RNA–Protein interactions for RNA: ENST00000399606.5

CACNA1C-210, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-210ENST00000399606 ZNF746Q6NUN9 644 aaPredicted RBP11.39□□□□□ -0.59
CACNA1C-210ENST00000399606 SUGP1Q8IWZ8 645 aaKnown RBP11.39□□□□□ -0.59
CACNA1C-210ENST00000399606 TLE6Q9H808 572 aa11.39□□□□□ -0.59
CACNA1C-210ENST00000399606 ZMYND8Q9ULU4 1186 aaPredicted RBP11.39□□□□□ -0.59
CACNA1C-210ENST00000399606 FKBP9O95302 570 aa11.39□□□□□ -0.59
CACNA1C-210ENST00000399606 THP07101 528 aa11.39□□□□□ -0.59
CACNA1C-210ENST00000399606 RPS7P62081 194 aaKnown RBP11.39□□□□□ -0.59
CACNA1C-210ENST00000399606 USP39Q53GS9 565 aaKnown RBP11.39□□□□□ -0.59
CACNA1C-210ENST00000399606 CENPPQ6IPU0 288 aa11.39□□□□□ -0.59
CACNA1C-210ENST00000399606 FKBP9P1Q75LS8 142 aa11.39□□□□□ -0.59
CACNA1C-210ENST00000399606 TAF8Q7Z7C8 310 aa11.39□□□□□ -0.59
CACNA1C-210ENST00000399606 DHX40Q8IX18 779 aaKnown RBP11.39□□□□□ -0.59
CACNA1C-210ENST00000399606 DSELQ8IZU8 1212 aa11.39□□□□□ -0.59
CACNA1C-210ENST00000399606 INTS2Q9H0H0 1204 aaKnown RBP11.39□□□□□ -0.59
CACNA1C-210ENST00000399606 TLR8Q9NR97 1041 aaKnown RBP11.39□□□□□ -0.59
CACNA1C-210ENST00000399606 PARVAQ9NVD7 372 aa11.39□□□□□ -0.59
CACNA1C-210ENST00000399606 ANAPC2Q9UJX6 822 aa11.39□□□□□ -0.59
CACNA1C-210ENST00000399606 AURKCQ9UQB9 309 aa11.39□□□□□ -0.59
CACNA1C-210ENST00000399606 MSH3P20585 1137 aa11.38□□□□□ -0.59
CACNA1C-210ENST00000399606 XRCC4Q13426 336 aa11.38□□□□□ -0.59
CACNA1C-210ENST00000399606 BBS7Q8IWZ6 715 aa11.38□□□□□ -0.59
CACNA1C-210ENST00000399606 COLGALT2Q8IYK4 626 aa11.38□□□□□ -0.59
CACNA1C-210ENST00000399606 ZBED8Q8IZ13 594 aa11.38□□□□□ -0.59
CACNA1C-210ENST00000399606 DIS3LQ8TF46 1054 aaKnown RBP11.38□□□□□ -0.59
CACNA1C-210ENST00000399606 FAM129BQ96TA1 746 aa11.38□□□□□ -0.59
CACNA1C-210ENST00000399606 NT5C1AQ9BXI3 368 aa11.38□□□□□ -0.59
CACNA1C-210ENST00000399606 BRD9Q9H8M2 597 aa11.38□□□□□ -0.59
CACNA1C-210ENST00000399606 PRMT7Q9NVM4 692 aaPredicted RBP11.38□□□□□ -0.59
CACNA1C-210ENST00000399606 LSP1P33241 339 aa11.38□□□□□ -0.59
CACNA1C-210ENST00000399606 NT5C2P49902 561 aa11.38□□□□□ -0.59
CACNA1C-210ENST00000399606 INPP5AQ14642 412 aa11.38□□□□□ -0.59
CACNA1C-210ENST00000399606 CORO1BQ9BR76 489 aa11.38□□□□□ -0.59
CACNA1C-210ENST00000399606 TMEM245Q9H330 911 aa11.38□□□□□ -0.59
CACNA1C-210ENST00000399606 ABCB6Q9NP58 842 aa11.38□□□□□ -0.59
CACNA1C-210ENST00000399606 DPP3Q9NY33 737 aa11.38□□□□□ -0.59
CACNA1C-210ENST00000399606 RWDD2AQ9UIY3 292 aa11.38□□□□□ -0.59
CACNA1C-210ENST00000399606 MAN1B1Q9UKM7 699 aa11.38□□□□□ -0.59
CACNA1C-210ENST00000399606 EIF3DO15371 548 aaKnown RBP eCLIP11.38□□□□□ -0.59
CACNA1C-210ENST00000399606 KRT6AP02538 564 aa11.38□□□□□ -0.59
CACNA1C-210ENST00000399606 KRT6BP04259 564 aa11.38□□□□□ -0.59
CACNA1C-210ENST00000399606 PNPLA4P41247 253 aa11.38□□□□□ -0.59
CACNA1C-210ENST00000399606 ACADSBP45954 432 aa11.38□□□□□ -0.59
CACNA1C-210ENST00000399606 KRT6CP48668 564 aa11.38□□□□□ -0.59
CACNA1C-210ENST00000399606 UBXN2BQ14CS0 331 aa11.38□□□□□ -0.59
CACNA1C-210ENST00000399606 C6orf10Q5SRN2 563 aa11.38□□□□□ -0.59
CACNA1C-210ENST00000399606 OSBP2Q969R2 916 aa11.38□□□□□ -0.59
CACNA1C-210ENST00000399606 MRPL9Q9BYD2 267 aaKnown RBP11.38□□□□□ -0.59
CACNA1C-210ENST00000399606 QRICH2Q9H0J4 1663 aa11.38□□□□□ -0.59
CACNA1C-210ENST00000399606 C2orf81A6NN90 581 aa11.38□□□□□ -0.59
CACNA1C-210ENST00000399606 LARGE1O95461 756 aa11.38□□□□□ -0.59
CACNA1C-210ENST00000399606 IFNA16P05015 189 aa11.38□□□□□ -0.59
CACNA1C-210ENST00000399606 ACAP2Q15057 778 aa11.38□□□□□ -0.59
CACNA1C-210ENST00000399606 TTLL9Q3SXZ7 439 aa11.38□□□□□ -0.59
CACNA1C-210ENST00000399606 TTC23Q5W5X9 447 aa11.38□□□□□ -0.59
CACNA1C-210ENST00000399606 PPP2R2DQ66LE6 453 aa11.38□□□□□ -0.59
CACNA1C-210ENST00000399606 TRIM65Q6PJ69 517 aa11.38□□□□□ -0.59
CACNA1C-210ENST00000399606 CDR2LQ86X02 465 aaPredicted RBP11.38□□□□□ -0.59
CACNA1C-210ENST00000399606 COL23A1Q86Y22 540 aaPredicted RBP11.38□□□□□ -0.59
CACNA1C-210ENST00000399606 ZNF579Q8NAF0 562 aaKnown RBP11.38□□□□□ -0.59
CACNA1C-210ENST00000399606 BLOC1S5Q8TDH9 187 aa11.38□□□□□ -0.59
CACNA1C-210ENST00000399606 MED8Q96G25 268 aa11.38□□□□□ -0.59
CACNA1C-210ENST00000399606 WDCPQ9H6R7 721 aa11.38□□□□□ -0.59
CACNA1C-210ENST00000399606 ELOVL2Q9NXB9 296 aa11.38□□□□□ -0.59
CACNA1C-210ENST00000399606 A2ML1A8K2U0 1454 aa11.38□□□□□ -0.59
CACNA1C-210ENST00000399606 CBX4O00257 560 aa11.38□□□□□ -0.59
CACNA1C-210ENST00000399606 KPNA3O00505 521 aaPredicted RBP11.38□□□□□ -0.59
CACNA1C-210ENST00000399606 SRBD1Q8N5C6 995 aaKnown RBP11.38□□□□□ -0.59
CACNA1C-210ENST00000399606 ZNF564Q8TBZ8 553 aaPredicted RBP11.38□□□□□ -0.59
CACNA1C-210ENST00000399606 ARNTL2Q8WYA1 636 aa11.38□□□□□ -0.59
CACNA1C-210ENST00000399606 TSPAN17Q96FV3 270 aa11.38□□□□□ -0.59
CACNA1C-210ENST00000399606 VCPKMTQ9H867 229 aa11.38□□□□□ -0.59
CACNA1C-210ENST00000399606 EXOSC4Q9NPD3 245 aaKnown RBP11.38□□□□□ -0.59
CACNA1C-210ENST00000399606 DNAJC11Q9NVH1 559 aa11.38□□□□□ -0.59
CACNA1C-210ENST00000399606 ENTPD3O75355 529 aa11.38□□□□□ -0.59
CACNA1C-210ENST00000399606 ANXA11P50995 505 aaKnown RBP11.38□□□□□ -0.59
CACNA1C-210ENST00000399606 CORO7P57737 925 aa11.38□□□□□ -0.59
CACNA1C-210ENST00000399606 DMPKQ09013 629 aa11.38□□□□□ -0.59
CACNA1C-210ENST00000399606 USP50Q70EL3 339 aaPredicted RBP11.38□□□□□ -0.59
CACNA1C-210ENST00000399606 SETD3Q86TU7 594 aaPredicted RBP11.38□□□□□ -0.59
CACNA1C-210ENST00000399606 SYBUQ9NX95 663 aa11.38□□□□□ -0.59
CACNA1C-210ENST00000399606 WBP11Q9Y2W2 641 aaKnown RBP11.38□□□□□ -0.59
CACNA1C-210ENST00000399606 DAGLAQ9Y4D2 1042 aa11.38□□□□□ -0.59
CACNA1C-210ENST00000399606 CCR4P51679 360 aa11.37□□□□□ -0.59
CACNA1C-210ENST00000399606 GPC5P78333 572 aa11.37□□□□□ -0.59
CACNA1C-210ENST00000399606 COASYQ13057 564 aa11.37□□□□□ -0.59
CACNA1C-210ENST00000399606 EPHA7Q15375 998 aa11.37□□□□□ -0.59
CACNA1C-210ENST00000399606 CXorf40AQ8TE69 158 aa11.37□□□□□ -0.59
CACNA1C-210ENST00000399606 ZNF558Q96NG5 402 aa11.37□□□□□ -0.59
CACNA1C-210ENST00000399606 C17orf80Q9BSJ5 609 aa11.37□□□□□ -0.59
CACNA1C-210ENST00000399606 MPP6Q9NZW5 540 aa11.37□□□□□ -0.59
CACNA1C-210ENST00000399606 LRCH1Q9Y2L9 728 aa11.37□□□□□ -0.59
CACNA1C-210ENST00000399606 GLI2P10070 1586 aa11.37□□□□□ -0.59
CACNA1C-210ENST00000399606 EIF3EP60228 445 aaKnown RBP11.37□□□□□ -0.59
CACNA1C-210ENST00000399606 RAB14P61106 215 aa11.37□□□□□ -0.59
CACNA1C-210ENST00000399606 ACTR2P61160 394 aa11.37□□□□□ -0.59
CACNA1C-210ENST00000399606 KIF23Q02241 960 aaPredicted RBP11.37□□□□□ -0.59
CACNA1C-210ENST00000399606 GPS1Q13098 491 aa11.37□□□□□ -0.59
CACNA1C-210ENST00000399606 STILQ15468 1287 aa11.37□□□□□ -0.59
CACNA1C-210ENST00000399606 TPGS1Q6ZTW0 290 aa11.37□□□□□ -0.59
CACNA1C-210ENST00000399606 PDGFDQ9GZP0 370 aaPredicted RBP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms