RNA–Protein interactions for RNA: ENST00000402554.7

NDEL1-203, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 5 BASIC

Gene NDEL1, Length 1,858 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-203ENST00000402554 TRAIPQ9BWF2 469 aa13.8□□□□□ -0.2
NDEL1-203ENST00000402554 CWH43Q9H720 699 aa13.8□□□□□ -0.2
NDEL1-203ENST00000402554 SYNCQ9H7C4 482 aa13.8□□□□□ -0.2
NDEL1-203ENST00000402554 CYTH4Q9UIA0 394 aa13.8□□□□□ -0.2
NDEL1-203ENST00000402554 TDRD15B5MCY1 1934 aaKnown RBP13.8□□□□□ -0.2
NDEL1-203ENST00000402554 SCN1AP35498 2009 aa13.8□□□□□ -0.2
NDEL1-203ENST00000402554 SPDYE4A6NLX3 237 aa13.8□□□□□ -0.2
NDEL1-203ENST00000402554 PSTPIP1O43586 416 aa13.8□□□□□ -0.2
NDEL1-203ENST00000402554 SASH3O75995 380 aa13.8□□□□□ -0.2
NDEL1-203ENST00000402554 EOMESO95936 686 aa13.8□□□□□ -0.2
NDEL1-203ENST00000402554 TAF6P49848 677 aa13.8□□□□□ -0.2
NDEL1-203ENST00000402554 RPL7AP62424 266 aaKnown RBP13.8□□□□□ -0.2
NDEL1-203ENST00000402554 GUCY2DQ02846 1103 aa13.8□□□□□ -0.2
NDEL1-203ENST00000402554 SOX4Q06945 474 aaPredicted RBP13.8□□□□□ -0.2
NDEL1-203ENST00000402554 STILQ15468 1287 aa13.8□□□□□ -0.2
NDEL1-203ENST00000402554 PPP1R15BQ5SWA1 713 aa13.8□□□□□ -0.2
NDEL1-203ENST00000402554 LCLAT1Q6UWP7 414 aa13.8□□□□□ -0.2
NDEL1-203ENST00000402554 ADAT2Q7Z6V5 191 aaKnown RBP13.8□□□□□ -0.2
NDEL1-203ENST00000402554 UNC93AQ86WB7 457 aa13.8□□□□□ -0.2
NDEL1-203ENST00000402554 MAFAQ8NHW3 353 aaPredicted RBP13.8□□□□□ -0.2
NDEL1-203ENST00000402554 CLP1Q92989 425 aaKnown RBP13.8□□□□□ -0.2
NDEL1-203ENST00000402554 C18orf8Q96DM3 657 aa13.8□□□□□ -0.2
NDEL1-203ENST00000402554 MCEEQ96PE7 176 aa13.8□□□□□ -0.2
NDEL1-203ENST00000402554 GDF3Q9NR23 364 aa13.8□□□□□ -0.2
NDEL1-203ENST00000402554 FAM53CQ9NYF3 392 aa13.8□□□□□ -0.2
NDEL1-203ENST00000402554 WDR35Q9P2L0 1181 aa13.8□□□□□ -0.2
NDEL1-203ENST00000402554 KPNA7A9QM74 516 aa13.79□□□□□ -0.2
NDEL1-203ENST00000402554 B4GALT3O60512 393 aa13.79□□□□□ -0.2
NDEL1-203ENST00000402554 ZNF623O75123 536 aa13.79□□□□□ -0.2
NDEL1-203ENST00000402554 MYBL2P10244 700 aa13.79□□□□□ -0.2
NDEL1-203ENST00000402554 BMPR1AP36894 532 aa13.79□□□□□ -0.2
NDEL1-203ENST00000402554 GPD2P43304 727 aa13.79□□□□□ -0.2
NDEL1-203ENST00000402554 PSMC1P62191 440 aaKnown RBP13.79□□□□□ -0.2
NDEL1-203ENST00000402554 GPM6BQ13491 265 aa13.79□□□□□ -0.2
NDEL1-203ENST00000402554 SOWAHAQ2M3V2 549 aa13.79□□□□□ -0.2
NDEL1-203ENST00000402554 SV2CQ496J9 727 aa13.79□□□□□ -0.2
NDEL1-203ENST00000402554 MAATS1Q7Z4T9 603 aa13.79□□□□□ -0.2
NDEL1-203ENST00000402554 SLC13A5Q86YT5 568 aaPredicted RBP13.79□□□□□ -0.2
NDEL1-203ENST00000402554 RHOT1Q8IXI2 618 aa13.79□□□□□ -0.2
NDEL1-203ENST00000402554 GSPT2Q8IYD1 628 aaKnown RBP13.79□□□□□ -0.2
NDEL1-203ENST00000402554 LRRC43Q8N309 656 aa13.79□□□□□ -0.2
NDEL1-203ENST00000402554 CPXM1Q96SM3 734 aa13.79□□□□□ -0.2
NDEL1-203ENST00000402554 EPB41L5Q9HCM4 733 aa13.79□□□□□ -0.2
NDEL1-203ENST00000402554 ALG13Q9NP73 1137 aaKnown RBP13.79□□□□□ -0.2
NDEL1-203ENST00000402554 GDAP2Q9NXN4 497 aa13.79□□□□□ -0.2
NDEL1-203ENST00000402554 USTQ9Y2C2 406 aa13.79□□□□□ -0.2
NDEL1-203ENST00000402554 NR2E1Q9Y466 385 aa13.79□□□□□ -0.2
NDEL1-203ENST00000402554 MTCH2Q9Y6C9 303 aa13.79□□□□□ -0.2
NDEL1-203ENST00000402554 GOLGA8SH3BPF8 625 aa13.78□□□□□ -0.2
NDEL1-203ENST00000402554 PTGESO14684 152 aa13.78□□□□□ -0.2
NDEL1-203ENST00000402554 MAP2K7O14733 419 aa13.78□□□□□ -0.2
NDEL1-203ENST00000402554 GRM6O15303 877 aa13.78□□□□□ -0.2
NDEL1-203ENST00000402554 HOXA2O43364 376 aa13.78□□□□□ -0.2
NDEL1-203ENST00000402554 LRPAP1P30533 357 aa13.78□□□□□ -0.2
NDEL1-203ENST00000402554 TNNT3P45378 269 aaPredicted RBP13.78□□□□□ -0.2
NDEL1-203ENST00000402554 GSCP56915 257 aaPredicted RBP13.78□□□□□ -0.2
NDEL1-203ENST00000402554 PDCLQ13371 301 aa13.78□□□□□ -0.2
NDEL1-203ENST00000402554 FAM43BQ6ZT52 329 aaPredicted RBP13.78□□□□□ -0.2
NDEL1-203ENST00000402554 MRPL10Q7Z7H8 261 aaKnown RBP13.78□□□□□ -0.2
NDEL1-203ENST00000402554 ACOT1Q86TX2 421 aa13.78□□□□□ -0.2
NDEL1-203ENST00000402554 COLGALT1Q8NBJ5 622 aa13.78□□□□□ -0.2
NDEL1-203ENST00000402554 OR6B3Q8NGW1 331 aa13.78□□□□□ -0.2
NDEL1-203ENST00000402554 UBA3Q8TBC4 463 aa13.78□□□□□ -0.2
NDEL1-203ENST00000402554 AENQ8WTP8 325 aaKnown RBP13.78□□□□□ -0.2
NDEL1-203ENST00000402554 DDX27Q96GQ7 796 aaKnown RBP13.78□□□□□ -0.2
NDEL1-203ENST00000402554 ZFP42Q96MM3 310 aa13.78□□□□□ -0.2
NDEL1-203ENST00000402554 SAMD11Q96NU1 681 aa13.78□□□□□ -0.2
NDEL1-203ENST00000402554 PPP1R10Q96QC0 940 aaKnown RBP13.78□□□□□ -0.2
NDEL1-203ENST00000402554 PLEKHA4Q9H4M7 779 aa13.78□□□□□ -0.2
NDEL1-203ENST00000402554 RSAD1Q9HA92 442 aa13.78□□□□□ -0.2
NDEL1-203ENST00000402554 GOLGA2P5Q9HBQ8 144 aa13.78□□□□□ -0.2
NDEL1-203ENST00000402554 SLC38A7Q9NVC3 462 aa13.78□□□□□ -0.2
NDEL1-203ENST00000402554 TSPAN16Q9UKR8 245 aa13.78□□□□□ -0.2
NDEL1-203ENST00000402554 PRRC2BQ5JSZ5 2229 aaKnown RBP13.78□□□□□ -0.2
NDEL1-203ENST00000402554 SIGLEC16A6NMB1 481 aa13.78□□□□□ -0.2
NDEL1-203ENST00000402554 A8MXQ7 604 aa13.78□□□□□ -0.2
NDEL1-203ENST00000402554 H3BNC9 293 aa13.78□□□□□ -0.2
NDEL1-203ENST00000402554 SPTLC1O15269 473 aa13.78□□□□□ -0.2
NDEL1-203ENST00000402554 POMCP01189 267 aa13.78□□□□□ -0.2
NDEL1-203ENST00000402554 ERBB2P04626 1255 aa13.78□□□□□ -0.2
NDEL1-203ENST00000402554 KRT3P12035 628 aa13.78□□□□□ -0.2
NDEL1-203ENST00000402554 SKIP12755 728 aa13.78□□□□□ -0.2
NDEL1-203ENST00000402554 MLH1P40692 756 aa13.78□□□□□ -0.2
NDEL1-203ENST00000402554 SSR1P43307 286 aaKnown RBP13.78□□□□□ -0.2
NDEL1-203ENST00000402554 GABRB2P47870 512 aa13.78□□□□□ -0.2
NDEL1-203ENST00000402554 PIGHQ14442 188 aaPredicted RBP13.78□□□□□ -0.2
NDEL1-203ENST00000402554 ZNF268Q14587 947 aaPredicted RBP13.78□□□□□ -0.2
NDEL1-203ENST00000402554 CASP8Q14790 479 aa13.78□□□□□ -0.2
NDEL1-203ENST00000402554 GOLGA7BQ2TAP0 167 aa13.78□□□□□ -0.2
NDEL1-203ENST00000402554 GLB1LQ6UWU2 654 aa13.78□□□□□ -0.2
NDEL1-203ENST00000402554 XYLT1Q86Y38 959 aa13.78□□□□□ -0.2
NDEL1-203ENST00000402554 KRT222Q8N1A0 295 aa13.78□□□□□ -0.2
NDEL1-203ENST00000402554 KLHL23Q8NBE8 558 aa13.78□□□□□ -0.2
NDEL1-203ENST00000402554 IPO4Q8TEX9 1081 aaKnown RBP13.78□□□□□ -0.2
NDEL1-203ENST00000402554 PGBD4Q96DM1 585 aa13.78□□□□□ -0.2
NDEL1-203ENST00000402554 GAD1Q99259 594 aa13.78□□□□□ -0.2
NDEL1-203ENST00000402554 DNAI2Q9GZS0 605 aa13.78□□□□□ -0.2
NDEL1-203ENST00000402554 TBC1D13Q9NVG8 400 aa13.78□□□□□ -0.2
NDEL1-203ENST00000402554 AMACRQ9UHK6 382 aa13.78□□□□□ -0.2
NDEL1-203ENST00000402554 ESYT3A0FGR9 886 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms