RNA–Protein interactions for RNA: ENST00000376496.4

CLCN6-206, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5 BASIC

Gene CLCN6, Length 2,922 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-206ENST00000376496 SLC25A11Q02978 314 aaKnown RBP13.24□□□□□ -0.29
CLCN6-206ENST00000376496 GPNMBQ14956 572 aa13.24□□□□□ -0.29
CLCN6-206ENST00000376496 CLLU1OSQ5K130 101 aa13.24□□□□□ -0.29
CLCN6-206ENST00000376496 ARHGAP17Q68EM7 881 aa13.24□□□□□ -0.29
CLCN6-206ENST00000376496 CD300LGQ6UXG3 332 aa13.24□□□□□ -0.29
CLCN6-206ENST00000376496 LRRC8DQ7L1W4 858 aa13.24□□□□□ -0.29
CLCN6-206ENST00000376496 MAATS1Q7Z4T9 603 aa13.24□□□□□ -0.29
CLCN6-206ENST00000376496 ZNF598Q86UK7 904 aaKnown RBP13.24□□□□□ -0.29
CLCN6-206ENST00000376496 ANKRD52Q8NB46 1076 aa13.24□□□□□ -0.29
CLCN6-206ENST00000376496 SCLYQ96I15 445 aa13.24□□□□□ -0.29
CLCN6-206ENST00000376496 SLITRK1Q96PX8 696 aa13.24□□□□□ -0.29
CLCN6-206ENST00000376496 TMEM209Q96SK2 561 aa13.24□□□□□ -0.29
CLCN6-206ENST00000376496 ADAM33Q9BZ11 813 aa13.24□□□□□ -0.29
CLCN6-206ENST00000376496 GPATCH2LQ9NWQ4 482 aa13.24□□□□□ -0.29
CLCN6-206ENST00000376496 WDR35Q9P2L0 1181 aa13.24□□□□□ -0.29
CLCN6-206ENST00000376496 MTUS1Q9ULD2 1270 aa13.24□□□□□ -0.29
CLCN6-206ENST00000376496 POLR3GO15318 223 aaPredicted RBP13.24□□□□□ -0.29
CLCN6-206ENST00000376496 DDHD2O94830 711 aa13.24□□□□□ -0.29
CLCN6-206ENST00000376496 VPS41P49754 854 aa13.24□□□□□ -0.29
CLCN6-206ENST00000376496 BCAR1P56945 870 aa13.24□□□□□ -0.29
CLCN6-206ENST00000376496 TAP1Q03518 808 aa13.24□□□□□ -0.29
CLCN6-206ENST00000376496 SCYL2Q6P3W7 929 aa13.24□□□□□ -0.29
CLCN6-206ENST00000376496 KCNK16Q96T55 309 aa13.24□□□□□ -0.29
CLCN6-206ENST00000376496 MAGEB5Q9BZ81 275 aa13.24□□□□□ -0.29
CLCN6-206ENST00000376496 C10orf88Q9H8K7 445 aa13.24□□□□□ -0.29
CLCN6-206ENST00000376496 NGRNQ9NPE2 291 aaKnown RBP13.24□□□□□ -0.29
CLCN6-206ENST00000376496 HPCAL4Q9UM19 191 aa13.24□□□□□ -0.29
CLCN6-206ENST00000376496 C2CD4BA6NLJ0 364 aa13.23□□□□□ -0.29
CLCN6-206ENST00000376496 C9IYK1 514 aa13.23□□□□□ -0.29
CLCN6-206ENST00000376496 GPD1P21695 349 aa13.23□□□□□ -0.29
CLCN6-206ENST00000376496 RAB27AP51159 221 aa13.23□□□□□ -0.29
CLCN6-206ENST00000376496 EPHB4P54760 987 aa13.23□□□□□ -0.29
CLCN6-206ENST00000376496 MAP3K7CLP57077 242 aa13.23□□□□□ -0.29
CLCN6-206ENST00000376496 BST2Q10589 180 aaKnown RBP13.23□□□□□ -0.29
CLCN6-206ENST00000376496 B4GALNT4Q76KP1 1039 aa13.23□□□□□ -0.29
CLCN6-206ENST00000376496 PIGZQ86VD9 579 aa13.23□□□□□ -0.29
CLCN6-206ENST00000376496 KRT222Q8N1A0 295 aa13.23□□□□□ -0.29
CLCN6-206ENST00000376496 DBF4BQ8NFT6 615 aa13.23□□□□□ -0.29
CLCN6-206ENST00000376496 EXD1Q8NHP7 514 aa13.23□□□□□ -0.29
CLCN6-206ENST00000376496 LAMA2P24043 3122 aaKnown RBP13.23□□□□□ -0.29
CLCN6-206ENST00000376496 GABRDO14764 452 aa13.23□□□□□ -0.29
CLCN6-206ENST00000376496 CCL5P13501 91 aa13.23□□□□□ -0.29
CLCN6-206ENST00000376496 CHRNA3P32297 505 aa13.23□□□□□ -0.29
CLCN6-206ENST00000376496 BCAT1P54687 386 aa13.23□□□□□ -0.29
CLCN6-206ENST00000376496 GYS2P54840 703 aa13.23□□□□□ -0.29
CLCN6-206ENST00000376496 CCL23P55773 120 aa13.23□□□□□ -0.29
CLCN6-206ENST00000376496 KLF1Q13351 362 aaPredicted RBP13.23□□□□□ -0.29
CLCN6-206ENST00000376496 ARHGEF6Q15052 776 aa13.23□□□□□ -0.29
CLCN6-206ENST00000376496 STILQ15468 1287 aa13.23□□□□□ -0.29
CLCN6-206ENST00000376496 CCDC14Q49A88 953 aa13.23□□□□□ -0.29
CLCN6-206ENST00000376496 ODF2Q5BJF6 829 aa13.23□□□□□ -0.29
CLCN6-206ENST00000376496 SPOCD1Q6ZMY3 1216 aa13.23□□□□□ -0.29
CLCN6-206ENST00000376496 TMEM110Q86TL2 294 aa13.23□□□□□ -0.29
CLCN6-206ENST00000376496 FAM126BQ8IXS8 530 aa13.23□□□□□ -0.29
CLCN6-206ENST00000376496 NIPA2Q8N8Q9 360 aa13.23□□□□□ -0.29
CLCN6-206ENST00000376496 TNIP3Q96KP6 325 aa13.23□□□□□ -0.29
CLCN6-206ENST00000376496 SYT15Q9BQS2 421 aa13.23□□□□□ -0.29
CLCN6-206ENST00000376496 KRT82Q9NSB4 513 aa13.23□□□□□ -0.29
CLCN6-206ENST00000376496 DNAJB4Q9UDY4 337 aa13.23□□□□□ -0.29
CLCN6-206ENST00000376496 PRG3Q9Y2Y8 225 aaPredicted RBP13.23□□□□□ -0.29
CLCN6-206ENST00000376496 UTP11Q9Y3A2 253 aaKnown RBP13.23□□□□□ -0.29
CLCN6-206ENST00000376496 RPLP2P05387 115 aaKnown RBP13.23□□□□□ -0.29
CLCN6-206ENST00000376496 SLC6A3Q01959 620 aa13.23□□□□□ -0.29
CLCN6-206ENST00000376496 ADIGQ0VDE8 80 aa13.23□□□□□ -0.29
CLCN6-206ENST00000376496 MMRN1Q13201 1228 aa13.23□□□□□ -0.29
CLCN6-206ENST00000376496 PGBD4Q96DM1 585 aa13.23□□□□□ -0.29
CLCN6-206ENST00000376496 CCDC114Q96M63 670 aa13.23□□□□□ -0.29
CLCN6-206ENST00000376496 TSPAN18Q96SJ8 248 aa13.23□□□□□ -0.29
CLCN6-206ENST00000376496 RTP3Q9BQQ7 232 aa13.23□□□□□ -0.29
CLCN6-206ENST00000376496 BEGAINQ9BUH8 593 aa13.23□□□□□ -0.29
CLCN6-206ENST00000376496 PLVAPQ9BX97 442 aa13.23□□□□□ -0.29
CLCN6-206ENST00000376496 PPP1R12CQ9BZL4 782 aa13.23□□□□□ -0.29
CLCN6-206ENST00000376496 DCLK3Q9C098 648 aa13.23□□□□□ -0.29
CLCN6-206ENST00000376496 RGS18Q9NS28 235 aa13.23□□□□□ -0.29
CLCN6-206ENST00000376496 RPL21P46778 160 aaKnown RBP13.22□□□□□ -0.29
CLCN6-206ENST00000376496 CDK7P50613 346 aa13.22□□□□□ -0.29
CLCN6-206ENST00000376496 ZNF143P52747 638 aaPredicted RBP13.22□□□□□ -0.29
CLCN6-206ENST00000376496 PCED1BQ96HM7 432 aa13.22□□□□□ -0.29
CLCN6-206ENST00000376496 ERP44Q9BS26 406 aa13.22□□□□□ -0.29
CLCN6-206ENST00000376496 TRAIPQ9BWF2 469 aa13.22□□□□□ -0.29
CLCN6-206ENST00000376496 SAGE1Q9NXZ1 904 aa13.22□□□□□ -0.29
CLCN6-206ENST00000376496 USP18Q9UMW8 372 aa13.22□□□□□ -0.29
CLCN6-206ENST00000376496 SCN5AQ14524 2016 aa13.22□□□□□ -0.29
CLCN6-206ENST00000376496 RNF8O76064 485 aa13.22□□□□□ -0.29
CLCN6-206ENST00000376496 SELPP16109 830 aa13.22□□□□□ -0.29
CLCN6-206ENST00000376496 HSPA6P17066 643 aa13.22□□□□□ -0.29
CLCN6-206ENST00000376496 TNFRSF8P28908 595 aa13.22□□□□□ -0.29
CLCN6-206ENST00000376496 OAS2P29728 719 aaKnown RBP13.22□□□□□ -0.29
CLCN6-206ENST00000376496 PLTPP55058 493 aa13.22□□□□□ -0.29
CLCN6-206ENST00000376496 PITX1P78337 314 aaPredicted RBP13.22□□□□□ -0.29
CLCN6-206ENST00000376496 TUSC3Q13454 348 aa13.22□□□□□ -0.29
CLCN6-206ENST00000376496 CYP1B1Q16678 543 aa13.22□□□□□ -0.29
CLCN6-206ENST00000376496 CLEC20AQ6ZU45 233 aa13.22□□□□□ -0.29
CLCN6-206ENST00000376496 SLC24A5Q71RS6 500 aa13.22□□□□□ -0.29
CLCN6-206ENST00000376496 GPRIN1Q7Z2K8 1008 aa13.22□□□□□ -0.29
CLCN6-206ENST00000376496 RCOR2Q8IZ40 523 aa13.22□□□□□ -0.29
CLCN6-206ENST00000376496 FAM124BQ9H5Z6 455 aaPredicted RBP13.22□□□□□ -0.29
CLCN6-206ENST00000376496 TMLHEQ9NVH6 421 aa13.22□□□□□ -0.29
CLCN6-206ENST00000376496 SYNJ2BP-COX16A0A087WUM0 186 aa13.21□□□□□ -0.29
CLCN6-206ENST00000376496 C3orf70A6NLC5 250 aaPredicted RBP13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms