RNA–Protein interactions for RNA: ENST00000379446.9

NEDD9-202, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NEDD9, Length 4,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-202ENST00000379446 CACNA1BQ00975 2339 aa6.84□□□□□ -1.31
NEDD9-202ENST00000379446 ESYT3A0FGR9 886 aa6.84□□□□□ -1.31
NEDD9-202ENST00000379446 SOWAHBA6NEL2 793 aa6.84□□□□□ -1.31
NEDD9-202ENST00000379446 C1QTNF3-AMACRE9PGA6 284 aa6.84□□□□□ -1.31
NEDD9-202ENST00000379446 NPM3O75607 178 aaKnown RBP6.84□□□□□ -1.31
NEDD9-202ENST00000379446 IQCF3P0C7M6 154 aa6.84□□□□□ -1.31
NEDD9-202ENST00000379446 TBXAS1P24557 533 aaPredicted RBP6.84□□□□□ -1.31
NEDD9-202ENST00000379446 TIE1P35590 1138 aa6.84□□□□□ -1.31
NEDD9-202ENST00000379446 ARRB1P49407 418 aaPredicted RBP6.84□□□□□ -1.31
NEDD9-202ENST00000379446 VAMP7P51809 220 aa6.84□□□□□ -1.31
NEDD9-202ENST00000379446 SNCBQ16143 134 aa6.84□□□□□ -1.31
NEDD9-202ENST00000379446 TCEAL5Q5H9L2 206 aa6.84□□□□□ -1.31
NEDD9-202ENST00000379446 GRAMD4Q6IC98 578 aa6.84□□□□□ -1.31
NEDD9-202ENST00000379446 RETSATQ6NUM9 610 aa6.84□□□□□ -1.31
NEDD9-202ENST00000379446 PRSS55Q6UWB4 352 aaPredicted RBP6.84□□□□□ -1.31
NEDD9-202ENST00000379446 TRMT11Q7Z4G4 463 aaKnown RBP6.84□□□□□ -1.31
NEDD9-202ENST00000379446 SH3RF1Q7Z6J0 888 aa6.84□□□□□ -1.31
NEDD9-202ENST00000379446 PAIP2Q9BPZ3 127 aaKnown RBP6.84□□□□□ -1.31
NEDD9-202ENST00000379446 SELENOSQ9BQE4 189 aa6.84□□□□□ -1.31
NEDD9-202ENST00000379446 NDST4Q9H3R1 872 aa6.84□□□□□ -1.31
NEDD9-202ENST00000379446 FBXO44Q9H4M3 255 aa6.84□□□□□ -1.31
NEDD9-202ENST00000379446 DDIT4Q9NX09 232 aa6.84□□□□□ -1.31
NEDD9-202ENST00000379446 ASIC3Q9UHC3 531 aa6.84□□□□□ -1.31
NEDD9-202ENST00000379446 ANAPC4Q9UJX5 808 aa6.84□□□□□ -1.31
NEDD9-202ENST00000379446 SMIM35A0A1B0GVV1 85 aa6.84□□□□□ -1.31
NEDD9-202ENST00000379446 NEDD8-MDP1E9PL57 170 aa6.84□□□□□ -1.31
NEDD9-202ENST00000379446 CHUKO15111 745 aa6.84□□□□□ -1.31
NEDD9-202ENST00000379446 ESRRBO95718 433 aa6.84□□□□□ -1.31
NEDD9-202ENST00000379446 CHKAP35790 457 aa6.84□□□□□ -1.31
NEDD9-202ENST00000379446 BMPR1AP36894 532 aa6.84□□□□□ -1.31
NEDD9-202ENST00000379446 ARHGAP25P42331 645 aa6.84□□□□□ -1.31
NEDD9-202ENST00000379446 DEUP1Q05D60 604 aa6.84□□□□□ -1.31
NEDD9-202ENST00000379446 PRKAA1Q13131 559 aa6.84□□□□□ -1.31
NEDD9-202ENST00000379446 SGSM1Q2NKQ1 1148 aa6.84□□□□□ -1.31
NEDD9-202ENST00000379446 KRT39Q6A163 491 aa6.84□□□□□ -1.31
NEDD9-202ENST00000379446 HIBCHQ6NVY1 386 aaPredicted RBP6.84□□□□□ -1.31
NEDD9-202ENST00000379446 ZNF852Q6ZMS4 543 aa6.84□□□□□ -1.31
NEDD9-202ENST00000379446 PRPF39Q86UA1 669 aaKnown RBP6.84□□□□□ -1.31
NEDD9-202ENST00000379446 OR14C36Q8NHC7 312 aa6.84□□□□□ -1.31
NEDD9-202ENST00000379446 UBA3Q8TBC4 463 aa6.84□□□□□ -1.31
NEDD9-202ENST00000379446 KAT2BQ92831 832 aa6.84□□□□□ -1.31
NEDD9-202ENST00000379446 TIPINQ9BVW5 301 aa6.84□□□□□ -1.31
NEDD9-202ENST00000379446 TRIM31Q9BZY9 425 aa6.84□□□□□ -1.31
NEDD9-202ENST00000379446 RANBP17Q9H2T7 1088 aaKnown RBP6.84□□□□□ -1.31
NEDD9-202ENST00000379446 GTF3C4Q9UKN8 822 aa6.84□□□□□ -1.31
NEDD9-202ENST00000379446 L1RE1Q9UN81 338 aa6.84□□□□□ -1.31
NEDD9-202ENST00000379446 HYOU1Q9Y4L1 999 aa6.84□□□□□ -1.31
NEDD9-202ENST00000379446 PCDHA13Q9Y5I0 950 aa6.84□□□□□ -1.31
NEDD9-202ENST00000379446 NPHP3-ACAD11A0A0J9YXS1 232 aa6.84□□□□□ -1.32
NEDD9-202ENST00000379446 LRRC53A6NM62 1247 aa6.84□□□□□ -1.32
NEDD9-202ENST00000379446 FAM170BA6NMN3 283 aa6.84□□□□□ -1.32
NEDD9-202ENST00000379446 CFAP99D6REC4 459 aa6.84□□□□□ -1.32
NEDD9-202ENST00000379446 KDM1AO60341 852 aa6.84□□□□□ -1.32
NEDD9-202ENST00000379446 NR3C1P04150 777 aa6.84□□□□□ -1.32
NEDD9-202ENST00000379446 RB1P06400 928 aa6.84□□□□□ -1.32
NEDD9-202ENST00000379446 GSTA1P08263 222 aa6.84□□□□□ -1.32
NEDD9-202ENST00000379446 GSTA2P09210 222 aa6.84□□□□□ -1.32
NEDD9-202ENST00000379446 ATP5C1P36542 298 aaKnown RBP6.84□□□□□ -1.32
NEDD9-202ENST00000379446 TPI1P60174 286 aa6.84□□□□□ -1.32
NEDD9-202ENST00000379446 EHHADHQ08426 723 aa6.84□□□□□ -1.32
NEDD9-202ENST00000379446 THOC5Q13769 683 aaKnown RBP6.84□□□□□ -1.32
NEDD9-202ENST00000379446 ARMC3Q5W041 872 aa6.84□□□□□ -1.32
NEDD9-202ENST00000379446 CCDC170Q8IYT3 715 aa6.84□□□□□ -1.32
NEDD9-202ENST00000379446 ATAD1Q8NBU5 361 aa6.84□□□□□ -1.32
NEDD9-202ENST00000379446 ZBTB10Q96DT7 871 aa6.84□□□□□ -1.32
NEDD9-202ENST00000379446 CCDC3Q9BQI4 270 aa6.84□□□□□ -1.32
NEDD9-202ENST00000379446 GPR63Q9BZJ6 419 aa6.84□□□□□ -1.32
NEDD9-202ENST00000379446 TRIM9Q9C026 710 aa6.84□□□□□ -1.32
NEDD9-202ENST00000379446 DCLK3Q9C098 648 aa6.84□□□□□ -1.32
NEDD9-202ENST00000379446 UBE2ZQ9H832 354 aaPredicted RBP6.84□□□□□ -1.32
NEDD9-202ENST00000379446 MAGEF1Q9HAY2 307 aa6.84□□□□□ -1.32
NEDD9-202ENST00000379446 SMYD2Q9NRG4 433 aa6.84□□□□□ -1.32
NEDD9-202ENST00000379446 SPATS2LQ9NUQ6 558 aaKnown RBP6.84□□□□□ -1.32
NEDD9-202ENST00000379446 ADAM22Q9P0K1 906 aa6.84□□□□□ -1.32
NEDD9-202ENST00000379446 CAPN11Q9UMQ6 739 aa6.84□□□□□ -1.32
NEDD9-202ENST00000379446 ARFGEF2Q9Y6D5 1785 aa6.83□□□□□ -1.32
NEDD9-202ENST00000379446 FAM86C2PA6NEL3 165 aa6.83□□□□□ -1.32
NEDD9-202ENST00000379446 PHF20L1A8MW92 1017 aa6.83□□□□□ -1.32
NEDD9-202ENST00000379446 MAGEC1O60732 1142 aa6.83□□□□□ -1.32
NEDD9-202ENST00000379446 FGF19O95750 216 aa6.83□□□□□ -1.32
NEDD9-202ENST00000379446 PYGMP11217 842 aa6.83□□□□□ -1.32
NEDD9-202ENST00000379446 RALBP11234 206 aa6.83□□□□□ -1.32
NEDD9-202ENST00000379446 GJA1P17302 382 aa6.83□□□□□ -1.32
NEDD9-202ENST00000379446 RHOAP61586 193 aa6.83□□□□□ -1.32
NEDD9-202ENST00000379446 GUCY2DQ02846 1103 aa6.83□□□□□ -1.32
NEDD9-202ENST00000379446 FUT2Q10981 343 aa6.83□□□□□ -1.32
NEDD9-202ENST00000379446 MESDQ14696 234 aa6.83□□□□□ -1.32
NEDD9-202ENST00000379446 DCLRE1AQ6PJP8 1040 aa6.83□□□□□ -1.32
NEDD9-202ENST00000379446 ARHGEF18Q6ZSZ5 1173 aa6.83□□□□□ -1.32
NEDD9-202ENST00000379446 GRIN3AQ8TCU5 1115 aa6.83□□□□□ -1.32
NEDD9-202ENST00000379446 ZFP42Q96MM3 310 aa6.83□□□□□ -1.32
NEDD9-202ENST00000379446 MTMR9Q96QG7 549 aa6.83□□□□□ -1.32
NEDD9-202ENST00000379446 C17orf80Q9BSJ5 609 aa6.83□□□□□ -1.32
NEDD9-202ENST00000379446 PACSIN2Q9UNF0 486 aaPredicted RBP6.83□□□□□ -1.32
NEDD9-202ENST00000379446 PCDHA11Q9Y5I1 949 aa6.83□□□□□ -1.32
NEDD9-202ENST00000379446 HEY1Q9Y5J3 304 aa6.83□□□□□ -1.32
NEDD9-202ENST00000379446 MRPL42Q9Y6G3 142 aaKnown RBP6.83□□□□□ -1.32
NEDD9-202ENST00000379446 F5P12259 2224 aa6.83□□□□□ -1.32
NEDD9-202ENST00000379446 LRRC72A6NJI9 287 aa6.83□□□□□ -1.32
NEDD9-202ENST00000379446 F5H423 210 aaPredicted RBP6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms