RNA–Protein interactions for RNA: ENST00000396060.6

GTF2A2-202, Transcript of general transcription factor IIA subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A2, Length 1,582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A2-202ENST00000396060 GPD1P21695 349 aa12.5□□□□□ -0.41
GTF2A2-202ENST00000396060 PSMA2P25787 234 aa12.5□□□□□ -0.41
GTF2A2-202ENST00000396060 ADORA2BP29275 332 aa12.5□□□□□ -0.41
GTF2A2-202ENST00000396060 BRCC3P46736 316 aa12.5□□□□□ -0.41
GTF2A2-202ENST00000396060 RGS7P49802 495 aa12.5□□□□□ -0.41
GTF2A2-202ENST00000396060 ATN1P54259 1190 aaPredicted RBP12.5□□□□□ -0.41
GTF2A2-202ENST00000396060 VSNL1P62760 191 aa12.5□□□□□ -0.41
GTF2A2-202ENST00000396060 MAPRE1Q15691 268 aaKnown RBP12.5□□□□□ -0.41
GTF2A2-202ENST00000396060 TAZQ16635 292 aa12.5□□□□□ -0.41
GTF2A2-202ENST00000396060 INTS6LQ5JSJ4 861 aaKnown RBP12.5□□□□□ -0.41
GTF2A2-202ENST00000396060 FAM102AQ5T9C2 384 aaPredicted RBP12.5□□□□□ -0.41
GTF2A2-202ENST00000396060 C8orf74Q6P047 294 aa12.5□□□□□ -0.41
GTF2A2-202ENST00000396060 POTEHQ6S545 545 aa12.5□□□□□ -0.41
GTF2A2-202ENST00000396060 MAATS1Q7Z4T9 603 aa12.5□□□□□ -0.41
GTF2A2-202ENST00000396060 ZDHHC14Q8IZN3 488 aa12.5□□□□□ -0.41
GTF2A2-202ENST00000396060 THEM5Q8N1Q8 247 aa12.5□□□□□ -0.41
GTF2A2-202ENST00000396060 SCML4Q8N228 414 aa12.5□□□□□ -0.41
GTF2A2-202ENST00000396060 CCDC26Q8TAB7 109 aa12.5□□□□□ -0.41
GTF2A2-202ENST00000396060 RBM41Q96IZ5 413 aaKnown RBP12.5□□□□□ -0.41
GTF2A2-202ENST00000396060 RUNDC3BQ96NL0 473 aa12.5□□□□□ -0.41
GTF2A2-202ENST00000396060 KRT12Q99456 494 aa12.5□□□□□ -0.41
GTF2A2-202ENST00000396060 TMEM175Q9BSA9 504 aa12.5□□□□□ -0.41
GTF2A2-202ENST00000396060 MRPL9Q9BYD2 267 aaKnown RBP12.5□□□□□ -0.41
GTF2A2-202ENST00000396060 CSNK1G1Q9HCP0 422 aa12.5□□□□□ -0.41
GTF2A2-202ENST00000396060 GDF3Q9NR23 364 aa12.5□□□□□ -0.41
GTF2A2-202ENST00000396060 DMGDHQ9UI17 866 aaKnown RBP12.5□□□□□ -0.41
GTF2A2-202ENST00000396060 MTUS1Q9ULD2 1270 aa12.5□□□□□ -0.41
GTF2A2-202ENST00000396060 NR2E1Q9Y466 385 aa12.5□□□□□ -0.41
GTF2A2-202ENST00000396060 KIAA0100Q14667 2235 aaKnown RBP12.5□□□□□ -0.41
GTF2A2-202ENST00000396060 MYBPHLA2RUH7 354 aa12.49□□□□□ -0.41
GTF2A2-202ENST00000396060 LRCH4O75427 683 aa12.49□□□□□ -0.41
GTF2A2-202ENST00000396060 FAM200BP0CF97 657 aa12.49□□□□□ -0.41
GTF2A2-202ENST00000396060 ACAT1P24752 427 aaKnown RBP12.49□□□□□ -0.41
GTF2A2-202ENST00000396060 CHRNA3P32297 505 aa12.49□□□□□ -0.41
GTF2A2-202ENST00000396060 CETN2P41208 172 aa12.49□□□□□ -0.41
GTF2A2-202ENST00000396060 PTPN9P43378 593 aa12.49□□□□□ -0.41
GTF2A2-202ENST00000396060 SLC25A11Q02978 314 aaKnown RBP12.49□□□□□ -0.41
GTF2A2-202ENST00000396060 KLF1Q13351 362 aaPredicted RBP12.49□□□□□ -0.41
GTF2A2-202ENST00000396060 HADHQ16836 314 aaKnown RBP12.49□□□□□ -0.41
GTF2A2-202ENST00000396060 MDH1BQ5I0G3 518 aa12.49□□□□□ -0.41
GTF2A2-202ENST00000396060 RAB41Q5JT25 222 aa12.49□□□□□ -0.41
GTF2A2-202ENST00000396060 EFHC1Q5JVL4 640 aa12.49□□□□□ -0.41
GTF2A2-202ENST00000396060 OVOS1Q6IE37 1185 aa12.49□□□□□ -0.41
GTF2A2-202ENST00000396060 CLEC20AQ6ZU45 233 aa12.49□□□□□ -0.41
GTF2A2-202ENST00000396060 PIGZQ86VD9 579 aa12.49□□□□□ -0.41
GTF2A2-202ENST00000396060 SCUBE3Q8IX30 993 aa12.49□□□□□ -0.41
GTF2A2-202ENST00000396060 PRELID2Q8N945 189 aa12.49□□□□□ -0.41
GTF2A2-202ENST00000396060 CMASQ8NFW8 434 aaPredicted RBP12.49□□□□□ -0.41
GTF2A2-202ENST00000396060 HDAC7Q8WUI4 952 aa12.49□□□□□ -0.41
GTF2A2-202ENST00000396060 RXFP2Q8WXD0 754 aa12.49□□□□□ -0.41
GTF2A2-202ENST00000396060 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.49□□□□□ -0.41
GTF2A2-202ENST00000396060 SEC14L1Q92503 715 aa12.49□□□□□ -0.41
GTF2A2-202ENST00000396060 CENPIQ92674 756 aaPredicted RBP12.49□□□□□ -0.41
GTF2A2-202ENST00000396060 VWCEQ96DN2 955 aa12.49□□□□□ -0.41
GTF2A2-202ENST00000396060 FAM193BQ96PV7 902 aaPredicted RBP12.49□□□□□ -0.41
GTF2A2-202ENST00000396060 C11orf84Q9BUA3 381 aaPredicted RBP12.49□□□□□ -0.41
GTF2A2-202ENST00000396060 AP1M1Q9BXS5 423 aa12.49□□□□□ -0.41
GTF2A2-202ENST00000396060 LRRC19Q9H756 370 aa12.49□□□□□ -0.41
GTF2A2-202ENST00000396060 HOMER3Q9NSC5 361 aa12.49□□□□□ -0.41
GTF2A2-202ENST00000396060 PCYOX1Q9UHG3 505 aa12.49□□□□□ -0.41
GTF2A2-202ENST00000396060 TIMM13Q9Y5L4 95 aaPredicted RBP12.49□□□□□ -0.41
GTF2A2-202ENST00000396060 FAM187AA6NFU0 413 aa12.48□□□□□ -0.41
GTF2A2-202ENST00000396060 PHF2O75151 1096 aa12.48□□□□□ -0.41
GTF2A2-202ENST00000396060 RNF8O76064 485 aa12.48□□□□□ -0.41
GTF2A2-202ENST00000396060 FBXO21O94952 628 aa12.48□□□□□ -0.41
GTF2A2-202ENST00000396060 ITGB1P05556 798 aa12.48□□□□□ -0.41
GTF2A2-202ENST00000396060 RARAP10276 462 aa12.48□□□□□ -0.41
GTF2A2-202ENST00000396060 PDGFRAP16234 1089 aa12.48□□□□□ -0.41
GTF2A2-202ENST00000396060 CYP2C18P33260 490 aa12.48□□□□□ -0.41
GTF2A2-202ENST00000396060 DHX34Q14147 1143 aaKnown RBP12.48□□□□□ -0.41
GTF2A2-202ENST00000396060 MRPL58Q14197 206 aaKnown RBP12.48□□□□□ -0.41
GTF2A2-202ENST00000396060 CCDC14Q49A88 953 aa12.48□□□□□ -0.41
GTF2A2-202ENST00000396060 BEND6Q5SZJ8 279 aaPredicted RBP12.48□□□□□ -0.41
GTF2A2-202ENST00000396060 TRNP1Q6NT89 227 aa12.48□□□□□ -0.41
GTF2A2-202ENST00000396060 AADACL2Q6P093 401 aa12.48□□□□□ -0.41
GTF2A2-202ENST00000396060 CNKSR3Q6P9H4 555 aa12.48□□□□□ -0.41
GTF2A2-202ENST00000396060 TMCO3Q6UWJ1 677 aa12.48□□□□□ -0.41
GTF2A2-202ENST00000396060 FAM35AQ86V20 835 aa12.48□□□□□ -0.41
GTF2A2-202ENST00000396060 IFT20Q8IY31 132 aa12.48□□□□□ -0.41
GTF2A2-202ENST00000396060 ABI1Q8IZP0 508 aa12.48□□□□□ -0.41
GTF2A2-202ENST00000396060 DIS3LQ8TF46 1054 aaKnown RBP12.48□□□□□ -0.41
GTF2A2-202ENST00000396060 SLCO2A1Q92959 643 aa12.48□□□□□ -0.41
GTF2A2-202ENST00000396060 PCED1BQ96HM7 432 aa12.48□□□□□ -0.41
GTF2A2-202ENST00000396060 SCLYQ96I15 445 aa12.48□□□□□ -0.41
GTF2A2-202ENST00000396060 DDX23Q9BUQ8 820 aaKnown RBP12.48□□□□□ -0.41
GTF2A2-202ENST00000396060 COLEC11Q9BWP8 271 aa12.48□□□□□ -0.41
GTF2A2-202ENST00000396060 C11orf49Q9H6J7 331 aa12.48□□□□□ -0.41
GTF2A2-202ENST00000396060 NRDE2Q9H7Z3 1164 aa12.48□□□□□ -0.41
GTF2A2-202ENST00000396060 ARFGAP3Q9NP61 516 aa12.48□□□□□ -0.41
GTF2A2-202ENST00000396060 PNPLA8Q9NP80 782 aa12.48□□□□□ -0.41
GTF2A2-202ENST00000396060 LRFN2Q9ULH4 789 aa12.48□□□□□ -0.41
GTF2A2-202ENST00000396060 USTQ9Y2C2 406 aa12.48□□□□□ -0.41
GTF2A2-202ENST00000396060 TSC2P49815 1807 aa12.48□□□□□ -0.41
GTF2A2-202ENST00000396060 KIAA0355O15063 1070 aa12.47□□□□□ -0.41
GTF2A2-202ENST00000396060 RAD51CO43502 376 aa12.47□□□□□ -0.41
GTF2A2-202ENST00000396060 ENDOD1O94919 500 aa12.47□□□□□ -0.41
GTF2A2-202ENST00000396060 TRUB2O95900 331 aaKnown RBP12.47□□□□□ -0.41
GTF2A2-202ENST00000396060 ALDH2P05091 517 aa12.47□□□□□ -0.41
GTF2A2-202ENST00000396060 CLTBP09497 229 aa12.47□□□□□ -0.41
GTF2A2-202ENST00000396060 TCF4P15884 667 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms