RNA–Protein interactions for RNA: ENST00000368291.6

ECHDC1-203, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-203ENST00000368291 PHLDB3Q6NSJ2 640 aa23.79■■□□□ 1.4
ECHDC1-203ENST00000368291 GPIHBP1Q8IV16 184 aa23.79■■□□□ 1.4
ECHDC1-203ENST00000368291 ARID3BQ8IVW6 561 aaPredicted RBP23.79■■□□□ 1.4
ECHDC1-203ENST00000368291 FAM114A1Q8IWE2 563 aa23.79■■□□□ 1.4
ECHDC1-203ENST00000368291 PPM1KQ8N3J5 372 aa23.79■■□□□ 1.4
ECHDC1-203ENST00000368291 GCNAQ96QF7 691 aa23.79■■□□□ 1.4
ECHDC1-203ENST00000368291 INTS2Q9H0H0 1204 aaKnown RBP23.79■■□□□ 1.4
ECHDC1-203ENST00000368291 DMAP1Q9NPF5 467 aaPredicted RBP23.79■■□□□ 1.4
ECHDC1-203ENST00000368291 GCNT4Q9P109 453 aa23.79■■□□□ 1.4
ECHDC1-203ENST00000368291 NFE2L3Q9Y4A8 694 aa23.79■■□□□ 1.4
ECHDC1-203ENST00000368291 TICRRQ7Z2Z1 1910 aa23.79■■□□□ 1.4
ECHDC1-203ENST00000368291 PRR33A8MZF0 331 aa23.78■■□□□ 1.4
ECHDC1-203ENST00000368291 WEE1P30291 646 aa23.78■■□□□ 1.4
ECHDC1-203ENST00000368291 GPC5P78333 572 aa23.78■■□□□ 1.4
ECHDC1-203ENST00000368291 MAN2A1Q16706 1144 aa23.78■■□□□ 1.4
ECHDC1-203ENST00000368291 TXNDC8Q6A555 127 aa23.78■■□□□ 1.4
ECHDC1-203ENST00000368291 VITQ6UXI7 678 aa23.78■■□□□ 1.4
ECHDC1-203ENST00000368291 CLEC20AQ6ZU45 233 aa23.78■■□□□ 1.4
ECHDC1-203ENST00000368291 NUP93Q8N1F7 819 aa23.78■■□□□ 1.4
ECHDC1-203ENST00000368291 HEXIM2Q96MH2 286 aaKnown RBP23.78■■□□□ 1.4
ECHDC1-203ENST00000368291 CRACR2AQ9BSW2 395 aa23.78■■□□□ 1.4
ECHDC1-203ENST00000368291 SLC2A4RGQ9NR83 387 aa23.78■■□□□ 1.4
ECHDC1-203ENST00000368291 IL37Q9NZH6 218 aa23.78■■□□□ 1.4
ECHDC1-203ENST00000368291 PRAMEF12O95522 483 aa23.78■■□□□ 1.4
ECHDC1-203ENST00000368291 CFHP08603 1231 aa23.78■■□□□ 1.4
ECHDC1-203ENST00000368291 TRIM21P19474 475 aaKnown RBP23.78■■□□□ 1.4
ECHDC1-203ENST00000368291 MAP3K7CLP57077 242 aa23.78■■□□□ 1.4
ECHDC1-203ENST00000368291 GCNT1Q02742 428 aa23.78■■□□□ 1.4
ECHDC1-203ENST00000368291 TYRO3Q06418 890 aa23.78■■□□□ 1.4
ECHDC1-203ENST00000368291 HFE2Q6ZVN8 426 aa23.78■■□□□ 1.4
ECHDC1-203ENST00000368291 RRAGAQ7L523 313 aa23.78■■□□□ 1.4
ECHDC1-203ENST00000368291 BMP8AQ7Z5Y6 402 aa23.78■■□□□ 1.4
ECHDC1-203ENST00000368291 MAB21L3Q8N8X9 362 aa23.78■■□□□ 1.4
ECHDC1-203ENST00000368291 KREMEN1Q96MU8 473 aa23.78■■□□□ 1.4
ECHDC1-203ENST00000368291 LRRC3BQ96PB8 259 aa23.78■■□□□ 1.4
ECHDC1-203ENST00000368291 TUBGCP2Q9BSJ2 902 aa23.78■■□□□ 1.4
ECHDC1-203ENST00000368291 KCNJ18B7U540 433 aa23.77■■□□□ 1.4
ECHDC1-203ENST00000368291 HHLA1C9JL84 531 aa23.77■■□□□ 1.4
ECHDC1-203ENST00000368291 PDGFBP01127 241 aaPredicted RBP23.77■■□□□ 1.4
ECHDC1-203ENST00000368291 FAM200BP0CF97 657 aa23.77■■□□□ 1.4
ECHDC1-203ENST00000368291 SLC9A1P19634 815 aa23.77■■□□□ 1.4
ECHDC1-203ENST00000368291 DDX6P26196 483 aaKnown RBP eCLIP23.77■■□□□ 1.42e-7■■■□□ 18.3
ECHDC1-203ENST00000368291 SLC5A3P53794 718 aa23.77■■□□□ 1.4
ECHDC1-203ENST00000368291 YWHAEP62258 255 aaKnown RBP23.77■■□□□ 1.4
ECHDC1-203ENST00000368291 KCNJ12Q14500 433 aa23.77■■□□□ 1.4
ECHDC1-203ENST00000368291 KLHL40Q2TBA0 621 aa23.77■■□□□ 1.4
ECHDC1-203ENST00000368291 CDKAL1Q5VV42 579 aa23.77■■□□□ 1.4
ECHDC1-203ENST00000368291 ARHGAP17Q68EM7 881 aa23.77■■□□□ 1.4
ECHDC1-203ENST00000368291 TRIM65Q6PJ69 517 aa23.77■■□□□ 1.4
ECHDC1-203ENST00000368291 MON1AQ86VX9 555 aa23.77■■□□□ 1.4
ECHDC1-203ENST00000368291 CMTM8Q8IZV2 173 aa23.77■■□□□ 1.4
ECHDC1-203ENST00000368291 SCAMP5Q8TAC9 235 aa23.77■■□□□ 1.4
ECHDC1-203ENST00000368291 MRPS31Q92665 395 aaKnown RBP23.77■■□□□ 1.4
ECHDC1-203ENST00000368291 COL4A3Q01955 1670 aa23.77■■□□□ 1.39
ECHDC1-203ENST00000368291 KMT2EQ8IZD2 1858 aa23.76■■□□□ 1.39
ECHDC1-203ENST00000368291 GTPBP10A4D1E9 387 aaKnown RBP23.76■■□□□ 1.39
ECHDC1-203ENST00000368291 SOBPA7XYQ1 873 aa23.76■■□□□ 1.39
ECHDC1-203ENST00000368291 HEPACAM2A8MVW5 462 aa23.76■■□□□ 1.39
ECHDC1-203ENST00000368291 RNF225M0QZC1 329 aaPredicted RBP23.76■■□□□ 1.39
ECHDC1-203ENST00000368291 GRM2Q14416 872 aa23.76■■□□□ 1.39
ECHDC1-203ENST00000368291 VWA3BQ502W6 1294 aa23.76■■□□□ 1.39
ECHDC1-203ENST00000368291 TCP11X2Q5H9J9 407 aa23.76■■□□□ 1.39
ECHDC1-203ENST00000368291 IER5LQ5T953 404 aa23.76■■□□□ 1.39
ECHDC1-203ENST00000368291 GBP6Q6ZN66 633 aa23.76■■□□□ 1.39
ECHDC1-203ENST00000368291 SLC22A12Q96S37 553 aa23.76■■□□□ 1.39
ECHDC1-203ENST00000368291 SMG9Q9H0W8 520 aaKnown RBP23.76■■□□□ 1.39
ECHDC1-203ENST00000368291 NDST4Q9H3R1 872 aa23.76■■□□□ 1.39
ECHDC1-203ENST00000368291 WNT16Q9UBV4 365 aa23.76■■□□□ 1.39
ECHDC1-203ENST00000368291 ZMYM5Q9UJ78 669 aa23.76■■□□□ 1.39
ECHDC1-203ENST00000368291 ZNF318Q5VUA4 2279 aa23.75■■□□□ 1.39
ECHDC1-203ENST00000368291 FAM92AA1XBS5 289 aa23.75■■□□□ 1.39
ECHDC1-203ENST00000368291 RTN3O95197 1032 aaPredicted RBP23.75■■□□□ 1.39
ECHDC1-203ENST00000368291 PON1P27169 355 aa23.75■■□□□ 1.39
ECHDC1-203ENST00000368291 APBA1Q02410 837 aa23.75■■□□□ 1.39
ECHDC1-203ENST00000368291 IFRD2Q12894 506 aaPredicted RBP23.75■■□□□ 1.39
ECHDC1-203ENST00000368291 TAF10Q12962 218 aa23.75■■□□□ 1.39
ECHDC1-203ENST00000368291 TMEM270Q6UE05 265 aa23.75■■□□□ 1.39
ECHDC1-203ENST00000368291 GPRIN1Q7Z2K8 1008 aa23.75■■□□□ 1.39
ECHDC1-203ENST00000368291 MFSD6LQ8IWD5 586 aa23.75■■□□□ 1.39
ECHDC1-203ENST00000368291 DUSP16Q9BY84 665 aa23.75■■□□□ 1.39
ECHDC1-203ENST00000368291 DNAI2Q9GZS0 605 aa23.75■■□□□ 1.39
ECHDC1-203ENST00000368291 FANCLQ9NW38 375 aa23.75■■□□□ 1.39
ECHDC1-203ENST00000368291 EHD2Q9NZN4 543 aa23.75■■□□□ 1.39
ECHDC1-203ENST00000368291 KRBA1A5PL33 1030 aa23.74■■□□□ 1.39
ECHDC1-203ENST00000368291 C2orf78A6NCI8 922 aa23.74■■□□□ 1.39
ECHDC1-203ENST00000368291 ZNF840PA6NDX5 716 aa23.74■■□□□ 1.39
ECHDC1-203ENST00000368291 PRKCSHP14314 528 aaPredicted RBP23.74■■□□□ 1.39
ECHDC1-203ENST00000368291 NPR3P17342 541 aa23.74■■□□□ 1.39
ECHDC1-203ENST00000368291 PSMC3P17980 439 aa23.74■■□□□ 1.39
ECHDC1-203ENST00000368291 EEF1GP26641 437 aaKnown RBP23.74■■□□□ 1.39
ECHDC1-203ENST00000368291 YWHAQP27348 245 aa23.74■■□□□ 1.39
ECHDC1-203ENST00000368291 NCAPHQ15003 741 aa23.74■■□□□ 1.39
ECHDC1-203ENST00000368291 EXOC3L4Q17RC7 722 aa23.74■■□□□ 1.39
ECHDC1-203ENST00000368291 DPY19L2P1Q6NXN4 242 aa23.74■■□□□ 1.39
ECHDC1-203ENST00000368291 GJB7Q6PEY0 223 aa23.74■■□□□ 1.39
ECHDC1-203ENST00000368291 PBXIP1Q96AQ6 731 aa23.74■■□□□ 1.39
ECHDC1-203ENST00000368291 E2F7Q96AV8 911 aa23.74■■□□□ 1.39
ECHDC1-203ENST00000368291 CYP2S1Q96SQ9 504 aa23.74■■□□□ 1.39
ECHDC1-203ENST00000368291 UBE2TQ9NPD8 197 aaPredicted RBP23.74■■□□□ 1.39
ECHDC1-203ENST00000368291 CNTN6Q9UQ52 1028 aa23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms