RNA–Protein interactions for RNA: ENST00000374541.3

PTPN3-202, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPN3, Length 6,703 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-202ENST00000374541 DDHD1Q8NEL9 900 aa6.55□□□□□ -1.36
PTPN3-202ENST00000374541 SPATA18Q8TC71 538 aa6.55□□□□□ -1.36
PTPN3-202ENST00000374541 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.55□□□□□ -1.36
PTPN3-202ENST00000374541 PPP1R13LQ8WUF5 828 aa6.55□□□□□ -1.36
PTPN3-202ENST00000374541 PLEKHA8Q96JA3 519 aa6.55□□□□□ -1.36
PTPN3-202ENST00000374541 MUC3BQ9H195 1237 aa6.55□□□□□ -1.36
PTPN3-202ENST00000374541 CASS4Q9NQ75 786 aa6.55□□□□□ -1.36
PTPN3-202ENST00000374541 ZSCAN32Q9NX65 697 aa6.55□□□□□ -1.36
PTPN3-202ENST00000374541 WBP1LQ9NX94 342 aa6.55□□□□□ -1.36
PTPN3-202ENST00000374541 HACD3Q9P035 362 aa6.55□□□□□ -1.36
PTPN3-202ENST00000374541 ADAMTS1Q9UHI8 967 aa6.55□□□□□ -1.36
PTPN3-202ENST00000374541 CDY2AQ9Y6F7 541 aa6.55□□□□□ -1.36
PTPN3-202ENST00000374541 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.55□□□□□ -1.36
PTPN3-202ENST00000374541 ORC4O43929 436 aa6.54□□□□□ -1.36
PTPN3-202ENST00000374541 CDH16O75309 829 aa6.54□□□□□ -1.36
PTPN3-202ENST00000374541 CTSEP14091 401 aa6.54□□□□□ -1.36
PTPN3-202ENST00000374541 PLCG1P19174 1290 aa6.54□□□□□ -1.36
PTPN3-202ENST00000374541 TYK2P29597 1187 aa6.54□□□□□ -1.36
PTPN3-202ENST00000374541 MAPK9P45984 424 aa6.54□□□□□ -1.36
PTPN3-202ENST00000374541 FOXO4P98177 505 aa6.54□□□□□ -1.36
PTPN3-202ENST00000374541 CSTF3Q12996 717 aaKnown RBP6.54□□□□□ -1.36
PTPN3-202ENST00000374541 KPNB1Q14974 876 aaKnown RBP6.54□□□□□ -1.36
PTPN3-202ENST00000374541 STILQ15468 1287 aa6.54□□□□□ -1.36
PTPN3-202ENST00000374541 ANKLE1Q8NAG6 615 aa6.54□□□□□ -1.36
PTPN3-202ENST00000374541 XXYLT1Q8NBI6 393 aa6.54□□□□□ -1.36
PTPN3-202ENST00000374541 RFFLQ8WZ73 363 aa6.54□□□□□ -1.36
PTPN3-202ENST00000374541 TMEM143Q96AN5 459 aa6.54□□□□□ -1.36
PTPN3-202ENST00000374541 TNIP3Q96KP6 325 aa6.54□□□□□ -1.36
PTPN3-202ENST00000374541 EGFL8Q99944 293 aa6.54□□□□□ -1.36
PTPN3-202ENST00000374541 ROPN1BQ9BZX4 212 aaPredicted RBP6.54□□□□□ -1.36
PTPN3-202ENST00000374541 ROPN1Q9HAT0 212 aaPredicted RBP6.54□□□□□ -1.36
PTPN3-202ENST00000374541 CLCA2Q9UQC9 943 aa6.54□□□□□ -1.36
PTPN3-202ENST00000374541 ASTN2O75129 1339 aaPredicted RBP6.54□□□□□ -1.36
PTPN3-202ENST00000374541 MDH1P40925 334 aaKnown RBP6.54□□□□□ -1.36
PTPN3-202ENST00000374541 DGKEP52429 567 aa6.54□□□□□ -1.36
PTPN3-202ENST00000374541 PUS10Q3MIT2 529 aaKnown RBP6.54□□□□□ -1.36
PTPN3-202ENST00000374541 ACBD5Q5T8D3 534 aaPredicted RBP6.54□□□□□ -1.36
PTPN3-202ENST00000374541 ZNF564Q8TBZ8 553 aaPredicted RBP6.54□□□□□ -1.36
PTPN3-202ENST00000374541 KCNV2Q8TDN2 545 aa6.54□□□□□ -1.36
PTPN3-202ENST00000374541 ZNF576Q9H609 170 aa6.54□□□□□ -1.36
PTPN3-202ENST00000374541 ZWILCHQ9H900 591 aa6.54□□□□□ -1.36
PTPN3-202ENST00000374541 NGRNQ9NPE2 291 aaKnown RBP6.54□□□□□ -1.36
PTPN3-202ENST00000374541 TUBGCP4Q9UGJ1 667 aa6.54□□□□□ -1.36
PTPN3-202ENST00000374541 TMX2Q9Y320 296 aa6.54□□□□□ -1.36
PTPN3-202ENST00000374541 USP15Q9Y4E8 981 aaPredicted RBP6.54□□□□□ -1.36
PTPN3-202ENST00000374541 TMEM191CA6NGB0 347 aa6.54□□□□□ -1.36
PTPN3-202ENST00000374541 SLC9A3R1O14745 358 aaPredicted RBP6.54□□□□□ -1.36
PTPN3-202ENST00000374541 SLC7A5Q01650 507 aa6.54□□□□□ -1.36
PTPN3-202ENST00000374541 PDIA2Q13087 525 aaKnown RBP6.54□□□□□ -1.36
PTPN3-202ENST00000374541 EIF2B5Q13144 721 aaKnown RBP6.54□□□□□ -1.36
PTPN3-202ENST00000374541 SGCGQ13326 291 aa6.54□□□□□ -1.36
PTPN3-202ENST00000374541 SV2CQ496J9 727 aa6.54□□□□□ -1.36
PTPN3-202ENST00000374541 EME1Q96AY2 570 aa6.54□□□□□ -1.36
PTPN3-202ENST00000374541 ZFYVE19Q96K21 471 aa6.54□□□□□ -1.36
PTPN3-202ENST00000374541 FOPNLQ96NB1 174 aa6.54□□□□□ -1.36
PTPN3-202ENST00000374541 KLHL31Q9H511 634 aa6.54□□□□□ -1.36
PTPN3-202ENST00000374541 ABHD14A-ACY1A0A1B0GW23 586 aa6.54□□□□□ -1.36
PTPN3-202ENST00000374541 CASTOR2A6NHX0 329 aa6.54□□□□□ -1.36
PTPN3-202ENST00000374541 ADORA2BP29275 332 aa6.54□□□□□ -1.36
PTPN3-202ENST00000374541 ACTN3Q08043 901 aaPredicted RBP6.54□□□□□ -1.36
PTPN3-202ENST00000374541 CDH18Q13634 790 aa6.54□□□□□ -1.36
PTPN3-202ENST00000374541 LRRC41Q15345 812 aa6.54□□□□□ -1.36
PTPN3-202ENST00000374541 FNDC3BQ53EP0 1204 aaKnown RBP6.54□□□□□ -1.36
PTPN3-202ENST00000374541 C10orf120Q5SQS8 335 aa6.54□□□□□ -1.36
PTPN3-202ENST00000374541 CNKSR3Q6P9H4 555 aa6.54□□□□□ -1.36
PTPN3-202ENST00000374541 CPA6Q8N4T0 437 aa6.54□□□□□ -1.36
PTPN3-202ENST00000374541 HSPH1Q92598 858 aa6.54□□□□□ -1.36
PTPN3-202ENST00000374541 THOC1Q96FV9 657 aaKnown RBP6.54□□□□□ -1.36
PTPN3-202ENST00000374541 UXTQ9UBK9 157 aaPredicted RBP6.54□□□□□ -1.36
PTPN3-202ENST00000374541 KANSL1LA0AUZ9 987 aa6.54□□□□□ -1.36
PTPN3-202ENST00000374541 MAGEA13PA6NCF6 341 aa6.54□□□□□ -1.36
PTPN3-202ENST00000374541 NMT2O60551 498 aa6.54□□□□□ -1.36
PTPN3-202ENST00000374541 SERPINB3P29508 390 aa6.54□□□□□ -1.36
PTPN3-202ENST00000374541 PRAMEP78395 509 aa6.54□□□□□ -1.36
PTPN3-202ENST00000374541 TRIM16LQ309B1 348 aa6.54□□□□□ -1.36
PTPN3-202ENST00000374541 TXNRD3Q86VQ6 643 aa6.54□□□□□ -1.36
PTPN3-202ENST00000374541 PIGOQ8TEQ8 1089 aa6.54□□□□□ -1.36
PTPN3-202ENST00000374541 SH3KBP1Q96B97 665 aa6.54□□□□□ -1.36
PTPN3-202ENST00000374541 OMDQ99983 421 aa6.54□□□□□ -1.36
PTPN3-202ENST00000374541 H2AFY2Q9P0M6 372 aaPredicted RBP6.54□□□□□ -1.36
PTPN3-202ENST00000374541 MBD2Q9UBB5 411 aa6.54□□□□□ -1.36
PTPN3-202ENST00000374541 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.54□□□□□ -1.36
PTPN3-202ENST00000374541 ADAM30Q9UKF2 790 aa6.54□□□□□ -1.36
PTPN3-202ENST00000374541 LZTS1Q9Y250 596 aa6.54□□□□□ -1.36
PTPN3-202ENST00000374541 DLG5Q8TDM6 1919 aa6.54□□□□□ -1.36
PTPN3-202ENST00000374541 RFC5P40937 340 aa6.54□□□□□ -1.36
PTPN3-202ENST00000374541 MTHFRP42898 656 aa6.54□□□□□ -1.36
PTPN3-202ENST00000374541 CLK1P49759 484 aaKnown RBP6.54□□□□□ -1.36
PTPN3-202ENST00000374541 MRPS6P82932 125 aaKnown RBP6.54□□□□□ -1.36
PTPN3-202ENST00000374541 STX3Q13277 289 aa6.54□□□□□ -1.36
PTPN3-202ENST00000374541 NDUFA5Q16718 116 aa6.54□□□□□ -1.36
PTPN3-202ENST00000374541 AARS2Q5JTZ9 985 aaKnown RBP6.54□□□□□ -1.36
PTPN3-202ENST00000374541 SZRD1Q7Z422 152 aa6.54□□□□□ -1.36
PTPN3-202ENST00000374541 IFNLR1Q8IU57 520 aaPredicted RBP6.54□□□□□ -1.36
PTPN3-202ENST00000374541 B4GALNT2Q8NHY0 566 aa6.54□□□□□ -1.36
PTPN3-202ENST00000374541 CXorf56Q9H5V9 222 aa6.54□□□□□ -1.36
PTPN3-202ENST00000374541 ZCCHC17Q9NP64 241 aaKnown RBP6.54□□□□□ -1.36
PTPN3-202ENST00000374541 IL23AQ9NPF7 189 aa6.54□□□□□ -1.36
PTPN3-202ENST00000374541 FAM217BQ9NTX9 383 aaPredicted RBP6.54□□□□□ -1.36
PTPN3-202ENST00000374541 DCTN4Q9UJW0 460 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms