RNA–Protein interactions for RNA: ENST00000370138.1

LRRC39-203, Transcript of leucine rich repeat containing 39, humanhuman

TSL 5 BASIC

Gene LRRC39, Length 1,466 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39-203ENST00000370138 EVC2Q86UK5 1308 aa4.3□□□□□ -1.72
LRRC39-203ENST00000370138 CEP164Q9UPV0 1460 aa4.3□□□□□ -1.72
LRRC39-203ENST00000370138 KANK1Q14678 1352 aa4.3□□□□□ -1.72
LRRC39-203ENST00000370138 CCDC78A2IDD5 438 aa4.3□□□□□ -1.72
LRRC39-203ENST00000370138 PJA2O43164 708 aa4.3□□□□□ -1.72
LRRC39-203ENST00000370138 FGFR1OPO95684 399 aaKnown RBP4.3□□□□□ -1.72
LRRC39-203ENST00000370138 ESRRBO95718 433 aa4.3□□□□□ -1.72
LRRC39-203ENST00000370138 HSPA1AP0DMV8 641 aaKnown RBP4.3□□□□□ -1.72
LRRC39-203ENST00000370138 HSPA1BP0DMV9 641 aaKnown RBP4.3□□□□□ -1.72
LRRC39-203ENST00000370138 GLULP15104 373 aa4.3□□□□□ -1.72
LRRC39-203ENST00000370138 ALOX15P16050 662 aaPredicted RBP4.3□□□□□ -1.72
LRRC39-203ENST00000370138 TNFAIP3P21580 790 aa4.3□□□□□ -1.72
LRRC39-203ENST00000370138 CXCR5P32302 372 aa4.3□□□□□ -1.72
LRRC39-203ENST00000370138 HALP42357 657 aa4.3□□□□□ -1.72
LRRC39-203ENST00000370138 MATR3P43243 847 aaKnown RBP eCLIP4.3□□□□□ -1.72
LRRC39-203ENST00000370138 RPS6KA3P51812 740 aa4.3□□□□□ -1.72
LRRC39-203ENST00000370138 RAP2BP61225 183 aa4.3□□□□□ -1.72
LRRC39-203ENST00000370138 CLPPQ16740 277 aaPredicted RBP4.3□□□□□ -1.72
LRRC39-203ENST00000370138 RRP12Q5JTH9 1297 aaKnown RBP4.3□□□□□ -1.72
LRRC39-203ENST00000370138 MEX3CQ5U5Q3 659 aaKnown RBP4.3□□□□□ -1.72
LRRC39-203ENST00000370138 SFMBT2Q5VUG0 894 aa4.3□□□□□ -1.72
LRRC39-203ENST00000370138 SPATA1Q5VX52 437 aa4.3□□□□□ -1.72
LRRC39-203ENST00000370138 RNF219Q5W0B1 726 aaPredicted RBP4.3□□□□□ -1.72
LRRC39-203ENST00000370138 B3GNTL1Q67FW5 361 aaPredicted RBP4.3□□□□□ -1.72
LRRC39-203ENST00000370138 PLBD1Q6P4A8 553 aa4.3□□□□□ -1.72
LRRC39-203ENST00000370138 MED25Q71SY5 747 aa4.3□□□□□ -1.72
LRRC39-203ENST00000370138 ZNF572Q7Z3I7 529 aaPredicted RBP4.3□□□□□ -1.72
LRRC39-203ENST00000370138 GPR149Q86SP6 731 aa4.3□□□□□ -1.72
LRRC39-203ENST00000370138 MAPKAPK5Q8IW41 473 aa4.3□□□□□ -1.72
LRRC39-203ENST00000370138 RHOT2Q8IXI1 618 aa4.3□□□□□ -1.72
LRRC39-203ENST00000370138 FAM98AQ8NCA5 519 aaKnown RBP4.3□□□□□ -1.72
LRRC39-203ENST00000370138 ACMSDQ8TDX5 336 aa4.3□□□□□ -1.72
LRRC39-203ENST00000370138 HVCN1Q96D96 273 aa4.3□□□□□ -1.72
LRRC39-203ENST00000370138 ZSWIM1Q9BR11 485 aa4.3□□□□□ -1.72
LRRC39-203ENST00000370138 VCX3BQ9H321 246 aa4.3□□□□□ -1.72
LRRC39-203ENST00000370138 ADARB2Q9NS39 739 aaKnown RBP4.3□□□□□ -1.72
LRRC39-203ENST00000370138 RNF181Q9P0P0 153 aa4.3□□□□□ -1.72
LRRC39-203ENST00000370138 MCM8Q9UJA3 840 aa4.3□□□□□ -1.72
LRRC39-203ENST00000370138 ITGB1BP2Q9UKP3 347 aa4.3□□□□□ -1.72
LRRC39-203ENST00000370138 TRIM17Q9Y577 477 aa4.3□□□□□ -1.72
LRRC39-203ENST00000370138 CLIP1P30622 1438 aa4.29□□□□□ -1.72
LRRC39-203ENST00000370138 VPS8Q8N3P4 1428 aa4.29□□□□□ -1.72
LRRC39-203ENST00000370138 SPATA31A6Q5VVP1 1343 aa4.29□□□□□ -1.72
LRRC39-203ENST00000370138 SYNJ2BP-COX16A0A087WUM0 186 aa4.29□□□□□ -1.72
LRRC39-203ENST00000370138 H0YC42 278 aa4.29□□□□□ -1.72
LRRC39-203ENST00000370138 TOR1BO14657 336 aa4.29□□□□□ -1.72
LRRC39-203ENST00000370138 ZSCAN9O15535 394 aaPredicted RBP4.29□□□□□ -1.72
LRRC39-203ENST00000370138 SCGB1D2O95969 90 aa4.29□□□□□ -1.72
LRRC39-203ENST00000370138 CYP11B2P19099 503 aa4.29□□□□□ -1.72
LRRC39-203ENST00000370138 S100A5P33763 92 aa4.29□□□□□ -1.72
LRRC39-203ENST00000370138 MAP2K2P36507 400 aa4.29□□□□□ -1.72
LRRC39-203ENST00000370138 STT3AP46977 705 aa4.29□□□□□ -1.72
LRRC39-203ENST00000370138 MXI1P50539 228 aa4.29□□□□□ -1.72
LRRC39-203ENST00000370138 AP2B1P63010 937 aa4.29□□□□□ -1.72
LRRC39-203ENST00000370138 FAPQ12884 760 aa4.29□□□□□ -1.72
LRRC39-203ENST00000370138 PPP2R5CQ13362 524 aa4.29□□□□□ -1.72
LRRC39-203ENST00000370138 LRRC41Q15345 812 aa4.29□□□□□ -1.72
LRRC39-203ENST00000370138 TBC1D25Q3MII6 688 aa4.29□□□□□ -1.72
LRRC39-203ENST00000370138 RTL10Q7L3V2 364 aa4.29□□□□□ -1.72
LRRC39-203ENST00000370138 RSRC2Q7L4I2 434 aaKnown RBP4.29□□□□□ -1.72
LRRC39-203ENST00000370138 RSPH3Q86UC2 560 aa4.29□□□□□ -1.72
LRRC39-203ENST00000370138 PNMA8AQ86V59 439 aaPredicted RBP4.29□□□□□ -1.72
LRRC39-203ENST00000370138 LURAP1LQ8IV03 231 aa4.29□□□□□ -1.72
LRRC39-203ENST00000370138 TMEM132CQ8N3T6 1108 aa4.29□□□□□ -1.72
LRRC39-203ENST00000370138 AFAP1Q8N556 730 aa4.29□□□□□ -1.72
LRRC39-203ENST00000370138 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.29□□□□□ -1.72
LRRC39-203ENST00000370138 GBP7Q8N8V2 638 aaPredicted RBP4.29□□□□□ -1.72
LRRC39-203ENST00000370138 ATP11CQ8NB49 1132 aa4.29□□□□□ -1.72
LRRC39-203ENST00000370138 ANKRD20A12PQ8NF67 263 aa4.29□□□□□ -1.72
LRRC39-203ENST00000370138 OR7D4Q8NG98 312 aa4.29□□□□□ -1.72
LRRC39-203ENST00000370138 TTC8Q8TAM2 541 aa4.29□□□□□ -1.72
LRRC39-203ENST00000370138 TGFBRAP1Q8WUH2 860 aa4.29□□□□□ -1.72
LRRC39-203ENST00000370138 JPH3Q8WXH2 748 aaPredicted RBP4.29□□□□□ -1.72
LRRC39-203ENST00000370138 SNX21Q969T3 373 aa4.29□□□□□ -1.72
LRRC39-203ENST00000370138 JAKMIP2Q96AA8 810 aa4.29□□□□□ -1.72
LRRC39-203ENST00000370138 EPSTI1Q96J88 318 aa4.29□□□□□ -1.72
LRRC39-203ENST00000370138 CLMNQ96JQ2 1002 aa4.29□□□□□ -1.72
LRRC39-203ENST00000370138 C8orf76Q96K31 380 aa4.29□□□□□ -1.72
LRRC39-203ENST00000370138 C1orf74Q96LT6 269 aa4.29□□□□□ -1.72
LRRC39-203ENST00000370138 ACAP3Q96P50 834 aa4.29□□□□□ -1.72
LRRC39-203ENST00000370138 RSAD1Q9HA92 442 aa4.29□□□□□ -1.72
LRRC39-203ENST00000370138 VTA1Q9NP79 307 aa4.29□□□□□ -1.72
LRRC39-203ENST00000370138 FANCFQ9NPI8 374 aa4.29□□□□□ -1.72
LRRC39-203ENST00000370138 TCP11L1Q9NUJ3 509 aa4.29□□□□□ -1.72
LRRC39-203ENST00000370138 HERC5Q9UII4 1024 aaKnown RBP4.29□□□□□ -1.72
LRRC39-203ENST00000370138 MTUS1Q9ULD2 1270 aa4.29□□□□□ -1.72
LRRC39-203ENST00000370138 ATP11BQ9Y2G3 1177 aa4.29□□□□□ -1.72
LRRC39-203ENST00000370138 C2CD2Q9Y426 696 aa4.29□□□□□ -1.72
LRRC39-203ENST00000370138 INSL6Q9Y581 213 aa4.29□□□□□ -1.72
LRRC39-203ENST00000370138 ZBED9Q6R2W3 1325 aa4.28□□□□□ -1.72
LRRC39-203ENST00000370138 BAZ1BQ9UIG0 1483 aaKnown RBP4.28□□□□□ -1.72
LRRC39-203ENST00000370138 HNRNPCL2B2RXH8 293 aa4.28□□□□□ -1.72
LRRC39-203ENST00000370138 POLR3GO15318 223 aaPredicted RBP4.28□□□□□ -1.72
LRRC39-203ENST00000370138 PIP5K1CO60331 668 aa4.28□□□□□ -1.72
LRRC39-203ENST00000370138 HNRNPCL1O60812 293 aaKnown RBP4.28□□□□□ -1.72
LRRC39-203ENST00000370138 TMCC2O75069 709 aa4.28□□□□□ -1.72
LRRC39-203ENST00000370138 PHF2O75151 1096 aa4.28□□□□□ -1.72
LRRC39-203ENST00000370138 PRKD3O94806 890 aa4.28□□□□□ -1.72
LRRC39-203ENST00000370138 PRSS23O95084 383 aa4.28□□□□□ -1.72
LRRC39-203ENST00000370138 SNRPA1P09661 255 aaKnown RBP4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms