RNA–Protein interactions for RNA: ENST00000370848.8

SS18L1-202, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best) BASIC

Gene SS18L1, Length 1,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-202ENST00000370848 GOLGA6L22H0YM25 854 aa16.17■□□□□ 0.18
SS18L1-202ENST00000370848 ASS1P00966 412 aaKnown RBP16.17■□□□□ 0.18
SS18L1-202ENST00000370848 LHX1P48742 406 aa16.17■□□□□ 0.18
SS18L1-202ENST00000370848 PLCB2Q00722 1185 aa16.17■□□□□ 0.18
SS18L1-202ENST00000370848 ENPEPQ07075 957 aa16.17■□□□□ 0.18
SS18L1-202ENST00000370848 DPCR1Q3MIW9 517 aa16.17■□□□□ 0.18
SS18L1-202ENST00000370848 MGAT5BQ3V5L5 792 aa16.17■□□□□ 0.18
SS18L1-202ENST00000370848 ZNF667Q5HYK9 610 aa16.17■□□□□ 0.18
SS18L1-202ENST00000370848 DPH6Q7L8W6 267 aa16.17■□□□□ 0.18
SS18L1-202ENST00000370848 DCP1BQ8IZD4 617 aaKnown RBP16.17■□□□□ 0.18
SS18L1-202ENST00000370848 SPEM1Q8N4L4 309 aa16.17■□□□□ 0.18
SS18L1-202ENST00000370848 STKLD1Q8NE28 680 aa16.17■□□□□ 0.18
SS18L1-202ENST00000370848 OR6B3Q8NGW1 331 aa16.17■□□□□ 0.18
SS18L1-202ENST00000370848 SPATA18Q8TC71 538 aa16.17■□□□□ 0.18
SS18L1-202ENST00000370848 CEP63Q96MT8 703 aa16.17■□□□□ 0.18
SS18L1-202ENST00000370848 TASP1Q9H6P5 420 aa16.17■□□□□ 0.18
SS18L1-202ENST00000370848 NDRG2Q9UN36 371 aaKnown RBP16.17■□□□□ 0.18
SS18L1-202ENST00000370848 BICDL2A1A5D9 508 aa16.16■□□□□ 0.18
SS18L1-202ENST00000370848 TACC1O75410 805 aa16.16■□□□□ 0.18
SS18L1-202ENST00000370848 PRAMEF12O95522 483 aa16.16■□□□□ 0.18
SS18L1-202ENST00000370848 HAPLN1P10915 354 aaPredicted RBP16.16■□□□□ 0.18
SS18L1-202ENST00000370848 GABRR2P28476 465 aa16.16■□□□□ 0.18
SS18L1-202ENST00000370848 CDC25CP30307 473 aa16.16■□□□□ 0.18
SS18L1-202ENST00000370848 CTHP32929 405 aa16.16■□□□□ 0.18
SS18L1-202ENST00000370848 ASPAP45381 313 aa16.16■□□□□ 0.18
SS18L1-202ENST00000370848 MXI1P50539 228 aa16.16■□□□□ 0.18
SS18L1-202ENST00000370848 CCINQ13939 588 aa16.16■□□□□ 0.18
SS18L1-202ENST00000370848 LRRC32Q14392 662 aa16.16■□□□□ 0.18
SS18L1-202ENST00000370848 CCDC40Q4G0X9 1142 aa16.16■□□□□ 0.18
SS18L1-202ENST00000370848 SDHAF4Q5VUM1 108 aa16.16■□□□□ 0.18
SS18L1-202ENST00000370848 KRT39Q6A163 491 aa16.16■□□□□ 0.18
SS18L1-202ENST00000370848 TSSK4Q6SA08 328 aa16.16■□□□□ 0.18
SS18L1-202ENST00000370848 FILIP1Q7Z7B0 1213 aa16.16■□□□□ 0.18
SS18L1-202ENST00000370848 TMEM150AQ86TG1 271 aa16.16■□□□□ 0.18
SS18L1-202ENST00000370848 SYNPOQ8N3V7 929 aa16.16■□□□□ 0.18
SS18L1-202ENST00000370848 SLC35C1Q96A29 364 aa16.16■□□□□ 0.18
SS18L1-202ENST00000370848 MYLPFQ96A32 169 aa16.16■□□□□ 0.18
SS18L1-202ENST00000370848 SNX25Q9H3E2 840 aa16.16■□□□□ 0.18
SS18L1-202ENST00000370848 SLITRK6Q9H5Y7 841 aa16.16■□□□□ 0.18
SS18L1-202ENST00000370848 LMAN1LQ9HAT1 526 aa16.16■□□□□ 0.18
SS18L1-202ENST00000370848 ARMCX3Q9UH62 379 aaPredicted RBP16.16■□□□□ 0.18
SS18L1-202ENST00000370848 SPECC1L-ADORA2AF8WAN1 911 aa16.15■□□□□ 0.18
SS18L1-202ENST00000370848 K7ESF4 209 aa16.15■□□□□ 0.18
SS18L1-202ENST00000370848 LRP3O75074 770 aa16.15■□□□□ 0.18
SS18L1-202ENST00000370848 HMGA1P17096 107 aaKnown RBP16.15■□□□□ 0.18
SS18L1-202ENST00000370848 SDHBP21912 280 aa16.15■□□□□ 0.18
SS18L1-202ENST00000370848 CYP2F1P24903 491 aa16.15■□□□□ 0.18
SS18L1-202ENST00000370848 PCSK1P29120 753 aa16.15■□□□□ 0.18
SS18L1-202ENST00000370848 GTF2H1P32780 548 aa16.15■□□□□ 0.18
SS18L1-202ENST00000370848 GNL1P36915 607 aaPredicted RBP16.15■□□□□ 0.18
SS18L1-202ENST00000370848 NOP14P78316 857 aaKnown RBP16.15■□□□□ 0.18
SS18L1-202ENST00000370848 ORC1Q13415 861 aa16.15■□□□□ 0.18
SS18L1-202ENST00000370848 VEPH1Q14D04 833 aa16.15■□□□□ 0.18
SS18L1-202ENST00000370848 SGSM1Q2NKQ1 1148 aa16.15■□□□□ 0.18
SS18L1-202ENST00000370848 ARHGAP15Q53QZ3 475 aa16.15■□□□□ 0.18
SS18L1-202ENST00000370848 DGKKQ5KSL6 1271 aa16.15■□□□□ 0.18
SS18L1-202ENST00000370848 TXNDC11Q6PKC3 985 aa16.15■□□□□ 0.18
SS18L1-202ENST00000370848 CELF5Q8N6W0 485 aaKnown RBP16.15■□□□□ 0.18
SS18L1-202ENST00000370848 CSGALNACT1Q8TDX6 532 aa16.15■□□□□ 0.18
SS18L1-202ENST00000370848 GIPC2Q8TF65 315 aa16.15■□□□□ 0.18
SS18L1-202ENST00000370848 SRRTQ9BXP5 876 aaKnown RBP16.15■□□□□ 0.18
SS18L1-202ENST00000370848 ATXN3LQ9H3M9 355 aa16.15■□□□□ 0.18
SS18L1-202ENST00000370848 ABCB6Q9NP58 842 aa16.15■□□□□ 0.18
SS18L1-202ENST00000370848 NCDNQ9UBB6 729 aa16.15■□□□□ 0.18
SS18L1-202ENST00000370848 HMGXB4Q9UGU5 601 aa16.15■□□□□ 0.18
SS18L1-202ENST00000370848 RWDD2AQ9UIY3 292 aa16.15■□□□□ 0.18
SS18L1-202ENST00000370848 CDH9Q9ULB4 789 aa16.15■□□□□ 0.18
SS18L1-202ENST00000370848 PCDHB5Q9Y5E4 795 aa16.15■□□□□ 0.18
SS18L1-202ENST00000370848 A8MXQ7 604 aa16.14■□□□□ 0.17
SS18L1-202ENST00000370848 DDX6P26196 483 aaKnown RBP eCLIP16.14■□□□□ 0.17
SS18L1-202ENST00000370848 CNR2P34972 360 aa16.14■□□□□ 0.17
SS18L1-202ENST00000370848 CXCL12P48061 93 aa16.14■□□□□ 0.17
SS18L1-202ENST00000370848 NLRP12P59046 1061 aa16.14■□□□□ 0.17
SS18L1-202ENST00000370848 MDH1BQ5I0G3 518 aa16.14■□□□□ 0.17
SS18L1-202ENST00000370848 GPR158Q5T848 1215 aa16.14■□□□□ 0.17
SS18L1-202ENST00000370848 LAIR1Q6GTX8 287 aa16.14■□□□□ 0.17
SS18L1-202ENST00000370848 FAM171BQ6P995 826 aa16.14■□□□□ 0.17
SS18L1-202ENST00000370848 FOXR2Q6PJQ5 311 aa16.14■□□□□ 0.17
SS18L1-202ENST00000370848 DGLUCYQ7Z3D6 616 aa16.14■□□□□ 0.17
SS18L1-202ENST00000370848 YAF2Q8IY57 180 aa16.14■□□□□ 0.17
SS18L1-202ENST00000370848 BPIFB1Q8TDL5 484 aa16.14■□□□□ 0.17
SS18L1-202ENST00000370848 SECISBP2LQ93073 1101 aaKnown RBP16.14■□□□□ 0.17
SS18L1-202ENST00000370848 FAM83CQ9BQN1 747 aa16.14■□□□□ 0.17
SS18L1-202ENST00000370848 PRR5-ARHGAP8B1AHC4 643 aa16.13■□□□□ 0.17
SS18L1-202ENST00000370848 F11P03951 625 aa16.13■□□□□ 0.17
SS18L1-202ENST00000370848 ARHGAP8P85298 464 aa16.13■□□□□ 0.17
SS18L1-202ENST00000370848 SATB1Q01826 763 aa16.13■□□□□ 0.17
SS18L1-202ENST00000370848 LMNB2Q03252 620 aa16.13■□□□□ 0.17
SS18L1-202ENST00000370848 ZNF268Q14587 947 aaPredicted RBP16.13■□□□□ 0.17
SS18L1-202ENST00000370848 NFE2Q16621 373 aaPredicted RBP16.13■□□□□ 0.17
SS18L1-202ENST00000370848 DDR2Q16832 855 aa16.13■□□□□ 0.17
SS18L1-202ENST00000370848 RBM43Q6ZSC3 357 aaKnown RBP16.13■□□□□ 0.17
SS18L1-202ENST00000370848 SPATA2LQ8IUW3 424 aaPredicted RBP16.13■□□□□ 0.17
SS18L1-202ENST00000370848 CMTM8Q8IZV2 173 aa16.13■□□□□ 0.17
SS18L1-202ENST00000370848 MLKLQ8NB16 471 aa16.13■□□□□ 0.17
SS18L1-202ENST00000370848 FBXL13Q8NEE6 735 aa16.13■□□□□ 0.17
SS18L1-202ENST00000370848 FAM200AQ8TCP9 573 aa16.13■□□□□ 0.17
SS18L1-202ENST00000370848 TAF4BQ92750 862 aa16.13■□□□□ 0.17
SS18L1-202ENST00000370848 TRMT2BQ96GJ1 504 aaKnown RBP16.13■□□□□ 0.17
SS18L1-202ENST00000370848 PCED1BQ96HM7 432 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms