RNA–Protein interactions for RNA: ENST00000372216.8

COL4A6-202, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-202ENST00000372216 MIB1Q86YT6 1006 aa10.17□□□□□ -0.78
COL4A6-202ENST00000372216 ZFPM1Q8IX07 1006 aa10.17□□□□□ -0.78
COL4A6-202ENST00000372216 RIN3Q8TB24 985 aa10.17□□□□□ -0.78
COL4A6-202ENST00000372216 COG1Q8WTW3 980 aa10.17□□□□□ -0.78
COL4A6-202ENST00000372216 TFB1MQ8WVM0 346 aaKnown RBP10.17□□□□□ -0.78
COL4A6-202ENST00000372216 AHCYL2Q96HN2 611 aaKnown RBP10.17□□□□□ -0.78
COL4A6-202ENST00000372216 PAK5Q9P286 719 aa10.17□□□□□ -0.78
COL4A6-202ENST00000372216 A8MX80 341 aa10.17□□□□□ -0.78
COL4A6-202ENST00000372216 ARFIP2P53365 341 aa10.17□□□□□ -0.78
COL4A6-202ENST00000372216 OAZ1P54368 228 aa10.17□□□□□ -0.78
COL4A6-202ENST00000372216 CCDC15Q0P6D6 951 aa10.17□□□□□ -0.78
COL4A6-202ENST00000372216 ACVR2BQ13705 512 aa10.17□□□□□ -0.78
COL4A6-202ENST00000372216 STAT4Q14765 748 aa10.17□□□□□ -0.78
COL4A6-202ENST00000372216 RPRD1AQ96P16 312 aaPredicted RBP10.17□□□□□ -0.78
COL4A6-202ENST00000372216 CBWD1Q9BRT8 395 aa10.17□□□□□ -0.78
COL4A6-202ENST00000372216 LRRC1Q9BTT6 524 aa10.17□□□□□ -0.78
COL4A6-202ENST00000372216 NEU2Q9Y3R4 380 aa10.17□□□□□ -0.78
COL4A6-202ENST00000372216 PCDHGA4Q9Y5G9 962 aa10.17□□□□□ -0.78
COL4A6-202ENST00000372216 ALDH2P05091 517 aa10.17□□□□□ -0.78
COL4A6-202ENST00000372216 PON1P27169 355 aa10.17□□□□□ -0.78
COL4A6-202ENST00000372216 TRIM60Q495X7 471 aa10.17□□□□□ -0.78
COL4A6-202ENST00000372216 NOL9Q5SY16 702 aaKnown RBP10.17□□□□□ -0.78
COL4A6-202ENST00000372216 ZMAT2Q96NC0 199 aaKnown RBP10.17□□□□□ -0.78
COL4A6-202ENST00000372216 WDR24Q96S15 920 aa10.17□□□□□ -0.78
COL4A6-202ENST00000372216 OSBPL8Q9BZF1 889 aa10.17□□□□□ -0.78
COL4A6-202ENST00000372216 STN1Q9H668 368 aaKnown RBP10.17□□□□□ -0.78
COL4A6-202ENST00000372216 ACTR5Q9H9F9 607 aaPredicted RBP10.17□□□□□ -0.78
COL4A6-202ENST00000372216 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.17□□□□□ -0.78
COL4A6-202ENST00000372216 MYPNQ86TC9 1320 aa10.17□□□□□ -0.78
COL4A6-202ENST00000372216 CST8O60676 142 aa10.17□□□□□ -0.78
COL4A6-202ENST00000372216 AMHP03971 560 aa10.17□□□□□ -0.78
COL4A6-202ENST00000372216 RAG1P15918 1043 aa10.17□□□□□ -0.78
COL4A6-202ENST00000372216 GARTP22102 1010 aa10.17□□□□□ -0.78
COL4A6-202ENST00000372216 EPHB2P29323 1055 aa10.17□□□□□ -0.78
COL4A6-202ENST00000372216 LHX1P48742 406 aa10.17□□□□□ -0.78
COL4A6-202ENST00000372216 RABGAP1LQ5R372 815 aa10.17□□□□□ -0.78
COL4A6-202ENST00000372216 E4F1Q66K89 784 aaPredicted RBP10.17□□□□□ -0.78
COL4A6-202ENST00000372216 BTNL9Q6UXG8 535 aa10.17□□□□□ -0.78
COL4A6-202ENST00000372216 IFNEQ86WN2 208 aa10.17□□□□□ -0.78
COL4A6-202ENST00000372216 COMMD2Q86X83 199 aa10.17□□□□□ -0.78
COL4A6-202ENST00000372216 WDR49Q8IV35 697 aa10.17□□□□□ -0.78
COL4A6-202ENST00000372216 RGL4Q8IZJ4 473 aa10.17□□□□□ -0.78
COL4A6-202ENST00000372216 RPL10AP62906 217 aaKnown RBP10.17□□□□□ -0.78
COL4A6-202ENST00000372216 PPIL2Q13356 520 aa10.17□□□□□ -0.78
COL4A6-202ENST00000372216 ZNF280DQ6N043 979 aa10.17□□□□□ -0.78
COL4A6-202ENST00000372216 FAM71DQ8N9W8 422 aa10.17□□□□□ -0.78
COL4A6-202ENST00000372216 OR9Q1Q8NGQ5 310 aa10.17□□□□□ -0.78
COL4A6-202ENST00000372216 ATP8B4Q8TF62 1192 aa10.17□□□□□ -0.78
COL4A6-202ENST00000372216 CIPCQ9C0C6 399 aa10.17□□□□□ -0.78
COL4A6-202ENST00000372216 EPC1Q9H2F5 836 aa10.17□□□□□ -0.78
COL4A6-202ENST00000372216 HMX1Q9NP08 348 aaPredicted RBP10.17□□□□□ -0.78
COL4A6-202ENST00000372216 DBR1Q9UK59 544 aaKnown RBP10.17□□□□□ -0.78
COL4A6-202ENST00000372216 HAUS5O94927 633 aa10.17□□□□□ -0.78
COL4A6-202ENST00000372216 ASS1P00966 412 aaKnown RBP10.17□□□□□ -0.78
COL4A6-202ENST00000372216 PYGBP11216 843 aa10.17□□□□□ -0.78
COL4A6-202ENST00000372216 TNNI3P19429 210 aa10.17□□□□□ -0.78
COL4A6-202ENST00000372216 PSEN2P49810 448 aa10.17□□□□□ -0.78
COL4A6-202ENST00000372216 CLEC17AQ6ZS10 378 aa10.17□□□□□ -0.78
COL4A6-202ENST00000372216 CXCL8P10145 99 aa10.16□□□□□ -0.78
COL4A6-202ENST00000372216 NME5P56597 212 aa10.16□□□□□ -0.78
COL4A6-202ENST00000372216 CYP24A1Q07973 514 aa10.16□□□□□ -0.78
COL4A6-202ENST00000372216 EFEMP1Q12805 493 aa10.16□□□□□ -0.78
COL4A6-202ENST00000372216 FSCN1Q16658 493 aaKnown RBP10.16□□□□□ -0.78
COL4A6-202ENST00000372216 HSP90AA5PQ58FG0 334 aa10.16□□□□□ -0.78
COL4A6-202ENST00000372216 DOK6Q6PKX4 331 aa10.16□□□□□ -0.78
COL4A6-202ENST00000372216 ICA1LQ8NDH6 482 aa10.16□□□□□ -0.78
COL4A6-202ENST00000372216 ARMC2Q8NEN0 867 aa10.16□□□□□ -0.78
COL4A6-202ENST00000372216 SPIRE2Q8WWL2 714 aa10.16□□□□□ -0.78
COL4A6-202ENST00000372216 PLEKHA8Q96JA3 519 aa10.16□□□□□ -0.78
COL4A6-202ENST00000372216 RBM15Q96T37 977 aaKnown RBP eCLIP10.16□□□□□ -0.78
COL4A6-202ENST00000372216 GIMAP4Q9NUV9 329 aa10.16□□□□□ -0.78
COL4A6-202ENST00000372216 TRPM5Q9NZQ8 1165 aa10.16□□□□□ -0.78
COL4A6-202ENST00000372216 DISP2A7MBM2 1401 aa10.16□□□□□ -0.78
COL4A6-202ENST00000372216 ITIH2P19823 946 aa10.16□□□□□ -0.78
COL4A6-202ENST00000372216 CASP7P55210 303 aa10.16□□□□□ -0.78
COL4A6-202ENST00000372216 POLD3Q15054 466 aaPredicted RBP10.16□□□□□ -0.78
COL4A6-202ENST00000372216 GRAMD4Q6IC98 578 aa10.16□□□□□ -0.78
COL4A6-202ENST00000372216 MRPL40Q9NQ50 206 aaKnown RBP10.16□□□□□ -0.78
COL4A6-202ENST00000372216 MARCOQ9UEW3 520 aaPredicted RBP10.16□□□□□ -0.78
COL4A6-202ENST00000372216 CHMP2BQ9UQN3 213 aa10.16□□□□□ -0.78
COL4A6-202ENST00000372216 TDRKHQ9Y2W6 561 aaKnown RBP10.16□□□□□ -0.78
COL4A6-202ENST00000372216 PRR23D1E9PI22 279 aaPredicted RBP10.16□□□□□ -0.78
COL4A6-202ENST00000372216 TSPAN3O60637 253 aa10.16□□□□□ -0.78
COL4A6-202ENST00000372216 CKMP06732 381 aa10.16□□□□□ -0.78
COL4A6-202ENST00000372216 CAPN1P07384 714 aa10.16□□□□□ -0.78
COL4A6-202ENST00000372216 PRR23D2P0DMB1 279 aaPredicted RBP10.16□□□□□ -0.78
COL4A6-202ENST00000372216 AKAP5P24588 427 aa10.16□□□□□ -0.78
COL4A6-202ENST00000372216 ADCYAP1R1P41586 468 aa10.16□□□□□ -0.78
COL4A6-202ENST00000372216 RAB27AP51159 221 aa10.16□□□□□ -0.78
COL4A6-202ENST00000372216 LRRC36Q1X8D7 754 aa10.16□□□□□ -0.78
COL4A6-202ENST00000372216 LAYNQ6UX15 382 aa10.16□□□□□ -0.78
COL4A6-202ENST00000372216 HERC6Q8IVU3 1022 aa10.16□□□□□ -0.78
COL4A6-202ENST00000372216 CAMKK1Q8N5S9 505 aa10.16□□□□□ -0.78
COL4A6-202ENST00000372216 CYGBQ8WWM9 190 aa10.16□□□□□ -0.78
COL4A6-202ENST00000372216 TRABDQ9H4I3 376 aa10.16□□□□□ -0.78
COL4A6-202ENST00000372216 LZTS1Q9Y250 596 aa10.16□□□□□ -0.78
COL4A6-202ENST00000372216 RRP15Q9Y3B9 282 aaKnown RBP10.16□□□□□ -0.78
COL4A6-202ENST00000372216 FOXP2O15409 715 aa10.16□□□□□ -0.78
COL4A6-202ENST00000372216 MAP3K6O95382 1288 aa10.16□□□□□ -0.78
COL4A6-202ENST00000372216 CHI3L1P36222 383 aaPredicted RBP10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms