RNA–Protein interactions for RNA: ENST00000394106.6

CMTM4-202, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM4, Length 1,187 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-202ENST00000394106 EHD2Q9NZN4 543 aa32.67■■■□□ 2.82
CMTM4-202ENST00000394106 CCL26Q9Y258 94 aa32.67■■■□□ 2.82
CMTM4-202ENST00000394106 FAM170BA6NMN3 283 aa32.66■■■□□ 2.82
CMTM4-202ENST00000394106 SOBPA7XYQ1 873 aa32.66■■■□□ 2.82
CMTM4-202ENST00000394106 CBWD6Q4V339 395 aa32.66■■■□□ 2.82
CMTM4-202ENST00000394106 ARHGAP29Q52LW3 1261 aa32.66■■■□□ 2.82
CMTM4-202ENST00000394106 CBWD3Q5JTY5 395 aa32.66■■■□□ 2.82
CMTM4-202ENST00000394106 CBWD5Q5RIA9 395 aa32.66■■■□□ 2.82
CMTM4-202ENST00000394106 TTI2Q6NXR4 508 aa32.66■■■□□ 2.82
CMTM4-202ENST00000394106 PAQR9Q6ZVX9 377 aa32.66■■■□□ 2.82
CMTM4-202ENST00000394106 CRYBG2Q8N1P7 616 aa32.66■■■□□ 2.82
CMTM4-202ENST00000394106 SMARCD1Q96GM5 515 aa32.66■■■□□ 2.82
CMTM4-202ENST00000394106 CEP63Q96MT8 703 aa32.66■■■□□ 2.82
CMTM4-202ENST00000394106 KCNK16Q96T55 309 aa32.66■■■□□ 2.82
CMTM4-202ENST00000394106 DUSP9Q99956 384 aaKnown RBP32.66■■■□□ 2.82
CMTM4-202ENST00000394106 KRT82Q9NSB4 513 aa32.66■■■□□ 2.82
CMTM4-202ENST00000394106 FAM49BQ9NUQ9 324 aa32.66■■■□□ 2.82
CMTM4-202ENST00000394106 TDP1Q9NUW8 608 aa32.66■■■□□ 2.82
CMTM4-202ENST00000394106 PIAS3Q9Y6X2 628 aa32.66■■■□□ 2.82
CMTM4-202ENST00000394106 TRAV19A0A0A6YYK7 116 aa32.65■■■□□ 2.82
CMTM4-202ENST00000394106 BICDL2A1A5D9 508 aa32.65■■■□□ 2.82
CMTM4-202ENST00000394106 ARNTLO00327 626 aa32.65■■■□□ 2.82
CMTM4-202ENST00000394106 TRIM21P19474 475 aaKnown RBP32.65■■■□□ 2.82
CMTM4-202ENST00000394106 STX17P56962 302 aa32.65■■■□□ 2.82
CMTM4-202ENST00000394106 INCA1Q0VD86 236 aa32.65■■■□□ 2.82
CMTM4-202ENST00000394106 CCDC40Q4G0X9 1142 aa32.65■■■□□ 2.82
CMTM4-202ENST00000394106 WDR44Q5JSH3 913 aa32.65■■■□□ 2.82
CMTM4-202ENST00000394106 FUKQ8N0W3 1084 aa32.65■■■□□ 2.82
CMTM4-202ENST00000394106 C12orf29Q8N999 325 aa32.65■■■□□ 2.82
CMTM4-202ENST00000394106 SLC2A14Q8TDB8 520 aa32.65■■■□□ 2.82
CMTM4-202ENST00000394106 TWNKQ96RR1 684 aa32.65■■■□□ 2.82
CMTM4-202ENST00000394106 CYP2S1Q96SQ9 504 aa32.65■■■□□ 2.82
CMTM4-202ENST00000394106 TTLL2Q9BWV7 592 aa32.65■■■□□ 2.82
CMTM4-202ENST00000394106 THG1LQ9NWX6 298 aaKnown RBP32.65■■■□□ 2.82
CMTM4-202ENST00000394106 ANAPC1Q9H1A4 1944 aa32.65■■■□□ 2.82
CMTM4-202ENST00000394106 C2orf78A6NCI8 922 aa32.64■■■□□ 2.82
CMTM4-202ENST00000394106 AP1G2O75843 785 aa32.64■■■□□ 2.82
CMTM4-202ENST00000394106 CKMP06732 381 aa32.64■■■□□ 2.82
CMTM4-202ENST00000394106 FILIP1Q7Z7B0 1213 aa32.64■■■□□ 2.82
CMTM4-202ENST00000394106 TTC16Q8NEE8 873 aa32.64■■■□□ 2.82
CMTM4-202ENST00000394106 TTC8Q8TAM2 541 aa32.64■■■□□ 2.82
CMTM4-202ENST00000394106 ATOH1Q92858 354 aaPredicted RBP32.64■■■□□ 2.82
CMTM4-202ENST00000394106 SLC22A12Q96S37 553 aa32.64■■■□□ 2.82
CMTM4-202ENST00000394106 NT5C1AQ9BXI3 368 aa32.64■■■□□ 2.82
CMTM4-202ENST00000394106 IRF2BPLQ9H1B7 796 aa32.64■■■□□ 2.82
CMTM4-202ENST00000394106 METTL14Q9HCE5 456 aaKnown RBP32.64■■■□□ 2.82
CMTM4-202ENST00000394106 DMAP1Q9NPF5 467 aaPredicted RBP32.64■■■□□ 2.82
CMTM4-202ENST00000394106 FAM86C1Q9NVL1 165 aa32.64■■■□□ 2.82
CMTM4-202ENST00000394106 TRPM5Q9NZQ8 1165 aa32.64■■■□□ 2.82
CMTM4-202ENST00000394106 DLGAP2Q9P1A6 1054 aa32.64■■■□□ 2.82
CMTM4-202ENST00000394106 KIAA1468Q9P260 1216 aa32.64■■■□□ 2.82
CMTM4-202ENST00000394106 MRPS17Q9Y2R5 130 aaKnown RBP32.64■■■□□ 2.82
CMTM4-202ENST00000394106 USP17L7P0C7H9 530 aa32.63■■■□□ 2.81
CMTM4-202ENST00000394106 GLULP15104 373 aa32.63■■■□□ 2.81
CMTM4-202ENST00000394106 TARSP26639 723 aaKnown RBP32.63■■■□□ 2.81
CMTM4-202ENST00000394106 KPNA1P52294 538 aaPredicted RBP32.63■■■□□ 2.81
CMTM4-202ENST00000394106 PAK1Q13153 545 aa32.63■■■□□ 2.81
CMTM4-202ENST00000394106 ARL14EPQ8N8R7 260 aaPredicted RBP32.63■■■□□ 2.81
CMTM4-202ENST00000394106 SLC35C1Q96A29 364 aa32.63■■■□□ 2.81
CMTM4-202ENST00000394106 KIF9Q9HAQ2 790 aa32.63■■■□□ 2.81
CMTM4-202ENST00000394106 NDRG2Q9UN36 371 aaKnown RBP32.63■■■□□ 2.81
CMTM4-202ENST00000394106 SHISA7A6NL88 538 aa32.62■■■□□ 2.81
CMTM4-202ENST00000394106 MAN2B1O00754 1011 aa32.62■■■□□ 2.81
CMTM4-202ENST00000394106 ADORA2BP29275 332 aa32.62■■■□□ 2.81
CMTM4-202ENST00000394106 FRMD5Q7Z6J6 570 aa32.62■■■□□ 2.81
CMTM4-202ENST00000394106 NUP93Q8N1F7 819 aa32.62■■■□□ 2.81
CMTM4-202ENST00000394106 TRIML1Q8N9V2 468 aa32.62■■■□□ 2.81
CMTM4-202ENST00000394106 NELL2Q99435 816 aa32.62■■■□□ 2.81
CMTM4-202ENST00000394106 OSBPL6Q9BZF3 934 aa32.62■■■□□ 2.81
CMTM4-202ENST00000394106 CILPO75339 1184 aa32.61■■■□□ 2.81
CMTM4-202ENST00000394106 ABL1P00519 1130 aa32.61■■■□□ 2.81
CMTM4-202ENST00000394106 PLCB2Q00722 1185 aa32.61■■■□□ 2.81
CMTM4-202ENST00000394106 TAF10Q12962 218 aa32.61■■■□□ 2.81
CMTM4-202ENST00000394106 ZNF268Q14587 947 aaPredicted RBP32.61■■■□□ 2.81
CMTM4-202ENST00000394106 ANGPT1Q15389 498 aa32.61■■■□□ 2.81
CMTM4-202ENST00000394106 FAM3CQ92520 227 aa32.61■■■□□ 2.81
CMTM4-202ENST00000394106 TATDN2Q93075 761 aa32.61■■■□□ 2.81
CMTM4-202ENST00000394106 GTSE1Q9NYZ3 720 aa32.61■■■□□ 2.81
CMTM4-202ENST00000394106 GCNT4Q9P109 453 aa32.61■■■□□ 2.81
CMTM4-202ENST00000394106 MYH10P35580 1976 aa32.6■■■□□ 2.81
CMTM4-202ENST00000394106 RTN3O95197 1032 aaPredicted RBP32.6■■■□□ 2.81
CMTM4-202ENST00000394106 HDCP19113 662 aa32.6■■■□□ 2.81
CMTM4-202ENST00000394106 SOX9P48436 509 aa32.6■■■□□ 2.81
CMTM4-202ENST00000394106 TNK2Q07912 1038 aa32.6■■■□□ 2.81
CMTM4-202ENST00000394106 ZNF394Q53GI3 561 aa32.6■■■□□ 2.81
CMTM4-202ENST00000394106 WHAMMQ8TF30 809 aa32.6■■■□□ 2.81
CMTM4-202ENST00000394106 SLITRK1Q96PX8 696 aa32.6■■■□□ 2.81
CMTM4-202ENST00000394106 PHOX2BQ99453 314 aa32.6■■■□□ 2.81
CMTM4-202ENST00000394106 SMOQ99835 787 aa32.6■■■□□ 2.81
CMTM4-202ENST00000394106 ARID3AQ99856 593 aa32.6■■■□□ 2.81
CMTM4-202ENST00000394106 DNAI2Q9GZS0 605 aa32.6■■■□□ 2.81
CMTM4-202ENST00000394106 GKN1Q9NS71 199 aa32.6■■■□□ 2.81
CMTM4-202ENST00000394106 ZNF840PA6NDX5 716 aa32.59■■■□□ 2.81
CMTM4-202ENST00000394106 YWHAQP27348 245 aa32.59■■■□□ 2.81
CMTM4-202ENST00000394106 PPP3CCP48454 512 aa32.59■■■□□ 2.81
CMTM4-202ENST00000394106 CC2D1AQ6P1N0 951 aaPredicted RBP32.59■■■□□ 2.81
CMTM4-202ENST00000394106 FOXR2Q6PJQ5 311 aa32.59■■■□□ 2.81
CMTM4-202ENST00000394106 SCAMP5Q8TAC9 235 aa32.59■■■□□ 2.81
CMTM4-202ENST00000394106 RIN3Q8TB24 985 aa32.59■■■□□ 2.81
CMTM4-202ENST00000394106 FBXO32Q969P5 355 aa32.59■■■□□ 2.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms