RNA–Protein interactions for RNA: ENST00000389138.7

ERCC4-202, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 2,106 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-202ENST00000389138 NNMTP40261 264 aa6.12□□□□□ -1.43
ERCC4-202ENST00000389138 RGS2P41220 211 aa6.12□□□□□ -1.43
ERCC4-202ENST00000389138 RAD23AP54725 363 aa6.12□□□□□ -1.43
ERCC4-202ENST00000389138 VAMP2P63027 116 aa6.12□□□□□ -1.43
ERCC4-202ENST00000389138 NSUN2Q08J23 767 aaKnown RBP eCLIP6.12□□□□□ -1.43
ERCC4-202ENST00000389138 STK4Q13043 487 aa6.12□□□□□ -1.43
ERCC4-202ENST00000389138 ADAM9Q13443 819 aa6.12□□□□□ -1.43
ERCC4-202ENST00000389138 LAPTM5Q13571 262 aa6.12□□□□□ -1.43
ERCC4-202ENST00000389138 TBCEQ15813 527 aaPredicted RBP6.12□□□□□ -1.43
ERCC4-202ENST00000389138 AMOTQ4VCS5 1084 aa6.12□□□□□ -1.43
ERCC4-202ENST00000389138 KRBOX4Q5JUW0 171 aa6.12□□□□□ -1.43
ERCC4-202ENST00000389138 LRCH2Q5VUJ6 765 aa6.12□□□□□ -1.43
ERCC4-202ENST00000389138 G2E3Q7L622 706 aa6.12□□□□□ -1.43
ERCC4-202ENST00000389138 TTC7BQ86TV6 843 aa6.12□□□□□ -1.43
ERCC4-202ENST00000389138 CRACR2BQ8N4Y2 399 aaPredicted RBP6.12□□□□□ -1.43
ERCC4-202ENST00000389138 TTC39CQ8N584 583 aa6.12□□□□□ -1.43
ERCC4-202ENST00000389138 CISD2Q8N5K1 135 aaKnown RBP6.12□□□□□ -1.43
ERCC4-202ENST00000389138 KREMEN2Q8NCW0 462 aa6.12□□□□□ -1.43
ERCC4-202ENST00000389138 ZNF417Q8TAU3 575 aa6.12□□□□□ -1.43
ERCC4-202ENST00000389138 FAM71BQ8TC56 605 aa6.12□□□□□ -1.43
ERCC4-202ENST00000389138 KIAA1524Q8TCG1 905 aa6.12□□□□□ -1.43
ERCC4-202ENST00000389138 DCAF4Q8WV16 495 aa6.12□□□□□ -1.43
ERCC4-202ENST00000389138 AFG1LQ8WV93 481 aa6.12□□□□□ -1.43
ERCC4-202ENST00000389138 NACC2Q96BF6 587 aa6.12□□□□□ -1.43
ERCC4-202ENST00000389138 CFAP36Q96G28 342 aa6.12□□□□□ -1.43
ERCC4-202ENST00000389138 RCC1LQ96I51 464 aaKnown RBP6.12□□□□□ -1.43
ERCC4-202ENST00000389138 ZC3H10Q96K80 434 aaKnown RBP6.12□□□□□ -1.43
ERCC4-202ENST00000389138 ZNF587Q96SQ5 575 aaPredicted RBP6.12□□□□□ -1.43
ERCC4-202ENST00000389138 ATP6V0BQ99437 205 aa6.12□□□□□ -1.43
ERCC4-202ENST00000389138 LPIN3Q9BQK8 851 aa6.12□□□□□ -1.43
ERCC4-202ENST00000389138 TNMDQ9H2S6 317 aa6.12□□□□□ -1.43
ERCC4-202ENST00000389138 NKX2-4Q9H2Z4 354 aa6.12□□□□□ -1.43
ERCC4-202ENST00000389138 BRF2Q9HAW0 419 aa6.12□□□□□ -1.43
ERCC4-202ENST00000389138 PICK1Q9NRD5 415 aa6.12□□□□□ -1.43
ERCC4-202ENST00000389138 WHRNQ9P202 907 aa6.12□□□□□ -1.43
ERCC4-202ENST00000389138 USP36Q9P275 1121 aaKnown RBP6.12□□□□□ -1.43
ERCC4-202ENST00000389138 MYO1AQ9UBC5 1043 aa6.12□□□□□ -1.43
ERCC4-202ENST00000389138 MAN2B2Q9Y2E5 1009 aa6.12□□□□□ -1.43
ERCC4-202ENST00000389138 DTNAQ9Y4J8 743 aa6.12□□□□□ -1.43
ERCC4-202ENST00000389138 SCN7AQ01118 1682 aa6.12□□□□□ -1.43
ERCC4-202ENST00000389138 LRRC72A6NJI9 287 aa6.11□□□□□ -1.43
ERCC4-202ENST00000389138 SPDYE3A6NKU9 549 aa6.11□□□□□ -1.43
ERCC4-202ENST00000389138 MYO1FO00160 1098 aa6.11□□□□□ -1.43
ERCC4-202ENST00000389138 GNB5O14775 395 aa6.11□□□□□ -1.43
ERCC4-202ENST00000389138 CA12O43570 354 aa6.11□□□□□ -1.43
ERCC4-202ENST00000389138 SYNCRIPO60506 623 aaKnown RBP6.11□□□□□ -1.43
ERCC4-202ENST00000389138 ALBP02768 609 aa6.11□□□□□ -1.43
ERCC4-202ENST00000389138 SCG5P05408 212 aa6.11□□□□□ -1.43
ERCC4-202ENST00000389138 HEXBP07686 556 aa6.11□□□□□ -1.43
ERCC4-202ENST00000389138 HOXB4P17483 251 aaPredicted RBP6.11□□□□□ -1.43
ERCC4-202ENST00000389138 HLA-DPA1P20036 260 aa6.11□□□□□ -1.43
ERCC4-202ENST00000389138 PTX3P26022 381 aaPredicted RBP6.11□□□□□ -1.43
ERCC4-202ENST00000389138 TM4SF1P30408 202 aa6.11□□□□□ -1.43
ERCC4-202ENST00000389138 ECI1P42126 302 aa6.11□□□□□ -1.43
ERCC4-202ENST00000389138 MAP2K6P52564 334 aa6.11□□□□□ -1.43
ERCC4-202ENST00000389138 HTD2P86397 168 aa6.11□□□□□ -1.43
ERCC4-202ENST00000389138 SLC20A2Q08357 652 aa6.11□□□□□ -1.43
ERCC4-202ENST00000389138 SLC12A1Q13621 1099 aa6.11□□□□□ -1.43
ERCC4-202ENST00000389138 ALG11Q2TAA5 492 aa6.11□□□□□ -1.43
ERCC4-202ENST00000389138 ARHGAP15Q53QZ3 475 aa6.11□□□□□ -1.43
ERCC4-202ENST00000389138 FSTL4Q6MZW2 842 aa6.11□□□□□ -1.43
ERCC4-202ENST00000389138 RGS9BPQ6ZS82 235 aa6.11□□□□□ -1.43
ERCC4-202ENST00000389138 HFE2Q6ZVN8 426 aa6.11□□□□□ -1.43
ERCC4-202ENST00000389138 TMEM110Q86TL2 294 aa6.11□□□□□ -1.43
ERCC4-202ENST00000389138 ZNF610Q8N9Z0 462 aa6.11□□□□□ -1.43
ERCC4-202ENST00000389138 TBC1D22AQ8WUA7 517 aa6.11□□□□□ -1.43
ERCC4-202ENST00000389138 HSPH1Q92598 858 aa6.11□□□□□ -1.43
ERCC4-202ENST00000389138 VPS33AQ96AX1 596 aa6.11□□□□□ -1.43
ERCC4-202ENST00000389138 FAM120BQ96EK7 910 aaKnown RBP6.11□□□□□ -1.43
ERCC4-202ENST00000389138 RNF125Q96EQ8 232 aa6.11□□□□□ -1.43
ERCC4-202ENST00000389138 UPF2Q9HAU5 1272 aaKnown RBP6.11□□□□□ -1.43
ERCC4-202ENST00000389138 ZNF287Q9HBT7 754 aa6.11□□□□□ -1.43
ERCC4-202ENST00000389138 NAGPAQ9UK23 515 aa6.11□□□□□ -1.43
ERCC4-202ENST00000389138 PTBP2Q9UKA9 531 aaKnown RBP6.11□□□□□ -1.43
ERCC4-202ENST00000389138 TMEM5Q9Y2B1 443 aa6.11□□□□□ -1.43
ERCC4-202ENST00000389138 USP15Q9Y4E8 981 aaPredicted RBP6.11□□□□□ -1.43
ERCC4-202ENST00000389138 SPO11Q9Y5K1 396 aa6.11□□□□□ -1.43
ERCC4-202ENST00000389138 CARMIL3Q8ND23 1372 aa6.11□□□□□ -1.43
ERCC4-202ENST00000389138 HMX3A6NHT5 357 aa6.11□□□□□ -1.43
ERCC4-202ENST00000389138 CCDC154A6NI56 674 aa6.11□□□□□ -1.43
ERCC4-202ENST00000389138 NUDT19A8MXV4 375 aa6.11□□□□□ -1.43
ERCC4-202ENST00000389138 J3QW42 95 aa6.11□□□□□ -1.43
ERCC4-202ENST00000389138 CTAGE5O15320 804 aa6.11□□□□□ -1.43
ERCC4-202ENST00000389138 ASAP2O43150 1006 aa6.11□□□□□ -1.43
ERCC4-202ENST00000389138 CCP110O43303 1012 aa6.11□□□□□ -1.43
ERCC4-202ENST00000389138 HTRA2O43464 458 aaPredicted RBP6.11□□□□□ -1.43
ERCC4-202ENST00000389138 ADAM20O43506 726 aa6.11□□□□□ -1.43
ERCC4-202ENST00000389138 E2F6O75461 281 aa6.11□□□□□ -1.43
ERCC4-202ENST00000389138 SMNDC1O75940 238 aaKnown RBP eCLIP6.11□□□□□ -1.43
ERCC4-202ENST00000389138 PTPRAP18433 802 aa6.11□□□□□ -1.43
ERCC4-202ENST00000389138 MATR3P43243 847 aaKnown RBP eCLIP6.11□□□□□ -1.43
ERCC4-202ENST00000389138 ASMTP46597 345 aa6.11□□□□□ -1.43
ERCC4-202ENST00000389138 HNMTP50135 292 aa6.11□□□□□ -1.43
ERCC4-202ENST00000389138 STARD6P59095 220 aa6.11□□□□□ -1.43
ERCC4-202ENST00000389138 ZNF445P59923 1031 aa6.11□□□□□ -1.43
ERCC4-202ENST00000389138 AP2B1P63010 937 aa6.11□□□□□ -1.43
ERCC4-202ENST00000389138 ZBTB16Q05516 673 aa6.11□□□□□ -1.43
ERCC4-202ENST00000389138 CNGA2Q16280 664 aa6.11□□□□□ -1.43
ERCC4-202ENST00000389138 FSCN1Q16658 493 aaKnown RBP6.11□□□□□ -1.43
ERCC4-202ENST00000389138 CYP4F22Q6NT55 531 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms