RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 CCDC60Q8IWA6 550 aaPredicted RBP20.78■□□□□ 0.92
CCDC47-202ENST00000403162 PYROXD1Q8WU10 500 aa20.78■□□□□ 0.92
CCDC47-202ENST00000403162 VPS11Q9H270 941 aa20.78■□□□□ 0.92
CCDC47-202ENST00000403162 DENND2DQ9H6A0 471 aaPredicted RBP20.78■□□□□ 0.92
CCDC47-202ENST00000403162 DOCK5Q9H7D0 1870 aa20.77■□□□□ 0.92
CCDC47-202ENST00000403162 E7ESA3 106 aa20.77■□□□□ 0.92
CCDC47-202ENST00000403162 ATP6V1C1P21283 382 aa20.77■□□□□ 0.92
CCDC47-202ENST00000403162 MARK3P27448 753 aa20.77■□□□□ 0.92
CCDC47-202ENST00000403162 CTCFP49711 727 aaPredicted RBP20.77■□□□□ 0.92
CCDC47-202ENST00000403162 NCOA4Q13772 614 aa20.77■□□□□ 0.92
CCDC47-202ENST00000403162 EMC2Q15006 297 aa20.77■□□□□ 0.92
CCDC47-202ENST00000403162 MTDHQ86UE4 582 aaKnown RBP20.77■□□□□ 0.92
CCDC47-202ENST00000403162 NAT8LQ8N9F0 302 aa20.77■□□□□ 0.92
CCDC47-202ENST00000403162 PAFAH2Q99487 392 aa20.77■□□□□ 0.92
CCDC47-202ENST00000403162 ZNF518BQ9C0D4 1074 aa20.77■□□□□ 0.92
CCDC47-202ENST00000403162 ZFYVE28Q9HCC9 887 aa20.77■□□□□ 0.92
CCDC47-202ENST00000403162 KANSL3Q9P2N6 904 aa20.77■□□□□ 0.92
CCDC47-202ENST00000403162 ADGRA2Q96PE1 1338 aa20.76■□□□□ 0.91
CCDC47-202ENST00000403162 C3orf70A6NLC5 250 aaPredicted RBP20.76■□□□□ 0.91
CCDC47-202ENST00000403162 GOLGA8SH3BPF8 625 aa20.76■□□□□ 0.91
CCDC47-202ENST00000403162 GOLGA8MH3BSY2 632 aa20.76■□□□□ 0.91
CCDC47-202ENST00000403162 PGK2P07205 417 aa20.76■□□□□ 0.91
CCDC47-202ENST00000403162 EFTUD2Q15029 972 aaKnown RBP eCLIP20.76■□□□□ 0.918e-6■□□□□ 8.1
CCDC47-202ENST00000403162 BANPQ8N9N5 519 aa20.76■□□□□ 0.91
CCDC47-202ENST00000403162 OR5B17Q8NGF7 314 aa20.76■□□□□ 0.91
CCDC47-202ENST00000403162 CPT1BQ92523 772 aa20.76■□□□□ 0.91
CCDC47-202ENST00000403162 ZBTB45Q96K62 511 aaPredicted RBP20.76■□□□□ 0.91
CCDC47-202ENST00000403162 MSTO1Q9BUK6 570 aa20.76■□□□□ 0.91
CCDC47-202ENST00000403162 DCLRE1BQ9H816 532 aa20.76■□□□□ 0.91
CCDC47-202ENST00000403162 JPH1Q9HDC5 661 aaPredicted RBP20.76■□□□□ 0.91
CCDC47-202ENST00000403162 A0A0B4J269 797 aa20.76■□□□□ 0.91
CCDC47-202ENST00000403162 TSHRP16473 764 aa20.76■□□□□ 0.91
CCDC47-202ENST00000403162 SSTR1P30872 391 aa20.76■□□□□ 0.91
CCDC47-202ENST00000403162 GRIK3Q13003 919 aa20.76■□□□□ 0.91
CCDC47-202ENST00000403162 SEPT7Q16181 437 aaKnown RBP20.76■□□□□ 0.91
CCDC47-202ENST00000403162 XKR3Q5GH77 459 aa20.76■□□□□ 0.91
CCDC47-202ENST00000403162 ZBTB41Q5SVQ8 909 aa20.76■□□□□ 0.91
CCDC47-202ENST00000403162 FNBP1LQ5T0N5 605 aa20.76■□□□□ 0.91
CCDC47-202ENST00000403162 ABHD15Q6UXT9 468 aa20.76■□□□□ 0.91
CCDC47-202ENST00000403162 TMEM35BQ8NCS4 154 aa20.76■□□□□ 0.91
CCDC47-202ENST00000403162 DNERQ8NFT8 737 aa20.76■□□□□ 0.91
CCDC47-202ENST00000403162 TCP10LQ8TDR4 215 aa20.76■□□□□ 0.91
CCDC47-202ENST00000403162 ACSF2Q96CM8 615 aaPredicted RBP20.76■□□□□ 0.91
CCDC47-202ENST00000403162 TUBB6Q9BUF5 446 aa20.76■□□□□ 0.91
CCDC47-202ENST00000403162 IMPG2Q9BZV3 1241 aa20.76■□□□□ 0.91
CCDC47-202ENST00000403162 SLC9A2Q9UBY0 812 aa20.76■□□□□ 0.91
CCDC47-202ENST00000403162 MTERF2Q49AM1 385 aa20.75■□□□□ 0.91
CCDC47-202ENST00000403162 MSS51Q4VC12 460 aa20.75■□□□□ 0.91
CCDC47-202ENST00000403162 ANKRD22Q5VYY1 191 aa20.75■□□□□ 0.91
CCDC47-202ENST00000403162 C3orf62Q6ZUJ4 267 aa20.75■□□□□ 0.91
CCDC47-202ENST00000403162 TTC13Q8NBP0 860 aa20.75■□□□□ 0.91
CCDC47-202ENST00000403162 TTC8Q8TAM2 541 aa20.75■□□□□ 0.91
CCDC47-202ENST00000403162 DCAKDQ8WVC6 231 aa20.75■□□□□ 0.91
CCDC47-202ENST00000403162 MIPEPQ99797 713 aa20.75■□□□□ 0.91
CCDC47-202ENST00000403162 WDR83Q9BRX9 315 aaKnown RBP20.75■□□□□ 0.91
CCDC47-202ENST00000403162 FAM167BQ9BTA0 163 aa20.75■□□□□ 0.91
CCDC47-202ENST00000403162 OSBPL1AQ9BXW6 950 aa20.75■□□□□ 0.91
CCDC47-202ENST00000403162 ADAM33Q9BZ11 813 aa20.75■□□□□ 0.91
CCDC47-202ENST00000403162 ZFATQ9P243 1243 aa20.75■□□□□ 0.91
CCDC47-202ENST00000403162 TELO2Q9Y4R8 837 aa20.75■□□□□ 0.91
CCDC47-202ENST00000403162 NUMBLQ9Y6R0 609 aa20.75■□□□□ 0.91
CCDC47-202ENST00000403162 SMAPO00193 183 aa20.75■□□□□ 0.91
CCDC47-202ENST00000403162 ABLIM1O14639 778 aa20.75■□□□□ 0.91
CCDC47-202ENST00000403162 RGS20O76081 388 aa20.75■□□□□ 0.91
CCDC47-202ENST00000403162 CDH5P33151 784 aaPredicted RBP20.75■□□□□ 0.91
CCDC47-202ENST00000403162 NAMPTP43490 491 aa20.75■□□□□ 0.91
CCDC47-202ENST00000403162 PTDSS1P48651 473 aaKnown RBP20.75■□□□□ 0.91
CCDC47-202ENST00000403162 ACTR2P61160 394 aa20.75■□□□□ 0.91
CCDC47-202ENST00000403162 GAD2Q05329 585 aa20.75■□□□□ 0.91
CCDC47-202ENST00000403162 CRHR2Q13324 411 aa20.75■□□□□ 0.91
CCDC47-202ENST00000403162 RHPN2Q8IUC4 686 aa20.75■□□□□ 0.91
CCDC47-202ENST00000403162 MANSC1Q9H8J5 431 aa20.75■□□□□ 0.91
CCDC47-202ENST00000403162 SOWAHBA6NEL2 793 aa20.74■□□□□ 0.91
CCDC47-202ENST00000403162 K7ERI5 159 aa20.74■□□□□ 0.91
CCDC47-202ENST00000403162 CCDC22O60826 627 aa20.74■□□□□ 0.91
CCDC47-202ENST00000403162 ASS1P00966 412 aaKnown RBP20.74■□□□□ 0.91
CCDC47-202ENST00000403162 ACADSP16219 412 aa20.74■□□□□ 0.91
CCDC47-202ENST00000403162 IRX1P78414 480 aaPredicted RBP20.74■□□□□ 0.91
CCDC47-202ENST00000403162 OTUD4Q01804 1114 aaKnown RBP20.74■□□□□ 0.91
CCDC47-202ENST00000403162 C4orf50Q6ZRC1 276 aa20.74■□□□□ 0.91
CCDC47-202ENST00000403162 RFWD2Q8NHY2 731 aa20.74■□□□□ 0.91
CCDC47-202ENST00000403162 ACTL9Q8TC94 416 aa20.74■□□□□ 0.91
CCDC47-202ENST00000403162 TRIM55Q9BYV6 548 aa20.74■□□□□ 0.91
CCDC47-202ENST00000403162 LCTP09848 1927 aa20.74■□□□□ 0.91
CCDC47-202ENST00000403162 ENTPD5O75356 428 aa20.73■□□□□ 0.91
CCDC47-202ENST00000403162 GDF10P55107 478 aa20.73■□□□□ 0.91
CCDC47-202ENST00000403162 HTRA3P83110 453 aa20.73■□□□□ 0.91
CCDC47-202ENST00000403162 ANO7Q6IWH7 933 aa20.73■□□□□ 0.91
CCDC47-202ENST00000403162 BBS12Q6ZW61 710 aa20.73■□□□□ 0.91
CCDC47-202ENST00000403162 LMNTD2Q8IXW0 634 aa20.73■□□□□ 0.91
CCDC47-202ENST00000403162 FBXO36Q8NEA4 188 aa20.73■□□□□ 0.91
CCDC47-202ENST00000403162 PTCD3Q96EY7 689 aaKnown RBP20.73■□□□□ 0.91
CCDC47-202ENST00000403162 CDHR1Q96JP9 859 aa20.73■□□□□ 0.91
CCDC47-202ENST00000403162 DNAJC25-GNG10A0A024R161 153 aa20.73■□□□□ 0.91
CCDC47-202ENST00000403162 DNAJC6O75061 913 aa20.73■□□□□ 0.91
CCDC47-202ENST00000403162 HAUS5O94927 633 aa20.73■□□□□ 0.91
CCDC47-202ENST00000403162 BRD2P25440 801 aaKnown RBP20.73■□□□□ 0.91
CCDC47-202ENST00000403162 GCKP35557 465 aa20.73■□□□□ 0.91
CCDC47-202ENST00000403162 AP3M2P53677 418 aa20.73■□□□□ 0.91
CCDC47-202ENST00000403162 SLC25A11Q02978 314 aaKnown RBP20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms