RNA–Protein interactions for RNA: ENST00000398969.7

COL13A1-203, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-203ENST00000398969 ERO1BQ86YB8 467 aa26.78■■□□□ 1.88
COL13A1-203ENST00000398969 PALM2Q8IXS6 379 aa26.78■■□□□ 1.88
COL13A1-203ENST00000398969 ANKRD13AQ8IZ07 590 aa26.78■■□□□ 1.88
COL13A1-203ENST00000398969 EMC1Q8N766 993 aa26.78■■□□□ 1.88
COL13A1-203ENST00000398969 BANPQ8N9N5 519 aa26.78■■□□□ 1.88
COL13A1-203ENST00000398969 SLC5A4Q9NY91 659 aa26.78■■□□□ 1.88
COL13A1-203ENST00000398969 A0A0G2JLL6 359 aaPredicted RBP26.77■■□□□ 1.88
COL13A1-203ENST00000398969 CBX6O95503 412 aa26.77■■□□□ 1.88
COL13A1-203ENST00000398969 CCNG1P51959 295 aa26.77■■□□□ 1.88
COL13A1-203ENST00000398969 LAMTOR4Q0VGL1 99 aa26.77■■□□□ 1.88
COL13A1-203ENST00000398969 SEPT7Q16181 437 aaKnown RBP26.77■■□□□ 1.88
COL13A1-203ENST00000398969 BBS9Q3SYG4 887 aa26.77■■□□□ 1.88
COL13A1-203ENST00000398969 TAF1BQ53T94 588 aaPredicted RBP26.77■■□□□ 1.88
COL13A1-203ENST00000398969 PRRT2Q7Z6L0 340 aaPredicted RBP26.77■■□□□ 1.88
COL13A1-203ENST00000398969 KIRREL3Q8IZU9 778 aa26.77■■□□□ 1.88
COL13A1-203ENST00000398969 TBC1D10AQ9BXI6 508 aa26.77■■□□□ 1.88
COL13A1-203ENST00000398969 METTL5Q9NRN9 209 aaKnown RBP26.77■■□□□ 1.88
COL13A1-203ENST00000398969 BTBD7Q9P203 1132 aa26.77■■□□□ 1.88
COL13A1-203ENST00000398969 NXF1Q9UBU9 619 aaKnown RBP26.77■■□□□ 1.88
COL13A1-203ENST00000398969 XPO7Q9UIA9 1087 aaKnown RBP26.77■■□□□ 1.88
COL13A1-203ENST00000398969 WDR91A4D1P6 747 aa26.77■■□□□ 1.88
COL13A1-203ENST00000398969 TM9SF1O15321 606 aa26.77■■□□□ 1.88
COL13A1-203ENST00000398969 RAP1GAPP47736 663 aa26.77■■□□□ 1.88
COL13A1-203ENST00000398969 PLEKHG4Q58EX7 1191 aa26.77■■□□□ 1.88
COL13A1-203ENST00000398969 IER5Q5VY09 327 aa26.77■■□□□ 1.88
COL13A1-203ENST00000398969 PDIK1LQ8N165 341 aa26.77■■□□□ 1.88
COL13A1-203ENST00000398969 FAM13CQ8NE31 585 aa26.77■■□□□ 1.88
COL13A1-203ENST00000398969 ZNF398Q8TD17 642 aa26.77■■□□□ 1.88
COL13A1-203ENST00000398969 CPXM1Q96SM3 734 aa26.77■■□□□ 1.88
COL13A1-203ENST00000398969 MED7O43513 233 aa26.76■■□□□ 1.87
COL13A1-203ENST00000398969 TCF7P36402 384 aaPredicted RBP26.76■■□□□ 1.87
COL13A1-203ENST00000398969 ANKRD20A2Q5SQ80 823 aa26.76■■□□□ 1.87
COL13A1-203ENST00000398969 ANKRD20A1Q5TYW2 823 aa26.76■■□□□ 1.87
COL13A1-203ENST00000398969 ANKRD20A3Q5VUR7 823 aa26.76■■□□□ 1.87
COL13A1-203ENST00000398969 XYLT1Q86Y38 959 aa26.76■■□□□ 1.87
COL13A1-203ENST00000398969 RFX6Q8HWS3 928 aa26.76■■□□□ 1.87
COL13A1-203ENST00000398969 FAM71DQ8N9W8 422 aa26.76■■□□□ 1.87
COL13A1-203ENST00000398969 RNF149Q8NC42 400 aa26.76■■□□□ 1.87
COL13A1-203ENST00000398969 KCTD6Q8NC69 237 aa26.76■■□□□ 1.87
COL13A1-203ENST00000398969 ALKBH8Q96BT7 664 aaKnown RBP26.76■■□□□ 1.87
COL13A1-203ENST00000398969 C12orf65Q9H3J6 166 aaKnown RBP26.76■■□□□ 1.87
COL13A1-203ENST00000398969 SLC17A7Q9P2U7 560 aa26.76■■□□□ 1.87
COL13A1-203ENST00000398969 PCSK1NQ9UHG2 260 aa26.76■■□□□ 1.87
COL13A1-203ENST00000398969 ZFP69BQ9UJL9 534 aa26.76■■□□□ 1.87
COL13A1-203ENST00000398969 GOLGA8RI6L899 631 aa26.76■■□□□ 1.87
COL13A1-203ENST00000398969 APOC4-APOC2K7ER74 178 aa26.76■■□□□ 1.87
COL13A1-203ENST00000398969 SMAPO00193 183 aa26.76■■□□□ 1.87
COL13A1-203ENST00000398969 TRAFD1O14545 582 aaPredicted RBP26.76■■□□□ 1.87
COL13A1-203ENST00000398969 TNNC2P02585 160 aa26.76■■□□□ 1.87
COL13A1-203ENST00000398969 APOC2P02655 101 aa26.76■■□□□ 1.87
COL13A1-203ENST00000398969 RASSF2P50749 326 aa26.76■■□□□ 1.87
COL13A1-203ENST00000398969 EIF3EP60228 445 aaKnown RBP26.76■■□□□ 1.87
COL13A1-203ENST00000398969 LONP2Q86WA8 852 aa26.76■■□□□ 1.87
COL13A1-203ENST00000398969 ZBTB8OSQ8IWT0 167 aa26.76■■□□□ 1.87
COL13A1-203ENST00000398969 KLF6Q99612 283 aaPredicted RBP26.76■■□□□ 1.87
COL13A1-203ENST00000398969 NKX1-2Q9UD57 310 aaPredicted RBP26.76■■□□□ 1.87
COL13A1-203ENST00000398969 ERBB2P04626 1255 aa26.75■■□□□ 1.87
COL13A1-203ENST00000398969 CMASQ8NFW8 434 aaPredicted RBP26.75■■□□□ 1.87
COL13A1-203ENST00000398969 VPS11Q9H270 941 aa26.75■■□□□ 1.87
COL13A1-203ENST00000398969 DONSONQ9NYP3 566 aa26.75■■□□□ 1.87
COL13A1-203ENST00000398969 TROVE2P10155 538 aaKnown RBP eCLIP26.74■■□□□ 1.87
COL13A1-203ENST00000398969 TSHRP16473 764 aa26.74■■□□□ 1.87
COL13A1-203ENST00000398969 BASP1P80723 227 aaKnown RBP26.74■■□□□ 1.87
COL13A1-203ENST00000398969 RNASELQ05823 741 aaKnown RBP26.74■■□□□ 1.87
COL13A1-203ENST00000398969 TTLL12Q14166 644 aaPredicted RBP26.74■■□□□ 1.87
COL13A1-203ENST00000398969 TAF5Q15542 800 aa26.74■■□□□ 1.87
COL13A1-203ENST00000398969 SMYD5Q6GMV2 418 aa26.74■■□□□ 1.87
COL13A1-203ENST00000398969 RIOX2Q8IUF8 465 aa26.74■■□□□ 1.87
COL13A1-203ENST00000398969 ANKRD36BP1Q96IX9 119 aa26.74■■□□□ 1.87
COL13A1-203ENST00000398969 RNPEPL1Q9HAU8 725 aa26.74■■□□□ 1.87
COL13A1-203ENST00000398969 WDR35Q9P2L0 1181 aa26.74■■□□□ 1.87
COL13A1-203ENST00000398969 KANSL3Q9P2N6 904 aa26.74■■□□□ 1.87
COL13A1-203ENST00000398969 NUMBLQ9Y6R0 609 aa26.74■■□□□ 1.87
COL13A1-203ENST00000398969 SPDYE5A6NIY4 337 aa26.74■■□□□ 1.87
COL13A1-203ENST00000398969 CXCL11O14625 94 aa26.74■■□□□ 1.87
COL13A1-203ENST00000398969 B4GALT4O60513 344 aa26.74■■□□□ 1.87
COL13A1-203ENST00000398969 PEX11AO75192 247 aa26.74■■□□□ 1.87
COL13A1-203ENST00000398969 PROZP22891 400 aa26.74■■□□□ 1.87
COL13A1-203ENST00000398969 EPHB2P29323 1055 aa26.74■■□□□ 1.87
COL13A1-203ENST00000398969 RAD23BP54727 409 aa26.74■■□□□ 1.87
COL13A1-203ENST00000398969 OSTNP61366 133 aa26.74■■□□□ 1.87
COL13A1-203ENST00000398969 MTDHQ86UE4 582 aaKnown RBP26.74■■□□□ 1.87
COL13A1-203ENST00000398969 SYNCQ9H7C4 482 aa26.74■■□□□ 1.87
COL13A1-203ENST00000398969 BATF3Q9NR55 127 aa26.74■■□□□ 1.87
COL13A1-203ENST00000398969 CHMP2BQ9UQN3 213 aa26.74■■□□□ 1.87
COL13A1-203ENST00000398969 A0A0G2JMZ2 1700 aa26.73■■□□□ 1.87
COL13A1-203ENST00000398969 MIPP30301 263 aa26.73■■□□□ 1.87
COL13A1-203ENST00000398969 DPYSL3Q14195 570 aa26.73■■□□□ 1.87
COL13A1-203ENST00000398969 MPZL3Q6UWV2 235 aa26.73■■□□□ 1.87
COL13A1-203ENST00000398969 IGDCC3Q8IVU1 814 aa26.73■■□□□ 1.87
COL13A1-203ENST00000398969 LRRC71Q8N4P6 559 aa26.73■■□□□ 1.87
COL13A1-203ENST00000398969 RFWD2Q8NHY2 731 aa26.73■■□□□ 1.87
COL13A1-203ENST00000398969 SEPT1Q8WYJ6 367 aa26.73■■□□□ 1.87
COL13A1-203ENST00000398969 HSPH1Q92598 858 aa26.73■■□□□ 1.87
COL13A1-203ENST00000398969 SUFUQ9UMX1 484 aa26.73■■□□□ 1.87
COL13A1-203ENST00000398969 MCF2LO15068 1137 aa26.73■■□□□ 1.87
COL13A1-203ENST00000398969 RBP3P10745 1247 aa26.73■■□□□ 1.87
COL13A1-203ENST00000398969 GM2AP17900 193 aa26.73■■□□□ 1.87
COL13A1-203ENST00000398969 NRLP54845 237 aa26.73■■□□□ 1.87
COL13A1-203ENST00000398969 ORC1Q13415 861 aa26.73■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms