RNA–Protein interactions for RNA: ENST00000384254.1

RNU6-40P-201, Transcript of RNA, U6 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU6-40P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-40P-201ENST00000384254 CCNIQ14094 377 aa6.32□□□□□ -1.4
RNU6-40P-201ENST00000384254 CYP2A13Q16696 494 aa6.32□□□□□ -1.4
RNU6-40P-201ENST00000384254 ZIK1Q3SY52 487 aaPredicted RBP6.32□□□□□ -1.4
RNU6-40P-201ENST00000384254 ALFQ53S48 1182 aa6.32□□□□□ -1.4
RNU6-40P-201ENST00000384254 B3GNTL1Q67FW5 361 aaPredicted RBP6.32□□□□□ -1.4
RNU6-40P-201ENST00000384254 KLHL17Q6TDP4 642 aa6.32□□□□□ -1.4
RNU6-40P-201ENST00000384254 LRRC55Q6ZSA7 311 aa6.32□□□□□ -1.4
RNU6-40P-201ENST00000384254 KIAA0408Q6ZU52 694 aa6.32□□□□□ -1.4
RNU6-40P-201ENST00000384254 GALNT15Q8N3T1 639 aa6.32□□□□□ -1.4
RNU6-40P-201ENST00000384254 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.32□□□□□ -1.4
RNU6-40P-201ENST00000384254 STYXQ8WUJ0 223 aa6.32□□□□□ -1.4
RNU6-40P-201ENST00000384254 ATRIPQ8WXE1 791 aa6.32□□□□□ -1.4
RNU6-40P-201ENST00000384254 TBC1D20Q96BZ9 403 aa6.32□□□□□ -1.4
RNU6-40P-201ENST00000384254 FAM136AQ96C01 138 aa6.32□□□□□ -1.4
RNU6-40P-201ENST00000384254 CDK5RAP1Q96SZ6 601 aaKnown RBP6.32□□□□□ -1.4
RNU6-40P-201ENST00000384254 TPSD1Q9BZJ3 242 aa6.32□□□□□ -1.4
RNU6-40P-201ENST00000384254 GBA2Q9HCG7 927 aaPredicted RBP6.32□□□□□ -1.4
RNU6-40P-201ENST00000384254 CD248Q9HCU0 757 aa6.32□□□□□ -1.4
RNU6-40P-201ENST00000384254 HELLSQ9NRZ9 838 aa6.32□□□□□ -1.4
RNU6-40P-201ENST00000384254 IGSF9Q9P2J2 1179 aa6.32□□□□□ -1.4
RNU6-40P-201ENST00000384254 SERTAD3Q9UJW9 196 aa6.32□□□□□ -1.4
RNU6-40P-201ENST00000384254 MAP3K2Q9Y2U5 619 aa6.32□□□□□ -1.4
RNU6-40P-201ENST00000384254 GRXCR1A8MXD5 290 aa6.31□□□□□ -1.4
RNU6-40P-201ENST00000384254 CD3EAPO15446 510 aaKnown RBP6.31□□□□□ -1.4
RNU6-40P-201ENST00000384254 ASNA1O43681 348 aa6.31□□□□□ -1.4
RNU6-40P-201ENST00000384254 NDUFA10O95299 355 aa6.31□□□□□ -1.4
RNU6-40P-201ENST00000384254 VIPP01282 170 aa6.31□□□□□ -1.4
RNU6-40P-201ENST00000384254 ITGA5P08648 1049 aa6.31□□□□□ -1.4
RNU6-40P-201ENST00000384254 DHRS4L1P0CG22 281 aa6.31□□□□□ -1.4
RNU6-40P-201ENST00000384254 PECAM1P16284 738 aaPredicted RBP6.31□□□□□ -1.4
RNU6-40P-201ENST00000384254 NPPBP16860 134 aa6.31□□□□□ -1.4
RNU6-40P-201ENST00000384254 SLC5A2P31639 672 aa6.31□□□□□ -1.4
RNU6-40P-201ENST00000384254 PGDP52209 483 aa6.31□□□□□ -1.4
RNU6-40P-201ENST00000384254 VAV2P52735 878 aa6.31□□□□□ -1.4
RNU6-40P-201ENST00000384254 TOB2Q14106 344 aaPredicted RBP6.31□□□□□ -1.4
RNU6-40P-201ENST00000384254 RAP1GAP2Q684P5 730 aa6.31□□□□□ -1.4
RNU6-40P-201ENST00000384254 SP5Q6BEB4 398 aaPredicted RBP6.31□□□□□ -1.4
RNU6-40P-201ENST00000384254 TMPRSS9Q7Z410 1059 aa6.31□□□□□ -1.4
RNU6-40P-201ENST00000384254 RASGRP3Q8IV61 690 aa6.31□□□□□ -1.4
RNU6-40P-201ENST00000384254 CCDC117Q8IWD4 279 aaPredicted RBP6.31□□□□□ -1.4
RNU6-40P-201ENST00000384254 TTC9BQ8N6N2 239 aa6.31□□□□□ -1.4
RNU6-40P-201ENST00000384254 Q8NA96 180 aa6.31□□□□□ -1.4
RNU6-40P-201ENST00000384254 B3GALNT2Q8NCR0 500 aa6.31□□□□□ -1.4
RNU6-40P-201ENST00000384254 ABHD5Q8WTS1 349 aa6.31□□□□□ -1.4
RNU6-40P-201ENST00000384254 FAM227BQ96M60 508 aa6.31□□□□□ -1.4
RNU6-40P-201ENST00000384254 FAM167BQ9BTA0 163 aa6.31□□□□□ -1.4
RNU6-40P-201ENST00000384254 KATNAL1Q9BW62 490 aa6.31□□□□□ -1.4
RNU6-40P-201ENST00000384254 SORBS1Q9BX66 1292 aaKnown RBP6.31□□□□□ -1.4
RNU6-40P-201ENST00000384254 TRIM5Q9C035 493 aa6.31□□□□□ -1.4
RNU6-40P-201ENST00000384254 KLC2Q9H0B6 622 aa6.31□□□□□ -1.4
RNU6-40P-201ENST00000384254 HERC5Q9UII4 1024 aaKnown RBP6.31□□□□□ -1.4
RNU6-40P-201ENST00000384254 CNOT11Q9UKZ1 510 aaKnown RBP6.31□□□□□ -1.4
RNU6-40P-201ENST00000384254 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.31□□□□□ -1.4
RNU6-40P-201ENST00000384254 USP1O94782 785 aa6.3□□□□□ -1.4
RNU6-40P-201ENST00000384254 TNFRSF6BO95407 300 aa6.3□□□□□ -1.4
RNU6-40P-201ENST00000384254 LAG3P18627 525 aa6.3□□□□□ -1.4
RNU6-40P-201ENST00000384254 MST1P26927 711 aa6.3□□□□□ -1.4
RNU6-40P-201ENST00000384254 EPHA3P29320 983 aa6.3□□□□□ -1.4
RNU6-40P-201ENST00000384254 MAPK9P45984 424 aa6.3□□□□□ -1.4
RNU6-40P-201ENST00000384254 ARL4CP56559 192 aa6.3□□□□□ -1.4
RNU6-40P-201ENST00000384254 POSTNQ15063 836 aa6.3□□□□□ -1.4
RNU6-40P-201ENST00000384254 TAF12Q16514 161 aa6.3□□□□□ -1.4
RNU6-40P-201ENST00000384254 TIGD6Q17RP2 521 aa6.3□□□□□ -1.4
RNU6-40P-201ENST00000384254 PTCHD3Q3KNS1 767 aa6.3□□□□□ -1.4
RNU6-40P-201ENST00000384254 TMTC4Q5T4D3 741 aa6.3□□□□□ -1.4
RNU6-40P-201ENST00000384254 DEPDC1Q5TB30 811 aa6.3□□□□□ -1.4
RNU6-40P-201ENST00000384254 ANKRD45Q5TZF3 282 aa6.3□□□□□ -1.4
RNU6-40P-201ENST00000384254 VPS53Q5VIR6 699 aa6.3□□□□□ -1.4
RNU6-40P-201ENST00000384254 MANEALQ5VSG8 457 aa6.3□□□□□ -1.4
RNU6-40P-201ENST00000384254 SYNE4Q8N205 404 aa6.3□□□□□ -1.4
RNU6-40P-201ENST00000384254 ZNF276Q8N554 614 aa6.3□□□□□ -1.4
RNU6-40P-201ENST00000384254 CPEB3Q8NE35 698 aaKnown RBP6.3□□□□□ -1.4
RNU6-40P-201ENST00000384254 PNISRQ8TF01 805 aaKnown RBP6.3□□□□□ -1.4
RNU6-40P-201ENST00000384254 TMEM171Q8WVE6 324 aa6.3□□□□□ -1.4
RNU6-40P-201ENST00000384254 OSCP1Q8WVF1 389 aa6.3□□□□□ -1.4
RNU6-40P-201ENST00000384254 EID2BQ96D98 161 aa6.3□□□□□ -1.4
RNU6-40P-201ENST00000384254 ZSCAN31Q96LW9 406 aaPredicted RBP6.3□□□□□ -1.4
RNU6-40P-201ENST00000384254 WWC2-AS2Q96NR7 200 aa6.3□□□□□ -1.4
RNU6-40P-201ENST00000384254 HIST1H2AAQ96QV6 131 aa6.3□□□□□ -1.4
RNU6-40P-201ENST00000384254 ACTRT3Q9BYD9 372 aa6.3□□□□□ -1.4
RNU6-40P-201ENST00000384254 UBA5Q9GZZ9 404 aa6.3□□□□□ -1.4
RNU6-40P-201ENST00000384254 TMEM74BQ9NUR3 256 aa6.3□□□□□ -1.4
RNU6-40P-201ENST00000384254 BTBD11A6QL63 1104 aa6.29□□□□□ -1.4
RNU6-40P-201ENST00000384254 FCHO1O14526 889 aa6.29□□□□□ -1.4
RNU6-40P-201ENST00000384254 HGFP14210 728 aa6.29□□□□□ -1.4
RNU6-40P-201ENST00000384254 HOXA5P20719 270 aa6.29□□□□□ -1.4
RNU6-40P-201ENST00000384254 BCAT1P54687 386 aa6.29□□□□□ -1.4
RNU6-40P-201ENST00000384254 FAM189BP81408 668 aa6.29□□□□□ -1.4
RNU6-40P-201ENST00000384254 TRIM71Q2Q1W2 868 aaKnown RBP6.29□□□□□ -1.4
RNU6-40P-201ENST00000384254 BEAN1Q3B7T3 259 aa6.29□□□□□ -1.4
RNU6-40P-201ENST00000384254 ADCK5Q3MIX3 580 aa6.29□□□□□ -1.4
RNU6-40P-201ENST00000384254 TEDDM1Q5T9Z0 273 aa6.29□□□□□ -1.4
RNU6-40P-201ENST00000384254 ATPAF1Q5TC12 328 aaPredicted RBP6.29□□□□□ -1.4
RNU6-40P-201ENST00000384254 CCDC70Q6NSX1 233 aa6.29□□□□□ -1.4
RNU6-40P-201ENST00000384254 C1orf210Q8IVY1 113 aa6.29□□□□□ -1.4
RNU6-40P-201ENST00000384254 EVI5LQ96CN4 794 aa6.29□□□□□ -1.4
RNU6-40P-201ENST00000384254 INO80BQ9C086 356 aaPredicted RBP6.29□□□□□ -1.4
RNU6-40P-201ENST00000384254 ZNF768Q9H5H4 540 aaKnown RBP6.29□□□□□ -1.4
RNU6-40P-201ENST00000384254 AS3MTQ9HBK9 375 aa6.29□□□□□ -1.4
RNU6-40P-201ENST00000384254 TBCCD1Q9NVR7 557 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms