RNA–Protein interactions for RNA: ENST00000369407.3

PHGDH-201, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 3,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-201ENST00000369407 TCRBV9S1A1TA0A576 114 aa12.85□□□□□ -0.35
PHGDH-201ENST00000369407 TPD52L2O43399 206 aaKnown RBP12.85□□□□□ -0.35
PHGDH-201ENST00000369407 UGT1A9O60656 530 aa12.85□□□□□ -0.35
PHGDH-201ENST00000369407 DNAJC6O75061 913 aa12.85□□□□□ -0.35
PHGDH-201ENST00000369407 PDE5AO76074 875 aa12.85□□□□□ -0.35
PHGDH-201ENST00000369407 MAP3K6O95382 1288 aa12.85□□□□□ -0.35
PHGDH-201ENST00000369407 INHBAP08476 426 aa12.85□□□□□ -0.35
PHGDH-201ENST00000369407 GRIA2P42262 883 aa12.85□□□□□ -0.35
PHGDH-201ENST00000369407 CDKN2BP42772 138 aa12.85□□□□□ -0.35
PHGDH-201ENST00000369407 PEX6Q13608 980 aa12.85□□□□□ -0.35
PHGDH-201ENST00000369407 LIN52Q52LA3 116 aa12.85□□□□□ -0.35
PHGDH-201ENST00000369407 TFDP3Q5H9I0 405 aa12.85□□□□□ -0.35
PHGDH-201ENST00000369407 RASSF3Q86WH2 238 aa12.85□□□□□ -0.35
PHGDH-201ENST00000369407 NCAPG2Q86XI2 1143 aa12.85□□□□□ -0.35
PHGDH-201ENST00000369407 MAP4K3Q8IVH8 894 aa12.85□□□□□ -0.35
PHGDH-201ENST00000369407 PPIL6Q8IXY8 311 aa12.85□□□□□ -0.35
PHGDH-201ENST00000369407 GPD1LQ8N335 351 aa12.85□□□□□ -0.35
PHGDH-201ENST00000369407 ZBTB45Q96K62 511 aaPredicted RBP12.85□□□□□ -0.35
PHGDH-201ENST00000369407 SRPK1Q96SB4 655 aaKnown RBP12.85□□□□□ -0.35
PHGDH-201ENST00000369407 MMP19Q99542 508 aa12.85□□□□□ -0.35
PHGDH-201ENST00000369407 TUBB6Q9BUF5 446 aa12.85□□□□□ -0.35
PHGDH-201ENST00000369407 UGT1A7Q9HAW7 530 aa12.85□□□□□ -0.35
PHGDH-201ENST00000369407 UGT1A10Q9HAW8 530 aa12.85□□□□□ -0.35
PHGDH-201ENST00000369407 UGT1A8Q9HAW9 530 aa12.85□□□□□ -0.35
PHGDH-201ENST00000369407 TJP2Q9UDY2 1190 aa12.85□□□□□ -0.35
PHGDH-201ENST00000369407 PCSK1NQ9UHG2 260 aa12.85□□□□□ -0.35
PHGDH-201ENST00000369407 IP6K2Q9UHH9 426 aa12.85□□□□□ -0.35
PHGDH-201ENST00000369407 COL24A1Q17RW2 1714 aa12.84□□□□□ -0.35
PHGDH-201ENST00000369407 TRIM49D1C9J1S8 452 aa12.84□□□□□ -0.35
PHGDH-201ENST00000369407 PMM2O15305 246 aa12.84□□□□□ -0.35
PHGDH-201ENST00000369407 ACO1P21399 889 aaKnown RBP12.84□□□□□ -0.35
PHGDH-201ENST00000369407 HIRAP54198 1017 aaPredicted RBP12.84□□□□□ -0.35
PHGDH-201ENST00000369407 PDE1BQ01064 536 aa12.84□□□□□ -0.35
PHGDH-201ENST00000369407 KRT72Q14CN4 511 aa12.84□□□□□ -0.35
PHGDH-201ENST00000369407 TAF5Q15542 800 aa12.84□□□□□ -0.35
PHGDH-201ENST00000369407 CHI3L2Q15782 390 aa12.84□□□□□ -0.35
PHGDH-201ENST00000369407 KLHL38Q2WGJ6 581 aa12.84□□□□□ -0.35
PHGDH-201ENST00000369407 SFT2D3Q587I9 215 aa12.84□□□□□ -0.35
PHGDH-201ENST00000369407 RALGPS1Q5JS13 557 aa12.84□□□□□ -0.35
PHGDH-201ENST00000369407 FAXCQ5TGI0 409 aa12.84□□□□□ -0.35
PHGDH-201ENST00000369407 SATL1Q86VE3 508 aa12.84□□□□□ -0.35
PHGDH-201ENST00000369407 TMPRSS6Q8IU80 811 aa12.84□□□□□ -0.35
PHGDH-201ENST00000369407 LARGE2Q8N3Y3 721 aa12.84□□□□□ -0.35
PHGDH-201ENST00000369407 NAT8LQ8N9F0 302 aa12.84□□□□□ -0.35
PHGDH-201ENST00000369407 CERKQ8TCT0 537 aa12.84□□□□□ -0.35
PHGDH-201ENST00000369407 DNAJC1Q96KC8 554 aaKnown RBP12.84□□□□□ -0.35
PHGDH-201ENST00000369407 CLIC5Q9NZA1 410 aa12.84□□□□□ -0.35
PHGDH-201ENST00000369407 SNCAIPQ9Y6H5 919 aa12.84□□□□□ -0.35
PHGDH-201ENST00000369407 TMEM191CA6NGB0 347 aa12.84□□□□□ -0.35
PHGDH-201ENST00000369407 TCP10L2B9ZVM9 353 aa12.84□□□□□ -0.35
PHGDH-201ENST00000369407 COPEO14579 308 aa12.84□□□□□ -0.35
PHGDH-201ENST00000369407 PGM3O95394 542 aa12.84□□□□□ -0.35
PHGDH-201ENST00000369407 VNN1O95497 513 aa12.84□□□□□ -0.35
PHGDH-201ENST00000369407 TMEM191BP0C7N4 346 aa12.84□□□□□ -0.35
PHGDH-201ENST00000369407 MAPTP10636 758 aaKnown RBP12.84□□□□□ -0.35
PHGDH-201ENST00000369407 MRPS9P82933 396 aaKnown RBP12.84□□□□□ -0.35
PHGDH-201ENST00000369407 MTMR1Q13613 665 aa12.84□□□□□ -0.35
PHGDH-201ENST00000369407 TKFCQ3LXA3 575 aa12.84□□□□□ -0.35
PHGDH-201ENST00000369407 DNAJC24Q6P3W2 148 aa12.84□□□□□ -0.35
PHGDH-201ENST00000369407 SLC26A7Q8TE54 656 aa12.84□□□□□ -0.35
PHGDH-201ENST00000369407 APOPT1Q96IL0 206 aa12.84□□□□□ -0.35
PHGDH-201ENST00000369407 ZDHHC15Q96MV8 337 aa12.84□□□□□ -0.35
PHGDH-201ENST00000369407 CYP4F11Q9HBI6 524 aa12.84□□□□□ -0.35
PHGDH-201ENST00000369407 DMAP1Q9NPF5 467 aaPredicted RBP12.84□□□□□ -0.35
PHGDH-201ENST00000369407 MRPL11Q9Y3B7 192 aaKnown RBP12.84□□□□□ -0.35
PHGDH-201ENST00000369407 NUB1Q9Y5A7 615 aa12.84□□□□□ -0.35
PHGDH-201ENST00000369407 FOCADQ5VW36 1801 aa12.84□□□□□ -0.35
PHGDH-201ENST00000369407 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.83□□□□□ -0.35
PHGDH-201ENST00000369407 SPECC1L-ADORA2AF8WAN1 911 aa12.83□□□□□ -0.35
PHGDH-201ENST00000369407 CCNE2O96020 404 aa12.83□□□□□ -0.35
PHGDH-201ENST00000369407 C6orf222P0C671 652 aaPredicted RBP12.83□□□□□ -0.35
PHGDH-201ENST00000369407 GTF2H1P32780 548 aa12.83□□□□□ -0.35
PHGDH-201ENST00000369407 AP2B1P63010 937 aa12.83□□□□□ -0.35
PHGDH-201ENST00000369407 CUL2Q13617 745 aa12.83□□□□□ -0.35
PHGDH-201ENST00000369407 RNF111Q6ZNA4 994 aa12.83□□□□□ -0.35
PHGDH-201ENST00000369407 ANO5Q75V66 913 aa12.83□□□□□ -0.35
PHGDH-201ENST00000369407 PDIK1LQ8N165 341 aa12.83□□□□□ -0.35
PHGDH-201ENST00000369407 ARHGAP24Q8N264 748 aa12.83□□□□□ -0.35
PHGDH-201ENST00000369407 TMC2Q8TDI7 906 aa12.83□□□□□ -0.35
PHGDH-201ENST00000369407 DHRS4Q9BTZ2 278 aa12.83□□□□□ -0.35
PHGDH-201ENST00000369407 AGO4Q9HCK5 861 aaKnown RBP12.83□□□□□ -0.35
PHGDH-201ENST00000369407 PACSIN3Q9UKS6 424 aa12.83□□□□□ -0.35
PHGDH-201ENST00000369407 STRIP2Q9ULQ0 834 aa12.83□□□□□ -0.35
PHGDH-201ENST00000369407 CAPN14A8MX76 684 aa12.83□□□□□ -0.36
PHGDH-201ENST00000369407 A8MXQ7 604 aa12.83□□□□□ -0.36
PHGDH-201ENST00000369407 CXorf49A8MYA2 514 aaPredicted RBP12.83□□□□□ -0.36
PHGDH-201ENST00000369407 ZNF189O75820 626 aaPredicted RBP12.83□□□□□ -0.36
PHGDH-201ENST00000369407 ITGAVP06756 1048 aa12.83□□□□□ -0.36
PHGDH-201ENST00000369407 DGKZQ13574 1117 aa12.83□□□□□ -0.36
PHGDH-201ENST00000369407 DLGAP5Q15398 846 aa12.83□□□□□ -0.36
PHGDH-201ENST00000369407 NPNTQ6UXI9 565 aa12.83□□□□□ -0.36
PHGDH-201ENST00000369407 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.83□□□□□ -0.36
PHGDH-201ENST00000369407 ZNF606Q8WXB4 792 aa12.83□□□□□ -0.36
PHGDH-201ENST00000369407 CEP170P1Q96L14 293 aa12.83□□□□□ -0.36
PHGDH-201ENST00000369407 PLEKHG4BQ96PX9 1271 aa12.83□□□□□ -0.36
PHGDH-201ENST00000369407 EHMT1Q9H9B1 1298 aa12.83□□□□□ -0.36
PHGDH-201ENST00000369407 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.83□□□□□ -0.36
PHGDH-201ENST00000369407 BLOC1S6Q9UL45 172 aa12.83□□□□□ -0.36
PHGDH-201ENST00000369407 CCPG1Q9ULG6 757 aa12.83□□□□□ -0.36
PHGDH-201ENST00000369407 PLA2G4CQ9UP65 541 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms