RNA–Protein interactions for RNA: ENST00000374843.8

HLA-DMA-201, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DMA, Length 1,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-201ENST00000374843 BEST1O76090 585 aa18.16■□□□□ 0.5
HLA-DMA-201ENST00000374843 ARHGEF15O94989 841 aa18.16■□□□□ 0.5
HLA-DMA-201ENST00000374843 RB1P06400 928 aa18.16■□□□□ 0.5
HLA-DMA-201ENST00000374843 RGS19P49795 217 aa18.16■□□□□ 0.5
HLA-DMA-201ENST00000374843 UBE3AQ05086 875 aa18.16■□□□□ 0.5
HLA-DMA-201ENST00000374843 MAMLD1Q13495 774 aa18.16■□□□□ 0.5
HLA-DMA-201ENST00000374843 ZNF268Q14587 947 aaPredicted RBP18.16■□□□□ 0.5
HLA-DMA-201ENST00000374843 RAB41Q5JT25 222 aa18.16■□□□□ 0.5
HLA-DMA-201ENST00000374843 CYP4A22Q5TCH4 519 aa18.16■□□□□ 0.5
HLA-DMA-201ENST00000374843 DNAJC24Q6P3W2 148 aa18.16■□□□□ 0.5
HLA-DMA-201ENST00000374843 VSTM1Q6UX27 236 aa18.16■□□□□ 0.5
HLA-DMA-201ENST00000374843 ZDHHC17Q8IUH5 632 aa18.16■□□□□ 0.5
HLA-DMA-201ENST00000374843 LRRC57Q8N9N7 239 aa18.16■□□□□ 0.5
HLA-DMA-201ENST00000374843 FBXO22Q8NEZ5 403 aa18.16■□□□□ 0.5
HLA-DMA-201ENST00000374843 TRIM58Q8NG06 486 aa18.16■□□□□ 0.5
HLA-DMA-201ENST00000374843 TPCN2Q8NHX9 752 aa18.16■□□□□ 0.5
HLA-DMA-201ENST00000374843 ZNF564Q8TBZ8 553 aaPredicted RBP18.16■□□□□ 0.5
HLA-DMA-201ENST00000374843 SPPL2BQ8TCT7 592 aa18.16■□□□□ 0.5
HLA-DMA-201ENST00000374843 NUP85Q9BW27 656 aa18.16■□□□□ 0.5
HLA-DMA-201ENST00000374843 RHOBTB2Q9BYZ6 727 aa18.16■□□□□ 0.5
HLA-DMA-201ENST00000374843 IRX2Q9BZI1 471 aaPredicted RBP18.16■□□□□ 0.5
HLA-DMA-201ENST00000374843 SYNCQ9H7C4 482 aa18.16■□□□□ 0.5
HLA-DMA-201ENST00000374843 RXFP1Q9HBX9 757 aa18.16■□□□□ 0.5
HLA-DMA-201ENST00000374843 MRPL47Q9HD33 250 aaKnown RBP18.16■□□□□ 0.5
HLA-DMA-201ENST00000374843 PARVAQ9NVD7 372 aa18.16■□□□□ 0.5
HLA-DMA-201ENST00000374843 FNIP2Q9P278 1114 aa18.16■□□□□ 0.5
HLA-DMA-201ENST00000374843 CTTNBP2NLQ9P2B4 639 aa18.16■□□□□ 0.5
HLA-DMA-201ENST00000374843 SSX2IPQ9Y2D8 614 aa18.16■□□□□ 0.5
HLA-DMA-201ENST00000374843 PAXBP1Q9Y5B6 917 aa18.16■□□□□ 0.5
HLA-DMA-201ENST00000374843 PCDHB5Q9Y5E4 795 aa18.16■□□□□ 0.5
HLA-DMA-201ENST00000374843 CDY1Q9Y6F8 540 aa18.16■□□□□ 0.5
HLA-DMA-201ENST00000374843 PLXNA4Q9HCM2 1894 aa18.16■□□□□ 0.5
HLA-DMA-201ENST00000374843 COL4A4P53420 1690 aaPredicted RBP18.15■□□□□ 0.5
HLA-DMA-201ENST00000374843 FAM170AA1A519 330 aa18.15■□□□□ 0.5
HLA-DMA-201ENST00000374843 GRID2IPA4D2P6 1211 aa18.15■□□□□ 0.5
HLA-DMA-201ENST00000374843 GRXCR1A8MXD5 290 aa18.15■□□□□ 0.5
HLA-DMA-201ENST00000374843 ADAM12O43184 909 aa18.15■□□□□ 0.5
HLA-DMA-201ENST00000374843 MOCS3O95396 460 aa18.15■□□□□ 0.5
HLA-DMA-201ENST00000374843 VNN2O95498 520 aa18.15■□□□□ 0.5
HLA-DMA-201ENST00000374843 CPB1P15086 417 aa18.15■□□□□ 0.5
HLA-DMA-201ENST00000374843 BDNFP23560 247 aa18.15■□□□□ 0.5
HLA-DMA-201ENST00000374843 RGS7P49802 495 aa18.15■□□□□ 0.5
HLA-DMA-201ENST00000374843 ROR1Q01973 937 aa18.15■□□□□ 0.5
HLA-DMA-201ENST00000374843 TAP1Q03518 808 aa18.15■□□□□ 0.5
HLA-DMA-201ENST00000374843 C2CD6Q53TS8 623 aa18.15■□□□□ 0.5
HLA-DMA-201ENST00000374843 C11orf63Q6NUN7 778 aa18.15■□□□□ 0.5
HLA-DMA-201ENST00000374843 LLGL2Q6P1M3 1020 aa18.15■□□□□ 0.5
HLA-DMA-201ENST00000374843 OLFML1Q6UWY5 402 aa18.15■□□□□ 0.5
HLA-DMA-201ENST00000374843 ALS2CR12Q96Q35 445 aa18.15■□□□□ 0.5
HLA-DMA-201ENST00000374843 CLSTN3Q9BQT9 956 aa18.15■□□□□ 0.5
HLA-DMA-201ENST00000374843 OSGEPQ9NPF4 335 aa18.15■□□□□ 0.5
HLA-DMA-201ENST00000374843 HSFX1Q9UBD0 423 aa18.15■□□□□ 0.5
HLA-DMA-201ENST00000374843 CHD9Q3L8U1 2897 aa18.14■□□□□ 0.49
HLA-DMA-201ENST00000374843 WDR27A2RRH5 827 aa18.14■□□□□ 0.49
HLA-DMA-201ENST00000374843 PAPSS1O43252 624 aaPredicted RBP18.14■□□□□ 0.49
HLA-DMA-201ENST00000374843 BUB1O43683 1085 aa18.14■□□□□ 0.49
HLA-DMA-201ENST00000374843 CA3P07451 260 aa18.14■□□□□ 0.49
HLA-DMA-201ENST00000374843 MYOGP15173 224 aa18.14■□□□□ 0.49
HLA-DMA-201ENST00000374843 MAP3K7CLP57077 242 aa18.14■□□□□ 0.49
HLA-DMA-201ENST00000374843 ERVK-21P61565 698 aa18.14■□□□□ 0.49
HLA-DMA-201ENST00000374843 GNG11P61952 73 aa18.14■□□□□ 0.49
HLA-DMA-201ENST00000374843 ADCY1Q08828 1119 aa18.14■□□□□ 0.49
HLA-DMA-201ENST00000374843 RAB33AQ14088 237 aa18.14■□□□□ 0.49
HLA-DMA-201ENST00000374843 TPGS2Q68CL5 300 aa18.14■□□□□ 0.49
HLA-DMA-201ENST00000374843 FAM183BPQ6ZVS7 135 aa18.14■□□□□ 0.49
HLA-DMA-201ENST00000374843 SLFN11Q7Z7L1 901 aa18.14■□□□□ 0.49
HLA-DMA-201ENST00000374843 SCML4Q8N228 414 aa18.14■□□□□ 0.49
HLA-DMA-201ENST00000374843 C8orf48Q96LL4 319 aa18.14■□□□□ 0.49
HLA-DMA-201ENST00000374843 C17orf80Q9BSJ5 609 aa18.14■□□□□ 0.49
HLA-DMA-201ENST00000374843 C11orf84Q9BUA3 381 aaPredicted RBP18.14■□□□□ 0.49
HLA-DMA-201ENST00000374843 ST7Q9NRC1 585 aa18.14■□□□□ 0.49
HLA-DMA-201ENST00000374843 MRPL17Q9NRX2 175 aaKnown RBP18.14■□□□□ 0.49
HLA-DMA-201ENST00000374843 ABI2Q9NYB9 513 aaPredicted RBP18.14■□□□□ 0.49
HLA-DMA-201ENST00000374843 LCMT1Q9UIC8 334 aa18.14■□□□□ 0.49
HLA-DMA-201ENST00000374843 MAFFQ9ULX9 164 aa18.14■□□□□ 0.49
HLA-DMA-201ENST00000374843 YBX2Q9Y2T7 364 aaKnown RBP18.14■□□□□ 0.49
HLA-DMA-201ENST00000374843 IRAK3Q9Y616 596 aa18.14■□□□□ 0.49
HLA-DMA-201ENST00000374843 CEP290O15078 2479 aa18.14■□□□□ 0.49
HLA-DMA-201ENST00000374843 SIGLEC16A6NMB1 481 aa18.13■□□□□ 0.49
HLA-DMA-201ENST00000374843 TRIM66O15016 1216 aa18.13■□□□□ 0.49
HLA-DMA-201ENST00000374843 FANCGO15287 622 aa18.13■□□□□ 0.49
HLA-DMA-201ENST00000374843 ABLIM3O94929 683 aa18.13■□□□□ 0.49
HLA-DMA-201ENST00000374843 FBXO21O94952 628 aa18.13■□□□□ 0.49
HLA-DMA-201ENST00000374843 CYP2F1P24903 491 aa18.13■□□□□ 0.49
HLA-DMA-201ENST00000374843 NOP2P46087 812 aaKnown RBP18.13■□□□□ 0.49
HLA-DMA-201ENST00000374843 RAB30Q15771 203 aa18.13■□□□□ 0.49
HLA-DMA-201ENST00000374843 ZNF569Q5MCW4 686 aa18.13■□□□□ 0.49
HLA-DMA-201ENST00000374843 RNF19BQ6ZMZ0 732 aa18.13■□□□□ 0.49
HLA-DMA-201ENST00000374843 ARCQ7LC44 396 aa18.13■□□□□ 0.49
HLA-DMA-201ENST00000374843 SLC35F6Q8N357 371 aa18.13■□□□□ 0.49
HLA-DMA-201ENST00000374843 FNIP1Q8TF40 1166 aa18.13■□□□□ 0.49
HLA-DMA-201ENST00000374843 CEP295NLQ96MC4 621 aa18.13■□□□□ 0.49
HLA-DMA-201ENST00000374843 TGS1Q96RS0 853 aaKnown RBP18.13■□□□□ 0.49
HLA-DMA-201ENST00000374843 WDR24Q96S15 920 aa18.13■□□□□ 0.49
HLA-DMA-201ENST00000374843 KCNK16Q96T55 309 aa18.13■□□□□ 0.49
HLA-DMA-201ENST00000374843 AFF4Q9UHB7 1163 aaKnown RBP18.13■□□□□ 0.49
HLA-DMA-201ENST00000374843 CHORDC1Q9UHD1 332 aaPredicted RBP18.13■□□□□ 0.49
HLA-DMA-201ENST00000374843 TNRC18O15417 2968 aaPredicted RBP18.12■□□□□ 0.49
HLA-DMA-201ENST00000374843 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.12■□□□□ 0.49
HLA-DMA-201ENST00000374843 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms