RNA–Protein interactions for RNA: ENST00000395194.1

COL11A2-204, Transcript of collagen type XI alpha 2 chain, humanhuman

TSL 1 (best) BASIC

Gene COL11A2, Length 1,194 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-204ENST00000395194 CNTNAP3BQ96NU0 1288 aa20.57■□□□□ 0.88
COL11A2-204ENST00000395194 FNBP1Q96RU3 617 aa20.57■□□□□ 0.88
COL11A2-204ENST00000395194 CNTNAP3Q9BZ76 1288 aa20.57■□□□□ 0.88
COL11A2-204ENST00000395194 LINC00597Q9H2U6 94 aa20.57■□□□□ 0.88
COL11A2-204ENST00000395194 AGPAT3Q9NRZ7 376 aa20.57■□□□□ 0.88
COL11A2-204ENST00000395194 LAMA1P25391 3075 aa20.57■□□□□ 0.88
COL11A2-204ENST00000395194 MAP1BP46821 2468 aaKnown RBP20.56■□□□□ 0.88
COL11A2-204ENST00000395194 CLSTN1O94985 981 aa20.56■□□□□ 0.88
COL11A2-204ENST00000395194 CST3P01034 146 aaPredicted RBP20.56■□□□□ 0.88
COL11A2-204ENST00000395194 AMPD3Q01432 767 aa20.56■□□□□ 0.88
COL11A2-204ENST00000395194 IFRD2Q12894 506 aaPredicted RBP20.56■□□□□ 0.88
COL11A2-204ENST00000395194 AASDHQ4L235 1098 aaPredicted RBP20.56■□□□□ 0.88
COL11A2-204ENST00000395194 PPM1JQ5JR12 505 aa20.56■□□□□ 0.88
COL11A2-204ENST00000395194 VSTM1Q6UX27 236 aa20.56■□□□□ 0.88
COL11A2-204ENST00000395194 HS2ST1Q7LGA3 356 aa20.56■□□□□ 0.88
COL11A2-204ENST00000395194 IQUBQ8NA54 791 aa20.56■□□□□ 0.88
COL11A2-204ENST00000395194 OR6B3Q8NGW1 331 aa20.56■□□□□ 0.88
COL11A2-204ENST00000395194 ZNF507Q8TCN5 953 aa20.56■□□□□ 0.88
COL11A2-204ENST00000395194 ATP2A3Q93084 1043 aa20.56■□□□□ 0.88
COL11A2-204ENST00000395194 CGRRF1Q99675 332 aa20.56■□□□□ 0.88
COL11A2-204ENST00000395194 SNX25Q9H3E2 840 aa20.56■□□□□ 0.88
COL11A2-204ENST00000395194 CUEDC2Q9H467 287 aa20.56■□□□□ 0.88
COL11A2-204ENST00000395194 DPEP3Q9H4B8 488 aa20.56■□□□□ 0.88
COL11A2-204ENST00000395194 SMOC1Q9H4F8 434 aa20.56■□□□□ 0.88
COL11A2-204ENST00000395194 KIAA1586Q9HCI6 787 aa20.56■□□□□ 0.88
COL11A2-204ENST00000395194 NUP205Q92621 2012 aa20.56■□□□□ 0.88
COL11A2-204ENST00000395194 THADAQ6YHU6 1953 aa20.55■□□□□ 0.88
COL11A2-204ENST00000395194 F8VP50 259 aa20.55■□□□□ 0.88
COL11A2-204ENST00000395194 POLR2DO15514 142 aaKnown RBP20.55■□□□□ 0.88
COL11A2-204ENST00000395194 CUTAO60888 179 aa20.55■□□□□ 0.88
COL11A2-204ENST00000395194 ABL1P00519 1130 aa20.55■□□□□ 0.88
COL11A2-204ENST00000395194 CACNA2D1P54289 1103 aa20.55■□□□□ 0.88
COL11A2-204ENST00000395194 ZXDBP98169 803 aa20.55■□□□□ 0.88
COL11A2-204ENST00000395194 CYP24A1Q07973 514 aa20.55■□□□□ 0.88
COL11A2-204ENST00000395194 CACNA2D4Q7Z3S7 1137 aa20.55■□□□□ 0.88
COL11A2-204ENST00000395194 MYCBPAPQ8TBZ2 947 aa20.55■□□□□ 0.88
COL11A2-204ENST00000395194 SCFD1Q8WVM8 642 aa20.55■□□□□ 0.88
COL11A2-204ENST00000395194 SPATA17Q96L03 361 aa20.55■□□□□ 0.88
COL11A2-204ENST00000395194 BACH2Q9BYV9 841 aa20.55■□□□□ 0.88
COL11A2-204ENST00000395194 TRPM5Q9NZQ8 1165 aa20.55■□□□□ 0.88
COL11A2-204ENST00000395194 ARHGAP26Q9UNA1 814 aa20.55■□□□□ 0.88
COL11A2-204ENST00000395194 MYO18AQ92614 2054 aaKnown RBP20.55■□□□□ 0.88
COL11A2-204ENST00000395194 ANTXRLA6NF34 631 aa20.54■□□□□ 0.88
COL11A2-204ENST00000395194 YEATS4O95619 227 aa20.54■□□□□ 0.88
COL11A2-204ENST00000395194 GNL1P36915 607 aaPredicted RBP20.54■□□□□ 0.88
COL11A2-204ENST00000395194 SEC13P55735 322 aa20.54■□□□□ 0.88
COL11A2-204ENST00000395194 TNNC1P63316 161 aa20.54■□□□□ 0.88
COL11A2-204ENST00000395194 PSMD6Q15008 389 aa20.54■□□□□ 0.88
COL11A2-204ENST00000395194 MAPRE1Q15691 268 aaKnown RBP20.54■□□□□ 0.88
COL11A2-204ENST00000395194 WDR72Q3MJ13 1102 aa20.54■□□□□ 0.88
COL11A2-204ENST00000395194 UNC13DQ70J99 1090 aa20.54■□□□□ 0.88
COL11A2-204ENST00000395194 XXYLT1Q8NBI6 393 aa20.54■□□□□ 0.88
COL11A2-204ENST00000395194 ELMO3Q96BJ8 720 aa20.54■□□□□ 0.88
COL11A2-204ENST00000395194 C7orf25Q9BPX7 421 aa20.54■□□□□ 0.88
COL11A2-204ENST00000395194 ZNF518BQ9C0D4 1074 aa20.54■□□□□ 0.88
COL11A2-204ENST00000395194 SLC39A2Q9NP94 309 aa20.54■□□□□ 0.88
COL11A2-204ENST00000395194 RXFP3Q9NSD7 469 aa20.54■□□□□ 0.88
COL11A2-204ENST00000395194 TMEM30AQ9NV96 361 aa20.54■□□□□ 0.88
COL11A2-204ENST00000395194 SMPD4Q9NXE4 827 aa20.54■□□□□ 0.88
COL11A2-204ENST00000395194 NXF1Q9UBU9 619 aaKnown RBP20.54■□□□□ 0.88
COL11A2-204ENST00000395194 LEFTY2O00292 366 aa20.53■□□□□ 0.88
COL11A2-204ENST00000395194 CLDN5O00501 218 aa20.53■□□□□ 0.88
COL11A2-204ENST00000395194 TRIM66O15016 1216 aa20.53■□□□□ 0.88
COL11A2-204ENST00000395194 DCLK1O15075 740 aa20.53■□□□□ 0.88
COL11A2-204ENST00000395194 EPN2O95208 641 aa20.53■□□□□ 0.88
COL11A2-204ENST00000395194 AFMP43652 599 aa20.53■□□□□ 0.88
COL11A2-204ENST00000395194 CASP4P49662 377 aa20.53■□□□□ 0.88
COL11A2-204ENST00000395194 NR1H3Q13133 447 aa20.53■□□□□ 0.88
COL11A2-204ENST00000395194 DMC1Q14565 340 aa20.53■□□□□ 0.88
COL11A2-204ENST00000395194 FBXO43Q4G163 708 aa20.53■□□□□ 0.88
COL11A2-204ENST00000395194 GRAMD1CQ8IYS0 662 aa20.53■□□□□ 0.88
COL11A2-204ENST00000395194 C12orf50Q8NA57 414 aaPredicted RBP20.53■□□□□ 0.88
COL11A2-204ENST00000395194 ZNF516Q92618 1163 aa20.53■□□□□ 0.88
COL11A2-204ENST00000395194 EXOC4Q96A65 974 aa20.53■□□□□ 0.88
COL11A2-204ENST00000395194 UBE4BO95155 1302 aa20.53■□□□□ 0.88
COL11A2-204ENST00000395194 CCDC163A0A0D9SF12 145 aa20.52■□□□□ 0.88
COL11A2-204ENST00000395194 NFATC1O95644 943 aa20.52■□□□□ 0.88
COL11A2-204ENST00000395194 PTPN1P18031 435 aaKnown RBP20.52■□□□□ 0.88
COL11A2-204ENST00000395194 RAP1GAPP47736 663 aa20.52■□□□□ 0.88
COL11A2-204ENST00000395194 MYL6P60660 151 aa20.52■□□□□ 0.88
COL11A2-204ENST00000395194 TRPC3Q13507 836 aa20.52■□□□□ 0.88
COL11A2-204ENST00000395194 CUL4BQ13620 913 aa20.52■□□□□ 0.88
COL11A2-204ENST00000395194 CAMKK1Q8N5S9 505 aa20.52■□□□□ 0.88
COL11A2-204ENST00000395194 RNF38Q9H0F5 515 aa20.52■□□□□ 0.88
COL11A2-204ENST00000395194 GZF1Q9H116 711 aaPredicted RBP20.52■□□□□ 0.88
COL11A2-204ENST00000395194 INVSQ9Y283 1065 aa20.52■□□□□ 0.88
COL11A2-204ENST00000395194 CPQQ9Y646 472 aa20.52■□□□□ 0.88
COL11A2-204ENST00000395194 ZNF840PA6NDX5 716 aa20.51■□□□□ 0.87
COL11A2-204ENST00000395194 A8MXQ7 604 aa20.51■□□□□ 0.87
COL11A2-204ENST00000395194 TACC1O75410 805 aa20.51■□□□□ 0.87
COL11A2-204ENST00000395194 ADRB1P08588 477 aa20.51■□□□□ 0.87
COL11A2-204ENST00000395194 OPRD1P41143 372 aa20.51■□□□□ 0.87
COL11A2-204ENST00000395194 PDE6CP51160 858 aa20.51■□□□□ 0.87
COL11A2-204ENST00000395194 EHHADHQ08426 723 aa20.51■□□□□ 0.87
COL11A2-204ENST00000395194 TAF10Q12962 218 aa20.51■□□□□ 0.87
COL11A2-204ENST00000395194 C2orf27AQ580R0 203 aa20.51■□□□□ 0.87
COL11A2-204ENST00000395194 CNNM4Q6P4Q7 775 aa20.51■□□□□ 0.87
COL11A2-204ENST00000395194 SCARA5Q6ZMJ2 495 aa20.51■□□□□ 0.87
COL11A2-204ENST00000395194 SYT13Q7L8C5 426 aa20.51■□□□□ 0.87
COL11A2-204ENST00000395194 FILIP1Q7Z7B0 1213 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms