RNA–Protein interactions for RNA: ENST00000392542.6

RFC5-201, Transcript of replication factor C subunit 5, humanhuman

TSL 2 BASIC

Gene RFC5, Length 2,449 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5-201ENST00000392542 CCDC15Q0P6D6 951 aa12.89□□□□□ -0.35
RFC5-201ENST00000392542 TAF5Q15542 800 aa12.89□□□□□ -0.35
RFC5-201ENST00000392542 MSS51Q4VC12 460 aa12.89□□□□□ -0.35
RFC5-201ENST00000392542 IFNLR1Q8IU57 520 aaPredicted RBP12.89□□□□□ -0.35
RFC5-201ENST00000392542 SULF1Q8IWU6 871 aa12.89□□□□□ -0.35
RFC5-201ENST00000392542 HSPH1Q92598 858 aa12.89□□□□□ -0.35
RFC5-201ENST00000392542 DCPSQ96C86 337 aaKnown RBP12.89□□□□□ -0.35
RFC5-201ENST00000392542 MRRFQ96E11 262 aaKnown RBP12.89□□□□□ -0.35
RFC5-201ENST00000392542 CLMNQ96JQ2 1002 aa12.89□□□□□ -0.35
RFC5-201ENST00000392542 RNPEPQ9H4A4 650 aa12.89□□□□□ -0.35
RFC5-201ENST00000392542 PDZD7Q9H5P4 517 aa12.89□□□□□ -0.35
RFC5-201ENST00000392542 SSU72Q9NP77 194 aaKnown RBP12.89□□□□□ -0.35
RFC5-201ENST00000392542 PDGFCQ9NRA1 345 aa12.89□□□□□ -0.35
RFC5-201ENST00000392542 A0A087WZ62 844 aa12.89□□□□□ -0.35
RFC5-201ENST00000392542 SPDYE5A6NIY4 337 aa12.89□□□□□ -0.35
RFC5-201ENST00000392542 TMEM63AO94886 807 aa12.89□□□□□ -0.35
RFC5-201ENST00000392542 CA4P22748 312 aa12.89□□□□□ -0.35
RFC5-201ENST00000392542 SSTR1P30872 391 aa12.89□□□□□ -0.35
RFC5-201ENST00000392542 RPA3P35244 121 aaPredicted RBP12.89□□□□□ -0.35
RFC5-201ENST00000392542 PDK4Q16654 411 aa12.89□□□□□ -0.35
RFC5-201ENST00000392542 KLHL38Q2WGJ6 581 aa12.89□□□□□ -0.35
RFC5-201ENST00000392542 FAM102AQ5T9C2 384 aaPredicted RBP12.89□□□□□ -0.35
RFC5-201ENST00000392542 ECHDC2Q86YB7 292 aa12.89□□□□□ -0.35
RFC5-201ENST00000392542 FBXO36Q8NEA4 188 aa12.89□□□□□ -0.35
RFC5-201ENST00000392542 NLGN2Q8NFZ4 835 aa12.89□□□□□ -0.35
RFC5-201ENST00000392542 FDXACB1Q9BRP7 624 aaPredicted RBP12.89□□□□□ -0.35
RFC5-201ENST00000392542 WDR83Q9BRX9 315 aaKnown RBP12.89□□□□□ -0.35
RFC5-201ENST00000392542 DHRS4Q9BTZ2 278 aa12.89□□□□□ -0.35
RFC5-201ENST00000392542 MAK16Q9BXY0 300 aaKnown RBP12.89□□□□□ -0.35
RFC5-201ENST00000392542 ACSS3Q9H6R3 686 aa12.89□□□□□ -0.35
RFC5-201ENST00000392542 RSAD1Q9HA92 442 aa12.89□□□□□ -0.35
RFC5-201ENST00000392542 ADARB2Q9NS39 739 aaKnown RBP12.89□□□□□ -0.35
RFC5-201ENST00000392542 PNMA3Q9UL41 463 aa12.89□□□□□ -0.35
RFC5-201ENST00000392542 GRID1Q9ULK0 1009 aa12.89□□□□□ -0.35
RFC5-201ENST00000392542 LOC102724159A0A0B4J2E5 919 aa12.88□□□□□ -0.35
RFC5-201ENST00000392542 A0A1W2PPM1 405 aa12.88□□□□□ -0.35
RFC5-201ENST00000392542 TCRBV7S3A2A0A539 114 aa12.88□□□□□ -0.35
RFC5-201ENST00000392542 ENDOD1O94919 500 aa12.88□□□□□ -0.35
RFC5-201ENST00000392542 RBP3P10745 1247 aa12.88□□□□□ -0.35
RFC5-201ENST00000392542 INSRRP14616 1297 aa12.88□□□□□ -0.35
RFC5-201ENST00000392542 TSHRP16473 764 aa12.88□□□□□ -0.35
RFC5-201ENST00000392542 GPD1P21695 349 aa12.88□□□□□ -0.35
RFC5-201ENST00000392542 ZNF143P52747 638 aaPredicted RBP12.88□□□□□ -0.35
RFC5-201ENST00000392542 KCNJ2P63252 427 aa12.88□□□□□ -0.35
RFC5-201ENST00000392542 DNAJC3Q13217 504 aa12.88□□□□□ -0.35
RFC5-201ENST00000392542 RIPK1Q13546 671 aa12.88□□□□□ -0.35
RFC5-201ENST00000392542 PWP2Q15269 919 aaKnown RBP12.88□□□□□ -0.35
RFC5-201ENST00000392542 SLC1A5Q15758 541 aa12.88□□□□□ -0.35
RFC5-201ENST00000392542 SLC10A6Q3KNW5 377 aa12.88□□□□□ -0.35
RFC5-201ENST00000392542 PREPLQ4J6C6 727 aaPredicted RBP12.88□□□□□ -0.35
RFC5-201ENST00000392542 ADGRD1Q6QNK2 874 aa12.88□□□□□ -0.35
RFC5-201ENST00000392542 LINC01465Q8N7H1 131 aa12.88□□□□□ -0.35
RFC5-201ENST00000392542 FAM71DQ8N9W8 422 aa12.88□□□□□ -0.35
RFC5-201ENST00000392542 HPDLQ96IR7 371 aa12.88□□□□□ -0.35
RFC5-201ENST00000392542 CPB2Q96IY4 423 aa12.88□□□□□ -0.35
RFC5-201ENST00000392542 HEXIM2Q96MH2 286 aaKnown RBP12.88□□□□□ -0.35
RFC5-201ENST00000392542 PEBP4Q96S96 227 aa12.88□□□□□ -0.35
RFC5-201ENST00000392542 CALN1Q9BXU9 219 aa12.88□□□□□ -0.35
RFC5-201ENST00000392542 NOD2Q9HC29 1040 aa12.88□□□□□ -0.35
RFC5-201ENST00000392542 XPO7Q9UIA9 1087 aaKnown RBP12.88□□□□□ -0.35
RFC5-201ENST00000392542 PHTF1Q9UMS5 762 aa12.88□□□□□ -0.35
RFC5-201ENST00000392542 KCNH4Q9UQ05 1017 aa12.88□□□□□ -0.35
RFC5-201ENST00000392542 CSDE1O75534 798 aaKnown RBP12.88□□□□□ -0.35
RFC5-201ENST00000392542 SLC8A1P32418 973 aa12.88□□□□□ -0.35
RFC5-201ENST00000392542 INCA1Q0VD86 236 aa12.88□□□□□ -0.35
RFC5-201ENST00000392542 TMEM132DQ14C87 1099 aa12.88□□□□□ -0.35
RFC5-201ENST00000392542 EFTUD2Q15029 972 aaKnown RBP eCLIP12.88□□□□□ -0.353e-12■■■■■ 37.4
RFC5-201ENST00000392542 KYAT1Q16773 422 aa12.88□□□□□ -0.35
RFC5-201ENST00000392542 ZC3H12AQ5D1E8 599 aaKnown RBP12.88□□□□□ -0.35
RFC5-201ENST00000392542 WDR78Q5VTH9 848 aa12.88□□□□□ -0.35
RFC5-201ENST00000392542 HHATQ5VTY9 493 aa12.88□□□□□ -0.35
RFC5-201ENST00000392542 PNMA8AQ86V59 439 aaPredicted RBP12.88□□□□□ -0.35
RFC5-201ENST00000392542 ANKRD13AQ8IZ07 590 aa12.88□□□□□ -0.35
RFC5-201ENST00000392542 ANKLE1Q8NAG6 615 aa12.88□□□□□ -0.35
RFC5-201ENST00000392542 UBA3Q8TBC4 463 aa12.88□□□□□ -0.35
RFC5-201ENST00000392542 LRRC8CQ8TDW0 803 aa12.88□□□□□ -0.35
RFC5-201ENST00000392542 FBF1Q8TES7 1133 aa12.88□□□□□ -0.35
RFC5-201ENST00000392542 KLHL29Q96CT2 875 aa12.88□□□□□ -0.35
RFC5-201ENST00000392542 PAFAH2Q99487 392 aa12.88□□□□□ -0.35
RFC5-201ENST00000392542 CNPY3Q9BT09 278 aa12.88□□□□□ -0.35
RFC5-201ENST00000392542 MROH8Q9H579 483 aa12.88□□□□□ -0.35
RFC5-201ENST00000392542 BARX2Q9UMQ3 279 aaPredicted RBP12.88□□□□□ -0.35
RFC5-201ENST00000392542 IGF2BP3O00425 579 aaKnown RBP eCLIP12.87□□□□□ -0.35
RFC5-201ENST00000392542 EDF1O60869 148 aaKnown RBP12.87□□□□□ -0.35
RFC5-201ENST00000392542 OSBPP22059 807 aa12.87□□□□□ -0.35
RFC5-201ENST00000392542 SKIV2L2P42285 1042 aaKnown RBP12.87□□□□□ -0.35
RFC5-201ENST00000392542 ROR1Q01973 937 aa12.87□□□□□ -0.35
RFC5-201ENST00000392542 RNASELQ05823 741 aaKnown RBP12.87□□□□□ -0.35
RFC5-201ENST00000392542 ARHGAP1Q07960 439 aa12.87□□□□□ -0.35
RFC5-201ENST00000392542 MOGSQ13724 837 aa12.87□□□□□ -0.35
RFC5-201ENST00000392542 DPYSL3Q14195 570 aa12.87□□□□□ -0.35
RFC5-201ENST00000392542 NOMO1Q15155 1222 aa12.87□□□□□ -0.35
RFC5-201ENST00000392542 BBS9Q3SYG4 887 aa12.87□□□□□ -0.35
RFC5-201ENST00000392542 WLSQ5T9L3 541 aa12.87□□□□□ -0.35
RFC5-201ENST00000392542 MAP1SQ66K74 1059 aaPredicted RBP12.87□□□□□ -0.35
RFC5-201ENST00000392542 C3orf62Q6ZUJ4 267 aa12.87□□□□□ -0.35
RFC5-201ENST00000392542 ILDR2Q71H61 639 aa12.87□□□□□ -0.35
RFC5-201ENST00000392542 PALM2Q8IXS6 379 aa12.87□□□□□ -0.35
RFC5-201ENST00000392542 PDIK1LQ8N165 341 aa12.87□□□□□ -0.35
RFC5-201ENST00000392542 TAB3Q8N5C8 712 aaPredicted RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms