RNA–Protein interactions for RNA: ENST00000376854.5

C9orf40-201, Transcript of chromosome 9 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf40, Length 2,327 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40-201ENST00000376854 TSHZ1Q6ZSZ6 1077 aa26.49■■□□□ 1.83
C9orf40-201ENST00000376854 CDR2LQ86X02 465 aaPredicted RBP26.49■■□□□ 1.83
C9orf40-201ENST00000376854 TCP10LQ8TDR4 215 aa26.49■■□□□ 1.83
C9orf40-201ENST00000376854 DCAKDQ8WVC6 231 aa26.49■■□□□ 1.83
C9orf40-201ENST00000376854 HSPH1Q92598 858 aa26.49■■□□□ 1.83
C9orf40-201ENST00000376854 INPP5DQ92835 1189 aa26.49■■□□□ 1.83
C9orf40-201ENST00000376854 NPHS2Q9NP85 383 aa26.49■■□□□ 1.83
C9orf40-201ENST00000376854 GOLGA8RI6L899 631 aa26.48■■□□□ 1.83
C9orf40-201ENST00000376854 APOC4-APOC2K7ER74 178 aa26.48■■□□□ 1.83
C9orf40-201ENST00000376854 APOC2P02655 101 aa26.48■■□□□ 1.83
C9orf40-201ENST00000376854 TAF5Q15542 800 aa26.48■■□□□ 1.83
C9orf40-201ENST00000376854 TMEM132AQ24JP5 1023 aa26.48■■□□□ 1.83
C9orf40-201ENST00000376854 ZNF667Q5HYK9 610 aa26.48■■□□□ 1.83
C9orf40-201ENST00000376854 ZNF449Q6P9G9 518 aa26.48■■□□□ 1.83
C9orf40-201ENST00000376854 TRIM50Q86XT4 487 aa26.48■■□□□ 1.83
C9orf40-201ENST00000376854 PTPRHQ9HD43 1115 aa26.48■■□□□ 1.83
C9orf40-201ENST00000376854 SMAPO00193 183 aa26.48■■□□□ 1.83
C9orf40-201ENST00000376854 T-ENOLP0DO92 83 aa26.48■■□□□ 1.83
C9orf40-201ENST00000376854 MIPP30301 263 aa26.48■■□□□ 1.83
C9orf40-201ENST00000376854 NCAPG2Q86XI2 1143 aa26.48■■□□□ 1.83
C9orf40-201ENST00000376854 CCDC125Q86Z20 511 aa26.48■■□□□ 1.83
C9orf40-201ENST00000376854 CMASQ8NFW8 434 aaPredicted RBP26.48■■□□□ 1.83
C9orf40-201ENST00000376854 NLGN2Q8NFZ4 835 aa26.48■■□□□ 1.83
C9orf40-201ENST00000376854 KLF6Q99612 283 aaPredicted RBP26.48■■□□□ 1.83
C9orf40-201ENST00000376854 BCO2Q9BYV7 579 aa26.48■■□□□ 1.83
C9orf40-201ENST00000376854 MCF2LO15068 1137 aa26.47■■□□□ 1.83
C9orf40-201ENST00000376854 TM9SF1O15321 606 aa26.47■■□□□ 1.83
C9orf40-201ENST00000376854 B4GALT5O43286 388 aa26.47■■□□□ 1.83
C9orf40-201ENST00000376854 GAS2O43903 313 aaKnown RBP26.47■■□□□ 1.83
C9orf40-201ENST00000376854 TGFB3P10600 412 aa26.47■■□□□ 1.83
C9orf40-201ENST00000376854 ATP2A2P16615 1042 aaKnown RBP26.47■■□□□ 1.83
C9orf40-201ENST00000376854 BANPQ8N9N5 519 aa26.47■■□□□ 1.83
C9orf40-201ENST00000376854 CALN1Q9BXU9 219 aa26.47■■□□□ 1.83
C9orf40-201ENST00000376854 ZBTB42B2RXF5 422 aa26.47■■□□□ 1.83
C9orf40-201ENST00000376854 RBP3P10745 1247 aa26.47■■□□□ 1.83
C9orf40-201ENST00000376854 RNASELQ05823 741 aaKnown RBP26.47■■□□□ 1.83
C9orf40-201ENST00000376854 DPYSL3Q14195 570 aa26.47■■□□□ 1.83
C9orf40-201ENST00000376854 NLRP9Q7RTR0 991 aa26.47■■□□□ 1.83
C9orf40-201ENST00000376854 ALKBH8Q96BT7 664 aaKnown RBP26.47■■□□□ 1.83
C9orf40-201ENST00000376854 SLC7A6OSQ96CW6 309 aaPredicted RBP26.47■■□□□ 1.83
C9orf40-201ENST00000376854 NLRP4Q96MN2 994 aa26.47■■□□□ 1.83
C9orf40-201ENST00000376854 SDCBP2Q9H190 292 aa26.47■■□□□ 1.83
C9orf40-201ENST00000376854 C12orf65Q9H3J6 166 aaKnown RBP26.47■■□□□ 1.83
C9orf40-201ENST00000376854 SLC17A7Q9P2U7 560 aa26.47■■□□□ 1.83
C9orf40-201ENST00000376854 CHMP2BQ9UQN3 213 aa26.47■■□□□ 1.83
C9orf40-201ENST00000376854 INO80B-WBP1J3KQ70 363 aa26.46■■□□□ 1.83
C9orf40-201ENST00000376854 ACKR2O00590 384 aa26.46■■□□□ 1.83
C9orf40-201ENST00000376854 RNF8O76064 485 aa26.46■■□□□ 1.83
C9orf40-201ENST00000376854 CXCL8P10145 99 aa26.46■■□□□ 1.83
C9orf40-201ENST00000376854 TAF1BQ53T94 588 aaPredicted RBP26.46■■□□□ 1.83
C9orf40-201ENST00000376854 SLC45A4Q5BKX6 768 aa26.46■■□□□ 1.83
C9orf40-201ENST00000376854 EEF1DP3Q658K8 133 aa26.46■■□□□ 1.83
C9orf40-201ENST00000376854 SMYD5Q6GMV2 418 aa26.46■■□□□ 1.83
C9orf40-201ENST00000376854 SPATA18Q8TC71 538 aa26.46■■□□□ 1.83
C9orf40-201ENST00000376854 INO80BQ9C086 356 aaPredicted RBP26.46■■□□□ 1.83
C9orf40-201ENST00000376854 SIX4Q9UIU6 781 aa26.46■■□□□ 1.83
C9orf40-201ENST00000376854 USP18Q9UMW8 372 aa26.46■■□□□ 1.83
C9orf40-201ENST00000376854 IGKV6-21A0A0C4DH24 114 aa26.45■■□□□ 1.83
C9orf40-201ENST00000376854 C2CD2LO14523 706 aa26.45■■□□□ 1.83
C9orf40-201ENST00000376854 CBX6O95503 412 aa26.45■■□□□ 1.83
C9orf40-201ENST00000376854 TRUB2O95900 331 aaKnown RBP26.45■■□□□ 1.83
C9orf40-201ENST00000376854 TROVE2P10155 538 aaKnown RBP eCLIP26.45■■□□□ 1.83
C9orf40-201ENST00000376854 NRLP54845 237 aa26.45■■□□□ 1.83
C9orf40-201ENST00000376854 RIOX2Q8IUF8 465 aa26.45■■□□□ 1.83
C9orf40-201ENST00000376854 TMEM192Q8IY95 271 aa26.45■■□□□ 1.83
C9orf40-201ENST00000376854 ZNF276Q8N554 614 aa26.45■■□□□ 1.83
C9orf40-201ENST00000376854 SLC4A11Q8NBS3 891 aa26.45■■□□□ 1.83
C9orf40-201ENST00000376854 TWNKQ96RR1 684 aa26.45■■□□□ 1.83
C9orf40-201ENST00000376854 HMGXB4Q9UGU5 601 aa26.45■■□□□ 1.83
C9orf40-201ENST00000376854 ZFP69BQ9UJL9 534 aa26.45■■□□□ 1.83
C9orf40-201ENST00000376854 GJB1P08034 283 aa26.45■■□□□ 1.82
C9orf40-201ENST00000376854 TSHRP16473 764 aa26.45■■□□□ 1.82
C9orf40-201ENST00000376854 RASSF2P50749 326 aa26.45■■□□□ 1.82
C9orf40-201ENST00000376854 CYTH2Q99418 400 aa26.45■■□□□ 1.82
C9orf40-201ENST00000376854 SMYD3Q9H7B4 428 aa26.45■■□□□ 1.82
C9orf40-201ENST00000376854 RPF1Q9H9Y2 349 aaKnown RBP26.45■■□□□ 1.82
C9orf40-201ENST00000376854 PPP2R3BQ9Y5P8 575 aa26.45■■□□□ 1.82
C9orf40-201ENST00000376854 MICAL2O94851 1124 aa26.44■■□□□ 1.82
C9orf40-201ENST00000376854 ARIH2O95376 493 aa26.44■■□□□ 1.82
C9orf40-201ENST00000376854 PTPN11Q06124 597 aaPredicted RBP26.44■■□□□ 1.82
C9orf40-201ENST00000376854 PLEKHG4Q58EX7 1191 aa26.44■■□□□ 1.82
C9orf40-201ENST00000376854 SPDYAQ5MJ70 313 aa26.44■■□□□ 1.82
C9orf40-201ENST00000376854 GADL1Q6ZQY3 521 aa26.44■■□□□ 1.82
C9orf40-201ENST00000376854 TMEM130Q8N3G9 435 aa26.44■■□□□ 1.82
C9orf40-201ENST00000376854 ZNF398Q8TD17 642 aa26.44■■□□□ 1.82
C9orf40-201ENST00000376854 TBC1D10AQ9BXI6 508 aa26.44■■□□□ 1.82
C9orf40-201ENST00000376854 VPS11Q9H270 941 aa26.44■■□□□ 1.82
C9orf40-201ENST00000376854 FZD8Q9H461 694 aa26.44■■□□□ 1.82
C9orf40-201ENST00000376854 ELK3P41970 407 aa26.44■■□□□ 1.82
C9orf40-201ENST00000376854 HSDL1Q3SXM5 330 aa26.44■■□□□ 1.82
C9orf40-201ENST00000376854 IGDCC3Q8IVU1 814 aa26.44■■□□□ 1.82
C9orf40-201ENST00000376854 EXOC8Q8IYI6 725 aa26.44■■□□□ 1.82
C9orf40-201ENST00000376854 C1orf127Q8N9H9 656 aa26.44■■□□□ 1.82
C9orf40-201ENST00000376854 MCRS1Q96EZ8 462 aa26.44■■□□□ 1.82
C9orf40-201ENST00000376854 GPR20Q99678 358 aa26.44■■□□□ 1.82
C9orf40-201ENST00000376854 SPATC1LQ9H0A9 340 aa26.44■■□□□ 1.82
C9orf40-201ENST00000376854 MANSC1Q9H8J5 431 aa26.44■■□□□ 1.82
C9orf40-201ENST00000376854 RSAD1Q9HA92 442 aa26.44■■□□□ 1.82
C9orf40-201ENST00000376854 DCTN4Q9UJW0 460 aa26.44■■□□□ 1.82
C9orf40-201ENST00000376854 MT-ND3P03897 115 aa26.43■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms