RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 TMEM132DQ14C87 1099 aa13.02□□□□□ -0.33
LSM2-208ENST00000375661 CCDC6Q16204 474 aa13.02□□□□□ -0.33
LSM2-208ENST00000375661 NFIL3Q16649 462 aa13.02□□□□□ -0.33
LSM2-208ENST00000375661 CAVIN1Q6NZI2 390 aaKnown RBP13.02□□□□□ -0.33
LSM2-208ENST00000375661 SYT13Q7L8C5 426 aa13.02□□□□□ -0.33
LSM2-208ENST00000375661 TMEM150AQ86TG1 271 aa13.02□□□□□ -0.33
LSM2-208ENST00000375661 MON1AQ86VX9 555 aa13.02□□□□□ -0.33
LSM2-208ENST00000375661 GPD1LQ8N335 351 aa13.02□□□□□ -0.33
LSM2-208ENST00000375661 MAB21L3Q8N8X9 362 aa13.02□□□□□ -0.33
LSM2-208ENST00000375661 GOLGA5Q8TBA6 731 aa13.02□□□□□ -0.33
LSM2-208ENST00000375661 MRPS31Q92665 395 aaKnown RBP13.02□□□□□ -0.33
LSM2-208ENST00000375661 USP13Q92995 863 aaPredicted RBP13.02□□□□□ -0.33
LSM2-208ENST00000375661 ACDQ96AP0 544 aa13.02□□□□□ -0.33
LSM2-208ENST00000375661 FAM212AQ96EL1 285 aa13.02□□□□□ -0.33
LSM2-208ENST00000375661 CHFRQ96EP1 664 aa13.02□□□□□ -0.33
LSM2-208ENST00000375661 DHTKD1Q96HY7 919 aaPredicted RBP13.02□□□□□ -0.33
LSM2-208ENST00000375661 P2RY13Q9BPV8 354 aa13.02□□□□□ -0.33
LSM2-208ENST00000375661 FAM213AQ9BRX8 229 aa13.02□□□□□ -0.33
LSM2-208ENST00000375661 SMG9Q9H0W8 520 aaKnown RBP13.02□□□□□ -0.33
LSM2-208ENST00000375661 DUSP15Q9H1R2 295 aaPredicted RBP13.02□□□□□ -0.33
LSM2-208ENST00000375661 EBF3Q9H4W6 596 aa13.02□□□□□ -0.33
LSM2-208ENST00000375661 UXTQ9UBK9 157 aaPredicted RBP13.02□□□□□ -0.33
LSM2-208ENST00000375661 TRIM49BA6NDI0 452 aa13.01□□□□□ -0.33
LSM2-208ENST00000375661 OTOL1A6NHN0 477 aaPredicted RBP13.01□□□□□ -0.33
LSM2-208ENST00000375661 CYB561D2O14569 222 aa13.01□□□□□ -0.33
LSM2-208ENST00000375661 KIAA0391O15091 583 aaKnown RBP13.01□□□□□ -0.33
LSM2-208ENST00000375661 CALUO43852 315 aaPredicted RBP13.01□□□□□ -0.33
LSM2-208ENST00000375661 APBB3O95704 486 aa13.01□□□□□ -0.33
LSM2-208ENST00000375661 LDHAP00338 332 aaKnown RBP13.01□□□□□ -0.33
LSM2-208ENST00000375661 NR3C1P04150 777 aa13.01□□□□□ -0.33
LSM2-208ENST00000375661 NFICP08651 508 aa13.01□□□□□ -0.33
LSM2-208ENST00000375661 CSH1P0DML2 217 aa13.01□□□□□ -0.33
LSM2-208ENST00000375661 CSH2P0DML3 217 aa13.01□□□□□ -0.33
LSM2-208ENST00000375661 HMGA1P17096 107 aaKnown RBP13.01□□□□□ -0.33
LSM2-208ENST00000375661 GALK1P51570 392 aa13.01□□□□□ -0.33
LSM2-208ENST00000375661 CYP2J2P51589 502 aa13.01□□□□□ -0.33
LSM2-208ENST00000375661 WNT7BP56706 349 aa13.01□□□□□ -0.33
LSM2-208ENST00000375661 ANKRD40Q6AI12 368 aa13.01□□□□□ -0.33
LSM2-208ENST00000375661 NT5DC4Q86YG4 428 aa13.01□□□□□ -0.33
LSM2-208ENST00000375661 CBWD2Q8IUF1 395 aa13.01□□□□□ -0.33
LSM2-208ENST00000375661 SLC9A9Q8IVB4 645 aa13.01□□□□□ -0.33
LSM2-208ENST00000375661 CPA6Q8N4T0 437 aa13.01□□□□□ -0.33
LSM2-208ENST00000375661 XXYLT1Q8NBI6 393 aa13.01□□□□□ -0.33
LSM2-208ENST00000375661 GIPC2Q8TF65 315 aa13.01□□□□□ -0.33
LSM2-208ENST00000375661 EDEM2Q9BV94 578 aa13.01□□□□□ -0.33
LSM2-208ENST00000375661 CCL26Q9Y258 94 aa13.01□□□□□ -0.33
LSM2-208ENST00000375661 PCDHB5Q9Y5E4 795 aa13.01□□□□□ -0.33
LSM2-208ENST00000375661 PTPRDP23468 1912 aa13□□□□□ -0.33
LSM2-208ENST00000375661 BCLAF3A2AJT9 711 aaKnown RBP13□□□□□ -0.33
LSM2-208ENST00000375661 CAVIN2O95810 425 aa13□□□□□ -0.33
LSM2-208ENST00000375661 GJA4P35212 333 aa13□□□□□ -0.33
LSM2-208ENST00000375661 PPP1R2P41236 205 aa13□□□□□ -0.33
LSM2-208ENST00000375661 PNPLA4P41247 253 aa13□□□□□ -0.33
LSM2-208ENST00000375661 STIM1Q13586 685 aa13□□□□□ -0.33
LSM2-208ENST00000375661 NFE2Q16621 373 aaPredicted RBP13□□□□□ -0.33
LSM2-208ENST00000375661 SKOR2Q2VWA4 1001 aaPredicted RBP13□□□□□ -0.33
LSM2-208ENST00000375661 DPCR1Q3MIW9 517 aa13□□□□□ -0.33
LSM2-208ENST00000375661 SV2CQ496J9 727 aa13□□□□□ -0.33
LSM2-208ENST00000375661 DAB2IPQ5VWQ8 1189 aa13□□□□□ -0.33
LSM2-208ENST00000375661 TRIM68Q6AZZ1 485 aa13□□□□□ -0.33
LSM2-208ENST00000375661 PSAPL1Q6NUJ1 521 aa13□□□□□ -0.33
LSM2-208ENST00000375661 LRRTM3Q86VH5 581 aa13□□□□□ -0.33
LSM2-208ENST00000375661 BRSK2Q8IWQ3 736 aa13□□□□□ -0.33
LSM2-208ENST00000375661 RPLP0P6Q8NHW5 317 aa13□□□□□ -0.33
LSM2-208ENST00000375661 NELFBQ8WX92 580 aa13□□□□□ -0.33
LSM2-208ENST00000375661 ATP2A3Q93084 1043 aa13□□□□□ -0.33
LSM2-208ENST00000375661 ZNF560Q96MR9 790 aa13□□□□□ -0.33
LSM2-208ENST00000375661 HHIPQ96QV1 700 aa13□□□□□ -0.33
LSM2-208ENST00000375661 MED15Q96RN5 788 aa13□□□□□ -0.33
LSM2-208ENST00000375661 ECT2Q9H8V3 914 aa13□□□□□ -0.33
LSM2-208ENST00000375661 DPP3Q9NY33 737 aa13□□□□□ -0.33
LSM2-208ENST00000375661 ABI2Q9NYB9 513 aaPredicted RBP13□□□□□ -0.33
LSM2-208ENST00000375661 ZFHX4Q86UP3 3567 aa13□□□□□ -0.33
LSM2-208ENST00000375661 ZNF233A6NK53 670 aa12.99□□□□□ -0.33
LSM2-208ENST00000375661 KPNA7A9QM74 516 aa12.99□□□□□ -0.33
LSM2-208ENST00000375661 PSMA7O14818 248 aa12.99□□□□□ -0.33
LSM2-208ENST00000375661 EXOC3O60645 756 aa12.99□□□□□ -0.33
LSM2-208ENST00000375661 ARSAP15289 507 aa12.99□□□□□ -0.33
LSM2-208ENST00000375661 CASP4P49662 377 aa12.99□□□□□ -0.33
LSM2-208ENST00000375661 NOVA1P51513 510 aaKnown RBP12.99□□□□□ -0.33
LSM2-208ENST00000375661 STX17P56962 302 aa12.99□□□□□ -0.33
LSM2-208ENST00000375661 RPL10AP62906 217 aaKnown RBP12.99□□□□□ -0.33
LSM2-208ENST00000375661 TSPY1Q01534 308 aa12.99□□□□□ -0.33
LSM2-208ENST00000375661 CREB5Q02930 508 aa12.99□□□□□ -0.33
LSM2-208ENST00000375661 ADAM9Q13443 819 aa12.99□□□□□ -0.33
LSM2-208ENST00000375661 DMC1Q14565 340 aa12.99□□□□□ -0.33
LSM2-208ENST00000375661 MTF1Q14872 753 aa12.99□□□□□ -0.33
LSM2-208ENST00000375661 EDRF1Q3B7T1 1238 aa12.99□□□□□ -0.33
LSM2-208ENST00000375661 WSCD1Q658N2 575 aa12.99□□□□□ -0.33
LSM2-208ENST00000375661 TXNDC8Q6A555 127 aa12.99□□□□□ -0.33
LSM2-208ENST00000375661 KLHL10Q6JEL2 608 aa12.99□□□□□ -0.33
LSM2-208ENST00000375661 TTI2Q6NXR4 508 aa12.99□□□□□ -0.33
LSM2-208ENST00000375661 ZC3H3Q8IXZ2 948 aaKnown RBP12.99□□□□□ -0.33
LSM2-208ENST00000375661 MLKLQ8NB16 471 aa12.99□□□□□ -0.33
LSM2-208ENST00000375661 RDH13Q8NBN7 331 aa12.99□□□□□ -0.33
LSM2-208ENST00000375661 NOC3LQ8WTT2 800 aaKnown RBP12.99□□□□□ -0.33
LSM2-208ENST00000375661 OSCP1Q8WVF1 389 aa12.99□□□□□ -0.33
LSM2-208ENST00000375661 CD101Q93033 1021 aa12.99□□□□□ -0.33
LSM2-208ENST00000375661 TRMT2BQ96GJ1 504 aaKnown RBP12.99□□□□□ -0.33
LSM2-208ENST00000375661 MYRFLQ96LU7 910 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms