RNA–Protein interactions for RNA: ENST00000374399.8

NIPAL3-204, Transcript of NIPA like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPAL3, Length 1,711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-204ENST00000374399 FAM35AQ86V20 835 aa16.53■□□□□ 0.24
NIPAL3-204ENST00000374399 MMGT1Q8N4V1 131 aa16.53■□□□□ 0.24
NIPAL3-204ENST00000374399 UBL4BQ8N7F7 174 aa16.53■□□□□ 0.24
NIPAL3-204ENST00000374399 BCL7CQ8WUZ0 217 aaPredicted RBP16.53■□□□□ 0.24
NIPAL3-204ENST00000374399 MYLPFQ96A32 169 aa16.53■□□□□ 0.24
NIPAL3-204ENST00000374399 HSFY1Q96LI6 401 aa16.53■□□□□ 0.24
NIPAL3-204ENST00000374399 FAM193BQ96PV7 902 aaPredicted RBP16.53■□□□□ 0.24
NIPAL3-204ENST00000374399 RHOBTB2Q9BYZ6 727 aa16.53■□□□□ 0.24
NIPAL3-204ENST00000374399 GPR62Q9BZJ7 368 aa16.53■□□□□ 0.24
NIPAL3-204ENST00000374399 MCOLN1Q9GZU1 580 aa16.53■□□□□ 0.24
NIPAL3-204ENST00000374399 CYLDQ9NQC7 956 aa16.53■□□□□ 0.24
NIPAL3-204ENST00000374399 C2CD4BA6NLJ0 364 aa16.52■□□□□ 0.24
NIPAL3-204ENST00000374399 DGKIO75912 1065 aa16.52■□□□□ 0.24
NIPAL3-204ENST00000374399 OAZ2O95190 189 aa16.52■□□□□ 0.24
NIPAL3-204ENST00000374399 EFEMP2O95967 443 aa16.52■□□□□ 0.24
NIPAL3-204ENST00000374399 GALTP07902 379 aa16.52■□□□□ 0.24
NIPAL3-204ENST00000374399 EN2P19622 333 aaPredicted RBP16.52■□□□□ 0.24
NIPAL3-204ENST00000374399 FLT3P36888 993 aa16.52■□□□□ 0.24
NIPAL3-204ENST00000374399 PBX3P40426 434 aa16.52■□□□□ 0.24
NIPAL3-204ENST00000374399 PAFAH1B1P43034 410 aa16.52■□□□□ 0.24
NIPAL3-204ENST00000374399 SLC6A3Q01959 620 aa16.52■□□□□ 0.24
NIPAL3-204ENST00000374399 ADCY1Q08828 1119 aa16.52■□□□□ 0.24
NIPAL3-204ENST00000374399 PIGHQ14442 188 aaPredicted RBP16.52■□□□□ 0.24
NIPAL3-204ENST00000374399 TXNRD3NBQ6F5E7 133 aa16.52■□□□□ 0.24
NIPAL3-204ENST00000374399 ANKS1BQ7Z6G8 1248 aa16.52■□□□□ 0.24
NIPAL3-204ENST00000374399 METTL23Q86XA0 190 aa16.52■□□□□ 0.24
NIPAL3-204ENST00000374399 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.52■□□□□ 0.24
NIPAL3-204ENST00000374399 PRDM5Q9NQX1 630 aaPredicted RBP16.52■□□□□ 0.24
NIPAL3-204ENST00000374399 KRT82Q9NSB4 513 aa16.52■□□□□ 0.24
NIPAL3-204ENST00000374399 USTQ9Y2C2 406 aa16.52■□□□□ 0.24
NIPAL3-204ENST00000374399 PATJQ8NI35 1801 aa16.51■□□□□ 0.23
NIPAL3-204ENST00000374399 HHLA1C9JL84 531 aa16.51■□□□□ 0.23
NIPAL3-204ENST00000374399 PGRMC1O00264 195 aaKnown RBP16.51■□□□□ 0.23
NIPAL3-204ENST00000374399 UPP2O95045 317 aa16.51■□□□□ 0.23
NIPAL3-204ENST00000374399 CAPN2P17655 700 aa16.51■□□□□ 0.23
NIPAL3-204ENST00000374399 RWDD2BP57060 319 aa16.51■□□□□ 0.23
NIPAL3-204ENST00000374399 MRPL58Q14197 206 aaKnown RBP16.51■□□□□ 0.23
NIPAL3-204ENST00000374399 ATP13A4Q4VNC1 1196 aa16.51■□□□□ 0.23
NIPAL3-204ENST00000374399 RAB6CQ53S08 254 aa16.51■□□□□ 0.23
NIPAL3-204ENST00000374399 MFSD5Q6N075 450 aa16.51■□□□□ 0.23
NIPAL3-204ENST00000374399 CC2D1AQ6P1N0 951 aaPredicted RBP16.51■□□□□ 0.23
NIPAL3-204ENST00000374399 TMCO2Q7Z6W1 182 aaPredicted RBP16.51■□□□□ 0.23
NIPAL3-204ENST00000374399 KCTD13Q8WZ19 329 aa16.51■□□□□ 0.23
NIPAL3-204ENST00000374399 KCNK16Q96T55 309 aa16.51■□□□□ 0.23
NIPAL3-204ENST00000374399 TMEM175Q9BSA9 504 aa16.51■□□□□ 0.23
NIPAL3-204ENST00000374399 HERPUD2Q9BSE4 406 aa16.51■□□□□ 0.23
NIPAL3-204ENST00000374399 DNAI2Q9GZS0 605 aa16.51■□□□□ 0.23
NIPAL3-204ENST00000374399 RAB6CQ9H0N0 254 aa16.51■□□□□ 0.23
NIPAL3-204ENST00000374399 CWH43Q9H720 699 aa16.51■□□□□ 0.23
NIPAL3-204ENST00000374399 RC3H2Q9HBD1 1191 aaKnown RBP16.51■□□□□ 0.23
NIPAL3-204ENST00000374399 ADAM28Q9UKQ2 775 aa16.51■□□□□ 0.23
NIPAL3-204ENST00000374399 PSTPIP1O43586 416 aa16.5■□□□□ 0.23
NIPAL3-204ENST00000374399 LRCH4O75427 683 aa16.5■□□□□ 0.23
NIPAL3-204ENST00000374399 GRAP2O75791 330 aa16.5■□□□□ 0.23
NIPAL3-204ENST00000374399 CAPN15O75808 1086 aa16.5■□□□□ 0.23
NIPAL3-204ENST00000374399 FGGP02679 453 aa16.5■□□□□ 0.23
NIPAL3-204ENST00000374399 PSMA2P25787 234 aa16.5■□□□□ 0.23
NIPAL3-204ENST00000374399 BCAR1P56945 870 aa16.5■□□□□ 0.23
NIPAL3-204ENST00000374399 MAP3K7CLP57077 242 aa16.5■□□□□ 0.23
NIPAL3-204ENST00000374399 DEFB103AP81534 67 aa16.5■□□□□ 0.23
NIPAL3-204ENST00000374399 YWHAHQ04917 246 aaPredicted RBP16.5■□□□□ 0.23
NIPAL3-204ENST00000374399 SH3PXD2AQ5TCZ1 1133 aa16.5■□□□□ 0.23
NIPAL3-204ENST00000374399 GPRIN1Q7Z2K8 1008 aa16.5■□□□□ 0.23
NIPAL3-204ENST00000374399 TOP1MTQ969P6 601 aa16.5■□□□□ 0.23
NIPAL3-204ENST00000374399 PNKPQ96T60 521 aa16.5■□□□□ 0.23
NIPAL3-204ENST00000374399 MRPL9Q9BYD2 267 aaKnown RBP16.5■□□□□ 0.23
NIPAL3-204ENST00000374399 ADAM33Q9BZ11 813 aa16.5■□□□□ 0.23
NIPAL3-204ENST00000374399 MIS12Q9H081 205 aa16.5■□□□□ 0.23
NIPAL3-204ENST00000374399 CSNK1G1Q9HCP0 422 aa16.5■□□□□ 0.23
NIPAL3-204ENST00000374399 LCMT1Q9UIC8 334 aa16.5■□□□□ 0.23
NIPAL3-204ENST00000374399 LAMA2P24043 3122 aaKnown RBP16.5■□□□□ 0.23
NIPAL3-204ENST00000374399 ABHD14A-ACY1A0A1B0GW23 586 aa16.5■□□□□ 0.23
NIPAL3-204ENST00000374399 TCRBV7S2A1N4TA0A589 114 aa16.5■□□□□ 0.23
NIPAL3-204ENST00000374399 NT5C1B-RDH14C9J2C7 533 aa16.5■□□□□ 0.23
NIPAL3-204ENST00000374399 TADA2AO75478 443 aa16.5■□□□□ 0.23
NIPAL3-204ENST00000374399 ALDH2P05091 517 aa16.5■□□□□ 0.23
NIPAL3-204ENST00000374399 FAM200BP0CF97 657 aa16.5■□□□□ 0.23
NIPAL3-204ENST00000374399 LCP1P13796 627 aa16.5■□□□□ 0.23
NIPAL3-204ENST00000374399 IL1R2P27930 398 aa16.5■□□□□ 0.23
NIPAL3-204ENST00000374399 NDUFV1P49821 464 aa16.5■□□□□ 0.23
NIPAL3-204ENST00000374399 ZNF143P52747 638 aaPredicted RBP16.5■□□□□ 0.23
NIPAL3-204ENST00000374399 SLC25A11Q02978 314 aaKnown RBP16.5■□□□□ 0.23
NIPAL3-204ENST00000374399 C16orf59Q7L2K0 433 aa16.5■□□□□ 0.23
NIPAL3-204ENST00000374399 ZDHHC17Q8IUH5 632 aa16.5■□□□□ 0.23
NIPAL3-204ENST00000374399 RHOT1Q8IXI2 618 aa16.5■□□□□ 0.23
NIPAL3-204ENST00000374399 LRRC43Q8N309 656 aa16.5■□□□□ 0.23
NIPAL3-204ENST00000374399 GPR161Q8N6U8 529 aaKnown RBP16.5■□□□□ 0.23
NIPAL3-204ENST00000374399 RXFP2Q8WXD0 754 aa16.5■□□□□ 0.23
NIPAL3-204ENST00000374399 NDRG1Q92597 394 aaKnown RBP16.5■□□□□ 0.23
NIPAL3-204ENST00000374399 ZNF689Q96CS4 500 aaPredicted RBP16.5■□□□□ 0.23
NIPAL3-204ENST00000374399 B3GALT6Q96L58 329 aa16.5■□□□□ 0.23
NIPAL3-204ENST00000374399 MED10Q9BTT4 135 aa16.5■□□□□ 0.23
NIPAL3-204ENST00000374399 AP1M1Q9BXS5 423 aa16.5■□□□□ 0.23
NIPAL3-204ENST00000374399 FAN1Q9Y2M0 1017 aa16.5■□□□□ 0.23
NIPAL3-204ENST00000374399 COL4A4P53420 1690 aaPredicted RBP16.49■□□□□ 0.23
NIPAL3-204ENST00000374399 DPYSL4O14531 572 aa16.49■□□□□ 0.23
NIPAL3-204ENST00000374399 SYN3O14994 580 aa16.49■□□□□ 0.23
NIPAL3-204ENST00000374399 AP1G2O75843 785 aa16.49■□□□□ 0.23
NIPAL3-204ENST00000374399 OR4Q2P0C623 313 aa16.49■□□□□ 0.23
NIPAL3-204ENST00000374399 RHOXF2BP0C7M4 288 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms