RNA–Protein interactions for RNA: ENST00000394801.8

UBE2D3-207, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,368 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-207ENST00000394801 CYP4V2Q6ZWL3 525 aaPredicted RBP16.07■□□□□ 0.16
UBE2D3-207ENST00000394801 CENPUQ71F23 418 aa16.07■□□□□ 0.16
UBE2D3-207ENST00000394801 CCT6BQ92526 530 aa16.07■□□□□ 0.16
UBE2D3-207ENST00000394801 PPCSQ9HAB8 311 aa16.07■□□□□ 0.16
UBE2D3-207ENST00000394801 GDF10P55107 478 aa16.07■□□□□ 0.16
UBE2D3-207ENST00000394801 ACTN3Q08043 901 aaPredicted RBP16.07■□□□□ 0.16
UBE2D3-207ENST00000394801 PCBP1Q15365 356 aaKnown RBP eCLIP16.07■□□□□ 0.169e-7■□□□□ 10.8
UBE2D3-207ENST00000394801 TAF5Q15542 800 aa16.07■□□□□ 0.16
UBE2D3-207ENST00000394801 TRNP1Q6NT89 227 aa16.07■□□□□ 0.16
UBE2D3-207ENST00000394801 APBB1IPQ7Z5R6 666 aaPredicted RBP16.07■□□□□ 0.16
UBE2D3-207ENST00000394801 PPIL6Q8IXY8 311 aa16.07■□□□□ 0.16
UBE2D3-207ENST00000394801 NAT8LQ8N9F0 302 aa16.07■□□□□ 0.16
UBE2D3-207ENST00000394801 OR6J1Q8NGC5 347 aa16.07■□□□□ 0.16
UBE2D3-207ENST00000394801 KAT2BQ92831 832 aa16.07■□□□□ 0.16
UBE2D3-207ENST00000394801 KDM4CQ9H3R0 1056 aa16.07■□□□□ 0.16
UBE2D3-207ENST00000394801 ACTR5Q9H9F9 607 aaPredicted RBP16.07■□□□□ 0.16
UBE2D3-207ENST00000394801 E5RJQ4 531 aa16.06■□□□□ 0.16
UBE2D3-207ENST00000394801 SMAPO00193 183 aa16.06■□□□□ 0.16
UBE2D3-207ENST00000394801 GPR32O75388 356 aa16.06■□□□□ 0.16
UBE2D3-207ENST00000394801 IFNAR2P48551 515 aa16.06■□□□□ 0.16
UBE2D3-207ENST00000394801 FASTKD3Q14CZ7 662 aaKnown RBP16.06■□□□□ 0.16
UBE2D3-207ENST00000394801 KIZQ2M2Z5 673 aa16.06■□□□□ 0.16
UBE2D3-207ENST00000394801 ANKS4BQ8N8V4 417 aa16.06■□□□□ 0.16
UBE2D3-207ENST00000394801 CKAP2Q8WWK9 683 aa16.06■□□□□ 0.16
UBE2D3-207ENST00000394801 RXFP2Q8WXD0 754 aa16.06■□□□□ 0.16
UBE2D3-207ENST00000394801 CPT1BQ92523 772 aa16.06■□□□□ 0.16
UBE2D3-207ENST00000394801 PEBP4Q96S96 227 aa16.06■□□□□ 0.16
UBE2D3-207ENST00000394801 NSRP1Q9H0G5 558 aaKnown RBP16.06■□□□□ 0.16
UBE2D3-207ENST00000394801 SETD4Q9NVD3 440 aa16.06■□□□□ 0.16
UBE2D3-207ENST00000394801 EXOC1LA0A1B0GW35 172 aa16.06■□□□□ 0.16
UBE2D3-207ENST00000394801 VIMP08670 466 aaKnown RBP16.06■□□□□ 0.16
UBE2D3-207ENST00000394801 SETSIPP0DME0 302 aa16.06■□□□□ 0.16
UBE2D3-207ENST00000394801 PDGFRAP16234 1089 aa16.06■□□□□ 0.16
UBE2D3-207ENST00000394801 RPL22P35268 128 aaKnown RBP16.06■□□□□ 0.16
UBE2D3-207ENST00000394801 PSMC4P43686 418 aa16.06■□□□□ 0.16
UBE2D3-207ENST00000394801 CTCFP49711 727 aaPredicted RBP16.06■□□□□ 0.16
UBE2D3-207ENST00000394801 SLC27A1Q6PCB7 646 aa16.06■□□□□ 0.16
UBE2D3-207ENST00000394801 FAM183BPQ6ZVS7 135 aa16.06■□□□□ 0.16
UBE2D3-207ENST00000394801 C12orf29Q8N999 325 aa16.06■□□□□ 0.16
UBE2D3-207ENST00000394801 RSAD2Q8WXG1 361 aa16.06■□□□□ 0.16
UBE2D3-207ENST00000394801 SNX27Q96L92 541 aa16.06■□□□□ 0.16
UBE2D3-207ENST00000394801 ZMAT2Q96NC0 199 aaKnown RBP16.06■□□□□ 0.16
UBE2D3-207ENST00000394801 GCOM2Q9BZD3 368 aaPredicted RBP16.06■□□□□ 0.16
UBE2D3-207ENST00000394801 KCNK9Q9NPC2 374 aa16.06■□□□□ 0.16
UBE2D3-207ENST00000394801 UBN1Q9NPG3 1134 aa16.06■□□□□ 0.16
UBE2D3-207ENST00000394801 TBK1Q9UHD2 729 aa16.06■□□□□ 0.16
UBE2D3-207ENST00000394801 CAPN7Q9Y6W3 813 aa16.06■□□□□ 0.16
UBE2D3-207ENST00000394801 GOLGA6L7A0A1B0GV03 622 aa16.05■□□□□ 0.16
UBE2D3-207ENST00000394801 A6NJR5 290 aa16.05■□□□□ 0.16
UBE2D3-207ENST00000394801 FOXO6A8MYZ6 492 aa16.05■□□□□ 0.16
UBE2D3-207ENST00000394801 NPTXRO95502 500 aa16.05■□□□□ 0.16
UBE2D3-207ENST00000394801 GHRP10912 638 aa16.05■□□□□ 0.16
UBE2D3-207ENST00000394801 LRRC14Q15048 493 aa16.05■□□□□ 0.16
UBE2D3-207ENST00000394801 HIF1AQ16665 826 aa16.05■□□□□ 0.16
UBE2D3-207ENST00000394801 FAM110CQ1W6H9 321 aa16.05■□□□□ 0.16
UBE2D3-207ENST00000394801 PPP1R26Q5T8A7 1209 aaPredicted RBP16.05■□□□□ 0.16
UBE2D3-207ENST00000394801 OR6B2Q6IFH4 312 aa16.05■□□□□ 0.16
UBE2D3-207ENST00000394801 ALKAL1Q6UXT8 129 aa16.05■□□□□ 0.16
UBE2D3-207ENST00000394801 ARHGEF18Q6ZSZ5 1173 aa16.05■□□□□ 0.16
UBE2D3-207ENST00000394801 PLEKHH3Q7Z736 793 aa16.05■□□□□ 0.16
UBE2D3-207ENST00000394801 TMEM110Q86TL2 294 aa16.05■□□□□ 0.16
UBE2D3-207ENST00000394801 RFX6Q8HWS3 928 aa16.05■□□□□ 0.16
UBE2D3-207ENST00000394801 ZBED8Q8IZ13 594 aa16.05■□□□□ 0.16
UBE2D3-207ENST00000394801 LRRC52Q8N7C0 313 aa16.05■□□□□ 0.16
UBE2D3-207ENST00000394801 HSPH1Q92598 858 aa16.05■□□□□ 0.16
UBE2D3-207ENST00000394801 SLC4A5Q9BY07 1137 aa16.05■□□□□ 0.16
UBE2D3-207ENST00000394801 CXCL16Q9H2A7 254 aa16.05■□□□□ 0.16
UBE2D3-207ENST00000394801 SNTG2Q9NY99 539 aa16.05■□□□□ 0.16
UBE2D3-207ENST00000394801 SAMD15Q9P1V8 674 aa16.05■□□□□ 0.16
UBE2D3-207ENST00000394801 FETUBQ9UGM5 382 aa16.05■□□□□ 0.16
UBE2D3-207ENST00000394801 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.05■□□□□ 0.16
UBE2D3-207ENST00000394801 TRIP11Q15643 1979 aa16.05■□□□□ 0.16
UBE2D3-207ENST00000394801 RALGAPA2Q2PPJ7 1873 aa16.05■□□□□ 0.16
UBE2D3-207ENST00000394801 E7ESA3 106 aa16.05■□□□□ 0.16
UBE2D3-207ENST00000394801 DPYSL4O14531 572 aa16.05■□□□□ 0.16
UBE2D3-207ENST00000394801 ADCY6O43306 1168 aa16.05■□□□□ 0.16
UBE2D3-207ENST00000394801 STIP1P31948 543 aaKnown RBP16.05■□□□□ 0.16
UBE2D3-207ENST00000394801 SLC18A1P54219 525 aa16.05■□□□□ 0.16
UBE2D3-207ENST00000394801 PDIA2Q13087 525 aaKnown RBP16.05■□□□□ 0.16
UBE2D3-207ENST00000394801 ANKRD20A8PQ5CZ79 823 aa16.05■□□□□ 0.16
UBE2D3-207ENST00000394801 SH3PXD2AQ5TCZ1 1133 aa16.05■□□□□ 0.16
UBE2D3-207ENST00000394801 DPH6Q7L8W6 267 aa16.05■□□□□ 0.16
UBE2D3-207ENST00000394801 TRABD2AQ86V40 505 aa16.05■□□□□ 0.16
UBE2D3-207ENST00000394801 UNC45BQ8IWX7 931 aa16.05■□□□□ 0.16
UBE2D3-207ENST00000394801 SRRM1Q8IYB3 904 aaKnown RBP16.05■□□□□ 0.16
UBE2D3-207ENST00000394801 CCDC13Q8IYE1 715 aa16.05■□□□□ 0.16
UBE2D3-207ENST00000394801 STK32AQ8WU08 396 aa16.05■□□□□ 0.16
UBE2D3-207ENST00000394801 SLC35F5Q8WV83 523 aa16.05■□□□□ 0.16
UBE2D3-207ENST00000394801 DYDC1Q8WWB3 177 aa16.05■□□□□ 0.16
UBE2D3-207ENST00000394801 USP6NLQ92738 828 aa16.05■□□□□ 0.16
UBE2D3-207ENST00000394801 PIWIL1Q96J94 861 aaKnown RBP16.05■□□□□ 0.16
UBE2D3-207ENST00000394801 MRPL45Q9BRJ2 306 aaKnown RBP16.05■□□□□ 0.16
UBE2D3-207ENST00000394801 SLC24A2Q9UI40 661 aa16.05■□□□□ 0.16
UBE2D3-207ENST00000394801 ZMYND8Q9ULU4 1186 aaPredicted RBP16.05■□□□□ 0.16
UBE2D3-207ENST00000394801 NRCAMQ92823 1304 aa16.05■□□□□ 0.16
UBE2D3-207ENST00000394801 SCN1AP35498 2009 aa16.04■□□□□ 0.16
UBE2D3-207ENST00000394801 CCT8L1PA6NM43 557 aa16.04■□□□□ 0.16
UBE2D3-207ENST00000394801 RASA4BC9J798 803 aa16.04■□□□□ 0.16
UBE2D3-207ENST00000394801 RASA4O43374 803 aa16.04■□□□□ 0.16
UBE2D3-207ENST00000394801 SNX3O60493 162 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms