RNA–Protein interactions for RNA: ENST00000397411.6

TSPAN4-207, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,025 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-207ENST00000397411 PPP1R26Q5T8A7 1209 aaPredicted RBP26.87■■□□□ 1.89
TSPAN4-207ENST00000397411 CDKAL1Q5VV42 579 aa26.87■■□□□ 1.89
TSPAN4-207ENST00000397411 PHLDB3Q6NSJ2 640 aa26.87■■□□□ 1.89
TSPAN4-207ENST00000397411 TRIM65Q6PJ69 517 aa26.87■■□□□ 1.89
TSPAN4-207ENST00000397411 ENOSF1Q7L5Y1 443 aa26.87■■□□□ 1.89
TSPAN4-207ENST00000397411 KAT5Q92993 513 aa26.87■■□□□ 1.89
TSPAN4-207ENST00000397411 JAKMIP2Q96AA8 810 aa26.87■■□□□ 1.89
TSPAN4-207ENST00000397411 SMOQ99835 787 aa26.87■■□□□ 1.89
TSPAN4-207ENST00000397411 TRPM5Q9NZQ8 1165 aa26.87■■□□□ 1.89
TSPAN4-207ENST00000397411 ZMYM5Q9UJ78 669 aa26.87■■□□□ 1.89
TSPAN4-207ENST00000397411 KIAA1257Q9ULG3 409 aa26.87■■□□□ 1.89
TSPAN4-207ENST00000397411 DPYSL4O14531 572 aa26.86■■□□□ 1.89
TSPAN4-207ENST00000397411 VDRP11473 427 aa26.86■■□□□ 1.89
TSPAN4-207ENST00000397411 PON1P27169 355 aa26.86■■□□□ 1.89
TSPAN4-207ENST00000397411 YWHAQP27348 245 aa26.86■■□□□ 1.89
TSPAN4-207ENST00000397411 MIIPQ5JXC2 388 aa26.86■■□□□ 1.89
TSPAN4-207ENST00000397411 STXBP5Q5T5C0 1151 aa26.86■■□□□ 1.89
TSPAN4-207ENST00000397411 GPIHBP1Q8IV16 184 aa26.86■■□□□ 1.89
TSPAN4-207ENST00000397411 ASB16Q96NS5 453 aa26.86■■□□□ 1.89
TSPAN4-207ENST00000397411 TMEM30AQ9NV96 361 aa26.86■■□□□ 1.89
TSPAN4-207ENST00000397411 GREB1Q4ZG55 1949 aa26.86■■□□□ 1.89
TSPAN4-207ENST00000397411 BDP1A6H8Y1 2624 aa26.86■■□□□ 1.89
TSPAN4-207ENST00000397411 BECN2A8MW95 431 aa26.85■■□□□ 1.89
TSPAN4-207ENST00000397411 ABL1P00519 1130 aa26.85■■□□□ 1.89
TSPAN4-207ENST00000397411 DDX6P26196 483 aaKnown RBP eCLIP26.85■■□□□ 1.891e-6■■■■□ 21.2
TSPAN4-207ENST00000397411 KRT31Q15323 416 aa26.85■■□□□ 1.89
TSPAN4-207ENST00000397411 ARHGAP44Q17R89 818 aa26.85■■□□□ 1.89
TSPAN4-207ENST00000397411 FKBP15Q5T1M5 1219 aa26.85■■□□□ 1.89
TSPAN4-207ENST00000397411 TANGO2Q6ICL3 276 aa26.85■■□□□ 1.89
TSPAN4-207ENST00000397411 MAB21L3Q8N8X9 362 aa26.85■■□□□ 1.89
TSPAN4-207ENST00000397411 ELSPBP1Q96BH3 223 aa26.85■■□□□ 1.89
TSPAN4-207ENST00000397411 SLITRK1Q96PX8 696 aa26.85■■□□□ 1.89
TSPAN4-207ENST00000397411 RPP25Q9BUL9 199 aaKnown RBP26.85■■□□□ 1.89
TSPAN4-207ENST00000397411 DUSP16Q9BY84 665 aa26.85■■□□□ 1.89
TSPAN4-207ENST00000397411 TRPC7Q9HCX4 862 aa26.85■■□□□ 1.89
TSPAN4-207ENST00000397411 HESX1Q9UBX0 185 aa26.85■■□□□ 1.89
TSPAN4-207ENST00000397411 APEX2Q9UBZ4 518 aa26.85■■□□□ 1.89
TSPAN4-207ENST00000397411 ZNF638Q14966 1978 aaKnown RBP26.85■■□□□ 1.89
TSPAN4-207ENST00000397411 CUL9Q8IWT3 2517 aa26.85■■□□□ 1.89
TSPAN4-207ENST00000397411 ECI2O75521 394 aa26.84■■□□□ 1.89
TSPAN4-207ENST00000397411 BEST1O76090 585 aa26.84■■□□□ 1.89
TSPAN4-207ENST00000397411 PAEPP09466 180 aa26.84■■□□□ 1.89
TSPAN4-207ENST00000397411 ACO1P21399 889 aaKnown RBP26.84■■□□□ 1.89
TSPAN4-207ENST00000397411 AVPR1AP37288 418 aa26.84■■□□□ 1.89
TSPAN4-207ENST00000397411 USP8P40818 1118 aa26.84■■□□□ 1.89
TSPAN4-207ENST00000397411 PPP3CCP48454 512 aa26.84■■□□□ 1.89
TSPAN4-207ENST00000397411 ZNF165P49910 485 aa26.84■■□□□ 1.89
TSPAN4-207ENST00000397411 USP46P62068 366 aa26.84■■□□□ 1.89
TSPAN4-207ENST00000397411 ARHGAP17Q68EM7 881 aa26.84■■□□□ 1.89
TSPAN4-207ENST00000397411 TXNDC8Q6A555 127 aa26.84■■□□□ 1.89
TSPAN4-207ENST00000397411 GJB7Q6PEY0 223 aa26.84■■□□□ 1.89
TSPAN4-207ENST00000397411 POTEHQ6S545 545 aa26.84■■□□□ 1.89
TSPAN4-207ENST00000397411 ARID3BQ8IVW6 561 aaPredicted RBP26.84■■□□□ 1.89
TSPAN4-207ENST00000397411 UBR7Q8N806 425 aa26.84■■□□□ 1.89
TSPAN4-207ENST00000397411 RBBP8NLQ8NC74 664 aaPredicted RBP26.84■■□□□ 1.89
TSPAN4-207ENST00000397411 FBXO32Q969P5 355 aa26.84■■□□□ 1.89
TSPAN4-207ENST00000397411 E2F7Q96AV8 911 aa26.84■■□□□ 1.89
TSPAN4-207ENST00000397411 KREMEN1Q96MU8 473 aa26.84■■□□□ 1.89
TSPAN4-207ENST00000397411 BPIFA3Q9BQP9 254 aa26.84■■□□□ 1.89
TSPAN4-207ENST00000397411 C1QTNF1Q9BXJ1 281 aa26.84■■□□□ 1.89
TSPAN4-207ENST00000397411 CSNK1G1Q9HCP0 422 aa26.84■■□□□ 1.89
TSPAN4-207ENST00000397411 COMMD8Q9NX08 183 aa26.84■■□□□ 1.89
TSPAN4-207ENST00000397411 FBXL21Q9UKT6 434 aa26.84■■□□□ 1.89
TSPAN4-207ENST00000397411 NPR3P17342 541 aa26.83■■□□□ 1.89
TSPAN4-207ENST00000397411 VIPR2P41587 438 aa26.83■■□□□ 1.89
TSPAN4-207ENST00000397411 TAF10Q12962 218 aa26.83■■□□□ 1.89
TSPAN4-207ENST00000397411 TMEM150AQ86TG1 271 aa26.83■■□□□ 1.89
TSPAN4-207ENST00000397411 MON1AQ86VX9 555 aa26.83■■□□□ 1.89
TSPAN4-207ENST00000397411 YAF2Q8IY57 180 aa26.83■■□□□ 1.89
TSPAN4-207ENST00000397411 TTLL2Q9BWV7 592 aa26.83■■□□□ 1.89
TSPAN4-207ENST00000397411 SLC46A2Q9BY10 475 aa26.83■■□□□ 1.89
TSPAN4-207ENST00000397411 SMOC2Q9H3U7 446 aa26.83■■□□□ 1.89
TSPAN4-207ENST00000397411 DUSP12Q9UNI6 340 aa26.83■■□□□ 1.89
TSPAN4-207ENST00000397411 VCANP13611 3396 aa26.83■■□□□ 1.89
TSPAN4-207ENST00000397411 DENND4CQ5VZ89 1909 aa26.82■■□□□ 1.88
TSPAN4-207ENST00000397411 SOBPA7XYQ1 873 aa26.82■■□□□ 1.88
TSPAN4-207ENST00000397411 NARSO43776 548 aaKnown RBP26.82■■□□□ 1.88
TSPAN4-207ENST00000397411 SLC5A3P53794 718 aa26.82■■□□□ 1.88
TSPAN4-207ENST00000397411 SIGLEC14Q08ET2 396 aa26.82■■□□□ 1.88
TSPAN4-207ENST00000397411 GOLGA7BQ2TAP0 167 aa26.82■■□□□ 1.88
TSPAN4-207ENST00000397411 TRIM67Q6ZTA4 783 aa26.82■■□□□ 1.88
TSPAN4-207ENST00000397411 CLEC20AQ6ZU45 233 aa26.82■■□□□ 1.88
TSPAN4-207ENST00000397411 ANKRD52Q8NB46 1076 aa26.82■■□□□ 1.88
TSPAN4-207ENST00000397411 ZMIZ2Q8NF64 920 aa26.82■■□□□ 1.88
TSPAN4-207ENST00000397411 SCAMP5Q8TAC9 235 aa26.82■■□□□ 1.88
TSPAN4-207ENST00000397411 FBXO44Q9H4M3 255 aa26.82■■□□□ 1.88
TSPAN4-207ENST00000397411 TRAV19A0A0A6YYK7 116 aa26.81■■□□□ 1.88
TSPAN4-207ENST00000397411 RNF225M0QZC1 329 aaPredicted RBP26.81■■□□□ 1.88
TSPAN4-207ENST00000397411 SRFP11831 508 aa26.81■■□□□ 1.88
TSPAN4-207ENST00000397411 COPB1P53618 953 aaKnown RBP26.81■■□□□ 1.88
TSPAN4-207ENST00000397411 APBA1Q02410 837 aa26.81■■□□□ 1.88
TSPAN4-207ENST00000397411 NCAPHQ15003 741 aa26.81■■□□□ 1.88
TSPAN4-207ENST00000397411 ZSCAN23Q3MJ62 389 aa26.81■■□□□ 1.88
TSPAN4-207ENST00000397411 CMTM8Q8IZV2 173 aa26.81■■□□□ 1.88
TSPAN4-207ENST00000397411 PDZD8Q8NEN9 1154 aa26.81■■□□□ 1.88
TSPAN4-207ENST00000397411 PCMTD1Q96MG8 357 aaPredicted RBP26.81■■□□□ 1.88
TSPAN4-207ENST00000397411 PLA2G2FQ9BZM2 168 aa26.81■■□□□ 1.88
TSPAN4-207ENST00000397411 TRPV4Q9HBA0 871 aa26.81■■□□□ 1.88
TSPAN4-207ENST00000397411 LIMA1Q9UHB6 759 aaKnown RBP26.81■■□□□ 1.88
TSPAN4-207ENST00000397411 CHORDC1Q9UHD1 332 aaPredicted RBP26.81■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms