RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 CLPTM1LQ96KA5 538 aa9.76□□□□□ -0.85
PTPRA-204ENST00000380393 NOC4LQ9BVI4 516 aaKnown RBP9.76□□□□□ -0.85
PTPRA-204ENST00000380393 PDGFDQ9GZP0 370 aaPredicted RBP9.76□□□□□ -0.85
PTPRA-204ENST00000380393 KLC2Q9H0B6 622 aa9.76□□□□□ -0.85
PTPRA-204ENST00000380393 MOCS1Q9NZB8 636 aa9.76□□□□□ -0.85
PTPRA-204ENST00000380393 ARMCX3Q9UH62 379 aaPredicted RBP9.76□□□□□ -0.85
PTPRA-204ENST00000380393 PCDHGB4Q9UN71 923 aa9.76□□□□□ -0.85
PTPRA-204ENST00000380393 PCDHGB5Q9Y5G0 923 aa9.76□□□□□ -0.85
PTPRA-204ENST00000380393 SQORQ9Y6N5 450 aa9.76□□□□□ -0.85
PTPRA-204ENST00000380393 TJP1Q07157 1748 aa9.76□□□□□ -0.85
PTPRA-204ENST00000380393 GAKO14976 1311 aa9.76□□□□□ -0.85
PTPRA-204ENST00000380393 LRRC53A6NM62 1247 aa9.76□□□□□ -0.85
PTPRA-204ENST00000380393 MINDY4BA8MYZ0 360 aa9.76□□□□□ -0.85
PTPRA-204ENST00000380393 SNAP23O00161 211 aa9.76□□□□□ -0.85
PTPRA-204ENST00000380393 ZC3H11AO75152 810 aaKnown RBP eCLIP9.76□□□□□ -0.851e-7■■□□□ 11.9
PTPRA-204ENST00000380393 M6PRP20645 277 aa9.76□□□□□ -0.85
PTPRA-204ENST00000380393 CENPAP49450 140 aa9.76□□□□□ -0.85
PTPRA-204ENST00000380393 CLK1P49759 484 aaKnown RBP9.76□□□□□ -0.85
PTPRA-204ENST00000380393 CETN1Q12798 172 aa9.76□□□□□ -0.85
PTPRA-204ENST00000380393 SELENBP1Q13228 472 aa9.76□□□□□ -0.85
PTPRA-204ENST00000380393 OASLQ15646 514 aaKnown RBP9.76□□□□□ -0.85
PTPRA-204ENST00000380393 NPTX1Q15818 432 aa9.76□□□□□ -0.85
PTPRA-204ENST00000380393 TMCO4Q5TGY1 634 aa9.76□□□□□ -0.85
PTPRA-204ENST00000380393 IFNL1Q8IU54 200 aa9.76□□□□□ -0.85
PTPRA-204ENST00000380393 FLAD1Q8NFF5 587 aa9.76□□□□□ -0.85
PTPRA-204ENST00000380393 ANGPTL6Q8NI99 470 aa9.76□□□□□ -0.85
PTPRA-204ENST00000380393 SCFD1Q8WVM8 642 aa9.76□□□□□ -0.85
PTPRA-204ENST00000380393 ANKS1AQ92625 1134 aa9.76□□□□□ -0.85
PTPRA-204ENST00000380393 DACT3Q96B18 629 aaPredicted RBP9.76□□□□□ -0.85
PTPRA-204ENST00000380393 SERHL2Q9H4I8 314 aa9.76□□□□□ -0.85
PTPRA-204ENST00000380393 ZNF696Q9H7X3 374 aa9.76□□□□□ -0.85
PTPRA-204ENST00000380393 SP140LQ9H930 580 aa9.76□□□□□ -0.85
PTPRA-204ENST00000380393 MAP3K20Q9NYL2 800 aaKnown RBP9.76□□□□□ -0.85
PTPRA-204ENST00000380393 STMN3Q9NZ72 180 aa9.76□□□□□ -0.85
PTPRA-204ENST00000380393 TXNDC16Q9P2K2 825 aa9.76□□□□□ -0.85
PTPRA-204ENST00000380393 FLT1P17948 1338 aa9.76□□□□□ -0.85
PTPRA-204ENST00000380393 A0A1W2PRG0 241 aa9.76□□□□□ -0.85
PTPRA-204ENST00000380393 CAPN8A6NHC0 703 aa9.76□□□□□ -0.85
PTPRA-204ENST00000380393 B2RBV5 119 aa9.76□□□□□ -0.85
PTPRA-204ENST00000380393 ZW10O43264 779 aa9.76□□□□□ -0.85
PTPRA-204ENST00000380393 EDF1O60869 148 aaKnown RBP9.76□□□□□ -0.85
PTPRA-204ENST00000380393 PLEKHA8P1O95397 391 aa9.76□□□□□ -0.85
PTPRA-204ENST00000380393 ACSL3O95573 720 aa9.76□□□□□ -0.85
PTPRA-204ENST00000380393 SRGAP2CP0DJJ0 459 aa9.76□□□□□ -0.85
PTPRA-204ENST00000380393 SRGAP2BP0DMP2 458 aa9.76□□□□□ -0.85
PTPRA-204ENST00000380393 PMS1P54277 932 aaKnown RBP9.76□□□□□ -0.85
PTPRA-204ENST00000380393 MYBPC1Q00872 1141 aa9.76□□□□□ -0.85
PTPRA-204ENST00000380393 LRRC63Q05C16 580 aa9.76□□□□□ -0.85
PTPRA-204ENST00000380393 APOFQ13790 326 aa9.76□□□□□ -0.85
PTPRA-204ENST00000380393 ARSHQ5FYA8 562 aa9.76□□□□□ -0.85
PTPRA-204ENST00000380393 ZNF658Q5TYW1 1059 aaPredicted RBP9.76□□□□□ -0.85
PTPRA-204ENST00000380393 PLEKHA7Q6IQ23 1121 aa9.76□□□□□ -0.85
PTPRA-204ENST00000380393 IGDCC4Q8TDY8 1250 aa9.76□□□□□ -0.85
PTPRA-204ENST00000380393 ZNF486Q96H40 463 aaPredicted RBP9.76□□□□□ -0.85
PTPRA-204ENST00000380393 CSRNP1Q96S65 589 aa9.76□□□□□ -0.85
PTPRA-204ENST00000380393 THTPAQ9BU02 230 aa9.76□□□□□ -0.85
PTPRA-204ENST00000380393 CNNM2Q9H8M5 875 aa9.76□□□□□ -0.85
PTPRA-204ENST00000380393 GPAMQ9HCL2 828 aa9.76□□□□□ -0.85
PTPRA-204ENST00000380393 S100A14Q9HCY8 104 aa9.76□□□□□ -0.85
PTPRA-204ENST00000380393 ERGIC3Q9Y282 383 aa9.76□□□□□ -0.85
PTPRA-204ENST00000380393 RTCBQ9Y3I0 505 aaKnown RBP9.76□□□□□ -0.85
PTPRA-204ENST00000380393 V9GY48 417 aaPredicted RBP9.76□□□□□ -0.85
PTPRA-204ENST00000380393 RPN1P04843 607 aaKnown RBP9.75□□□□□ -0.85
PTPRA-204ENST00000380393 CD48P09326 243 aa9.75□□□□□ -0.85
PTPRA-204ENST00000380393 EVI2BP34910 448 aa9.75□□□□□ -0.85
PTPRA-204ENST00000380393 FIGNQ5HY92 759 aa9.75□□□□□ -0.85
PTPRA-204ENST00000380393 DUPD1Q68J44 220 aa9.75□□□□□ -0.85
PTPRA-204ENST00000380393 MFSD6Q6ZSS7 791 aa9.75□□□□□ -0.85
PTPRA-204ENST00000380393 ZBTB46Q86UZ6 589 aa9.75□□□□□ -0.85
PTPRA-204ENST00000380393 CCDC28AQ8IWP9 274 aa9.75□□□□□ -0.85
PTPRA-204ENST00000380393 APPL2Q8NEU8 664 aa9.75□□□□□ -0.85
PTPRA-204ENST00000380393 TMEM87BQ96K49 555 aa9.75□□□□□ -0.85
PTPRA-204ENST00000380393 SERPINB12Q96P63 405 aa9.75□□□□□ -0.85
PTPRA-204ENST00000380393 FOXP1Q9H334 677 aaPredicted RBP9.75□□□□□ -0.85
PTPRA-204ENST00000380393 FARSBQ9NSD9 589 aaKnown RBP9.75□□□□□ -0.85
PTPRA-204ENST00000380393 HEY2Q9UBP5 337 aa9.75□□□□□ -0.85
PTPRA-204ENST00000380393 POLHQ9Y253 713 aa9.75□□□□□ -0.85
PTPRA-204ENST00000380393 H3BRJ5 948 aa9.75□□□□□ -0.85
PTPRA-204ENST00000380393 MAGEC1O60732 1142 aa9.75□□□□□ -0.85
PTPRA-204ENST00000380393 DEXIO95424 95 aa9.75□□□□□ -0.85
PTPRA-204ENST00000380393 RPA1P27694 616 aa9.75□□□□□ -0.85
PTPRA-204ENST00000380393 MLLT6P55198 1093 aaPredicted RBP9.75□□□□□ -0.85
PTPRA-204ENST00000380393 METTL24Q5JXM2 366 aa9.75□□□□□ -0.85
PTPRA-204ENST00000380393 OTOP3Q7RTS5 596 aa9.75□□□□□ -0.85
PTPRA-204ENST00000380393 ADGRG6Q86SQ4 1221 aa9.75□□□□□ -0.85
PTPRA-204ENST00000380393 GLG1Q92896 1179 aa9.75□□□□□ -0.85
PTPRA-204ENST00000380393 MAP6Q96JE9 813 aa9.75□□□□□ -0.85
PTPRA-204ENST00000380393 ATP13A3Q9H7F0 1226 aa9.75□□□□□ -0.85
PTPRA-204ENST00000380393 SLC38A10Q9HBR0 1119 aa9.75□□□□□ -0.85
PTPRA-204ENST00000380393 MOV10Q9HCE1 1003 aaKnown RBP9.75□□□□□ -0.85
PTPRA-204ENST00000380393 CD209Q9NNX6 404 aa9.75□□□□□ -0.85
PTPRA-204ENST00000380393 ANLNQ9NQW6 1124 aa9.75□□□□□ -0.85
PTPRA-204ENST00000380393 ZNF277Q9NRM2 450 aaPredicted RBP9.75□□□□□ -0.85
PTPRA-204ENST00000380393 BCAP29Q9UHQ4 241 aa9.75□□□□□ -0.85
PTPRA-204ENST00000380393 ADAMTS6Q9UKP5 1117 aa9.75□□□□□ -0.85
PTPRA-204ENST00000380393 ZNF652Q9Y2D9 606 aa9.75□□□□□ -0.85
PTPRA-204ENST00000380393 DTNAQ9Y4J8 743 aa9.75□□□□□ -0.85
PTPRA-204ENST00000380393 ABCB11O95342 1321 aa9.75□□□□□ -0.85
PTPRA-204ENST00000380393 XDHP47989 1333 aa9.75□□□□□ -0.85
PTPRA-204ENST00000380393 ZNF532Q9HCE3 1301 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms