa12.77□□□□□ -0.37
SPTLC1P3-201ENST00000403408 CIZ1Q9ULV3 898 aaPredicted RBP12.77□□□□□ -0.37
SPTLC1P3-201ENST00000403408 NOL7Q9UMY1 257 aaKnown RBP12.77□□□□□ -0.37
SPTLC1P3-201ENST00000403408 NME7Q9Y5B8 376 aa12.77□□□□□ -0.37
SPTLC1P3-201ENST00000403408 GABRDO14764 452 aa12.76□□□□□ -0.37
SPTLC1P3-201ENST00000403408 TRIM24O15164 1050 aa12.76□□□□□ -0.37
SPTLC1P3-201ENST00000403408 SH3BP5O60239 455 aa12.76□□□□□ -0.37
SPTLC1P3-201ENST00000403408 KAT7O95251 611 aa12.76□□□□□ -0.37
SPTLC1P3-201ENST00000403408 NFATC1O95644 943 aa12.76□□□□□ -0.37
SPTLC1P3-201ENST00000403408 CFIP05156 583 aa12.76□□□□□ -0.37
SPTLC1P3-201ENST00000403408 RPL10AP62906 217 aaKnown RBP12.76□□□□□ -0.37
SPTLC1P3-201ENST00000403408 TSPY1Q01534 308 aa12.76□□□□□ -0.37
SPTLC1P3-201ENST00000403408 GRIN1Q05586 938 aa12.76□□□□□ -0.37
SPTLC1P3-201ENST00000403408 KDSRQ06136 332 aa12.76□□□□□ -0.37
SPTLC1P3-201ENST00000403408 KCNA1Q09470 495 aa12.76□□□□□ -0.37
SPTLC1P3-201ENST00000403408 DHX8Q14562 1220 aaKnown RBP12.76□□□□□ -0.37
SPTLC1P3-201ENST00000403408 MCM6Q14566 821 aa12.76□□□□□ -0.37
SPTLC1P3-201ENST00000403408 NFE2Q16621 373 aaPredicted RBP12.76□□□□□ -0.37
SPTLC1P3-201ENST00000403408 CFAP221Q4G0U5 840 aa12.76□□□□□ -0.37
SPTLC1P3-201ENST00000403408 ADALQ6DHV7 355 aa12.76□□□□□ -0.37
SPTLC1P3-201ENST00000403408 FAM171BQ6P995 826 aa12.76□□□□□ -0.37
SPTLC1P3-201ENST00000403408 MARCH9Q86YJ5 346 aa12.76□□□□□ -0.37
SPTLC1P3-201ENST00000403408 SCN4BQ8IWT1 228 aa12.76□□□□□ -0.37
SPTLC1P3-201ENST00000403408 MINDY1Q8N5J2 469 aa12.76□□□□□ -0.37
SPTLC1P3-201ENST00000403408 MDM1Q8TC05 714 aa12.76□□□□□ -0.37
SPTLC1P3-201ENST00000403408 WHAMMQ8TF30 809 aa12.76□□□□□ -0.37
SPTLC1P3-201ENST00000403408 COL26A1Q96A83 441 aa12.76□□□□□ -0.37
SPTLC1P3-201ENST00000403408 KCND2Q9NZV8 630 aa12.76□□□□□ -0.37
SPTLC1P3-201ENST00000403408 UXTQ9UBK9 157 aaPredicted RBP12.76□□□□□ -0.37
SPTLC1P3-201ENST00000403408 KCNG1Q9UIX4 513 aa12.76□□□□□ -0.37
SPTLC1P3-201ENST00000403408 AGO2Q9UKV8 859 aaKnown RBP12.76□□□□□ -0.37
SPTLC1P3-201ENST00000403408 ODF2LQ9ULJ1 636 aa12.76□□□□□ -0.37
SPTLC1P3-201ENST00000403408 SLC6A14Q9UN76 642 aa12.76□□□□□ -0.37
SPTLC1P3-201ENST00000403408 AGAP1Q9UPQ3 857 aa12.76□□□□□ -0.37
SPTLC1P3-201ENST00000403408 TCRBV21S2A2A0A5A6 115 aa12.75□□□□□ -0.37
SPTLC1P3-201ENST00000403408 VWA3AA6NCI4 1184 aa12.75□□□□□ -0.37
SPTLC1P3-201ENST00000403408 H0YCG3 227 aa12.75□□□□□ -0.37
SPTLC1P3-201ENST00000403408 LAD1O00515 517 aa12.75□□□□□ -0.37
SPTLC1P3-201ENST00000403408 MAP3K13O43283 966 aa12.75□□□□□ -0.37
SPTLC1P3-201ENST00000403408 TRAK2O60296 914 aa12.75□□□□□ -0.37
SPTLC1P3-201ENST00000403408 SEC24BO95487 1268 aa12.75□□□□□ -0.37
SPTLC1P3-201ENST00000403408 OLFM2O95897 454 aa12.75□□□□□ -0.37
SPTLC1P3-201ENST00000403408 ITGB3P05106 788 aa12.75□□□□□ -0.37
SPTLC1P3-201ENST00000403408 GABRG2P18507 467 aa12.75□□□□□ -0.37
SPTLC1P3-201ENST00000403408 LMO2P25791 158 aa12.75□□□□□ -0.37
SPTLC1P3-201ENST00000403408 CACNA2D1P54289 1103 aa12.75□□□□□ -0.37
SPTLC1P3-201ENST00000403408 NR1H3Q13133 447 aa12.75□□□□□ -0.37
SPTLC1P3-201ENST00000403408 SOWAHAQ2M3V2 549 aa12.75□□□□□ -0.37
SPTLC1P3-201ENST00000403408 SV2CQ496J9 727 aa12.75□□□□□ -0.37
SPTLC1P3-201ENST00000403408 CCNI2Q6ZMN8 369 aaPredicted RBP12.75□□□□□ -0.37
SPTLC1P3-201ENST00000403408 LIMS2Q7Z4I7 341 aa12.75□□□□□ -0.37
SPTLC1P3-201ENST00000403408 SLCO6A1Q86UG4 719 aa12.75□□□□□ -0.37
SPTLC1P3-201ENST00000403408 KBTBD7Q8WVZ9 684 aa12.75□□□□□ -0.37
SPTLC1P3-201ENST00000403408 WBP2Q969T9 261 aa12.75□□□□□ -0.37
SPTLC1P3-201ENST00000403408 EXOC4Q96A65 974 aa12.75□□□□□ -0.37
SPTLC1P3-201ENST00000403408 ERLEC1Q96DZ1 483 aa12.75□□□□□ -0.37
SPTLC1P3-201ENST00000403408 CRELD1Q96HD1 420 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms