RNA–Protein interactions for RNA: ENST00000366699.3

TRIM11-202, Transcript of tripartite motif containing 11, humanhuman

TSL 2 BASIC

Gene TRIM11, Length 2,511 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11-202ENST00000366699 HIF1AQ16665 826 aa18.3■□□□□ 0.52
TRIM11-202ENST00000366699 LDLRAD1Q5T700 205 aa18.3■□□□□ 0.52
TRIM11-202ENST00000366699 TBC1D1Q86TI0 1168 aaPredicted RBP18.3■□□□□ 0.52
TRIM11-202ENST00000366699 FAM228AQ86W67 206 aa18.3■□□□□ 0.52
TRIM11-202ENST00000366699 KCTD6Q8NC69 237 aa18.3■□□□□ 0.52
TRIM11-202ENST00000366699 CXorf38Q8TB03 319 aa18.3■□□□□ 0.52
TRIM11-202ENST00000366699 MCRS1Q96EZ8 462 aa18.3■□□□□ 0.52
TRIM11-202ENST00000366699 ECT2Q9H8V3 914 aa18.3■□□□□ 0.52
TRIM11-202ENST00000366699 GGT7Q9UJ14 662 aa18.3■□□□□ 0.52
TRIM11-202ENST00000366699 VTNP04004 478 aa18.3■□□□□ 0.52
TRIM11-202ENST00000366699 NCALDP61601 193 aa18.3■□□□□ 0.52
TRIM11-202ENST00000366699 SPARCL1Q14515 664 aa18.3■□□□□ 0.52
TRIM11-202ENST00000366699 STILQ15468 1287 aa18.3■□□□□ 0.52
TRIM11-202ENST00000366699 HP1BP3Q5SSJ5 553 aaPredicted RBP18.3■□□□□ 0.52
TRIM11-202ENST00000366699 PAIP2Q9BPZ3 127 aaKnown RBP18.3■□□□□ 0.52
TRIM11-202ENST00000366699 SLC45A1Q9Y2W3 748 aa18.3■□□□□ 0.52
TRIM11-202ENST00000366699 FARP1Q9Y4F1 1045 aaPredicted RBP18.3■□□□□ 0.52
TRIM11-202ENST00000366699 SBF1O95248 1867 aa18.3■□□□□ 0.52
TRIM11-202ENST00000366699 UNCXA6NJT0 531 aa18.29■□□□□ 0.52
TRIM11-202ENST00000366699 H3BRB1 525 aa18.29■□□□□ 0.52
TRIM11-202ENST00000366699 SMAPO00193 183 aa18.29■□□□□ 0.52
TRIM11-202ENST00000366699 CST8O60676 142 aa18.29■□□□□ 0.52
TRIM11-202ENST00000366699 CSDE1O75534 798 aaKnown RBP18.29■□□□□ 0.52
TRIM11-202ENST00000366699 ATP6V1G2O95670 118 aa18.29■□□□□ 0.52
TRIM11-202ENST00000366699 FOXN2P32314 431 aa18.29■□□□□ 0.52
TRIM11-202ENST00000366699 INCA1Q0VD86 236 aa18.29■□□□□ 0.52
TRIM11-202ENST00000366699 TAZQ16635 292 aa18.29■□□□□ 0.52
TRIM11-202ENST00000366699 ILDR2Q71H61 639 aa18.29■□□□□ 0.52
TRIM11-202ENST00000366699 ZNF410Q86VK4 478 aa18.29■□□□□ 0.52
TRIM11-202ENST00000366699 PPIL6Q8IXY8 311 aa18.29■□□□□ 0.52
TRIM11-202ENST00000366699 ACTL9Q8TC94 416 aa18.29■□□□□ 0.52
TRIM11-202ENST00000366699 DENND1AQ8TEH3 1009 aa18.29■□□□□ 0.52
TRIM11-202ENST00000366699 RSAD2Q8WXG1 361 aa18.29■□□□□ 0.52
TRIM11-202ENST00000366699 TWNKQ96RR1 684 aa18.29■□□□□ 0.52
TRIM11-202ENST00000366699 TUT1Q9H6E5 874 aaKnown RBP18.29■□□□□ 0.52
TRIM11-202ENST00000366699 DPP3Q9NY33 737 aa18.29■□□□□ 0.52
TRIM11-202ENST00000366699 PHBP35232 272 aa18.29■□□□□ 0.52
TRIM11-202ENST00000366699 PCK1P35558 622 aa18.29■□□□□ 0.52
TRIM11-202ENST00000366699 GPD2P43304 727 aa18.29■□□□□ 0.52
TRIM11-202ENST00000366699 OTUD4Q01804 1114 aaKnown RBP18.29■□□□□ 0.52
TRIM11-202ENST00000366699 PKN2Q16513 984 aaKnown RBP18.29■□□□□ 0.52
TRIM11-202ENST00000366699 SMTNL2Q2TAL5 461 aa18.29■□□□□ 0.52
TRIM11-202ENST00000366699 CGB2Q6NT52 195 aa18.29■□□□□ 0.52
TRIM11-202ENST00000366699 FITM2Q8N6M3 262 aa18.29■□□□□ 0.52
TRIM11-202ENST00000366699 PPP1R16BQ96T49 567 aa18.29■□□□□ 0.52
TRIM11-202ENST00000366699 C16orf70Q9BSU1 422 aa18.29■□□□□ 0.52
TRIM11-202ENST00000366699 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.29■□□□□ 0.52
TRIM11-202ENST00000366699 PSMC3IPQ9P2W1 217 aaPredicted RBP18.29■□□□□ 0.52
TRIM11-202ENST00000366699 FETUBQ9UGM5 382 aa18.29■□□□□ 0.52
TRIM11-202ENST00000366699 STARD13Q9Y3M8 1113 aa18.29■□□□□ 0.52
TRIM11-202ENST00000366699 A0A1B0GUA9 196 aa18.28■□□□□ 0.52
TRIM11-202ENST00000366699 SPAG7O75391 227 aa18.28■□□□□ 0.52
TRIM11-202ENST00000366699 ZNF286BP0CG31 522 aa18.28■□□□□ 0.52
TRIM11-202ENST00000366699 NQO1P15559 274 aaKnown RBP18.28■□□□□ 0.52
TRIM11-202ENST00000366699 ARL4CP56559 192 aa18.28■□□□□ 0.52
TRIM11-202ENST00000366699 DYNLT1P63172 113 aa18.28■□□□□ 0.52
TRIM11-202ENST00000366699 CCDC15Q0P6D6 951 aa18.28■□□□□ 0.52
TRIM11-202ENST00000366699 ORC1Q13415 861 aa18.28■□□□□ 0.52
TRIM11-202ENST00000366699 PREPLQ4J6C6 727 aaPredicted RBP18.28■□□□□ 0.52
TRIM11-202ENST00000366699 KCNT1Q5JUK3 1230 aa18.28■□□□□ 0.52
TRIM11-202ENST00000366699 GJC2Q5T442 439 aaPredicted RBP18.28■□□□□ 0.52
TRIM11-202ENST00000366699 FAM102AQ5T9C2 384 aaPredicted RBP18.28■□□□□ 0.52
TRIM11-202ENST00000366699 WLSQ5T9L3 541 aa18.28■□□□□ 0.52
TRIM11-202ENST00000366699 RGS9BPQ6ZS82 235 aa18.28■□□□□ 0.52
TRIM11-202ENST00000366699 ARFGAP1Q8N6T3 406 aa18.28■□□□□ 0.52
TRIM11-202ENST00000366699 EVPLQ92817 2033 aa18.28■□□□□ 0.52
TRIM11-202ENST00000366699 NT5C1AQ9BXI3 368 aa18.28■□□□□ 0.52
TRIM11-202ENST00000366699 RSAD1Q9HA92 442 aa18.28■□□□□ 0.52
TRIM11-202ENST00000366699 TJP2Q9UDY2 1190 aa18.28■□□□□ 0.52
TRIM11-202ENST00000366699 TSPAN1O60635 241 aa18.28■□□□□ 0.52
TRIM11-202ENST00000366699 IL1R2P27930 398 aa18.28■□□□□ 0.52
TRIM11-202ENST00000366699 GJA5P36382 358 aa18.28■□□□□ 0.52
TRIM11-202ENST00000366699 CTCFP49711 727 aaPredicted RBP18.28■□□□□ 0.52
TRIM11-202ENST00000366699 DCAF4L1Q3SXM0 396 aa18.28■□□□□ 0.52
TRIM11-202ENST00000366699 PNMA8AQ86V59 439 aaPredicted RBP18.28■□□□□ 0.52
TRIM11-202ENST00000366699 EMC1Q8N766 993 aa18.28■□□□□ 0.52
TRIM11-202ENST00000366699 CMASQ8NFW8 434 aaPredicted RBP18.28■□□□□ 0.52
TRIM11-202ENST00000366699 MAK16Q9BXY0 300 aaKnown RBP18.28■□□□□ 0.52
TRIM11-202ENST00000366699 NOD2Q9HC29 1040 aa18.28■□□□□ 0.52
TRIM11-202ENST00000366699 HMGXB4Q9UGU5 601 aa18.28■□□□□ 0.52
TRIM11-202ENST00000366699 USP18Q9UMW8 372 aa18.28■□□□□ 0.52
TRIM11-202ENST00000366699 DESP17661 470 aa18.27■□□□□ 0.52
TRIM11-202ENST00000366699 GCLCP48506 637 aaPredicted RBP18.27■□□□□ 0.52
TRIM11-202ENST00000366699 ZNF143P52747 638 aaPredicted RBP18.27■□□□□ 0.52
TRIM11-202ENST00000366699 GEMIN4P57678 1058 aaKnown RBP18.27■□□□□ 0.52
TRIM11-202ENST00000366699 CDC42EP1Q00587 391 aa18.27■□□□□ 0.52
TRIM11-202ENST00000366699 EFHC2Q5JST6 749 aa18.27■□□□□ 0.52
TRIM11-202ENST00000366699 LCLAT1Q6UWP7 414 aa18.27■□□□□ 0.52
TRIM11-202ENST00000366699 MAMDC4Q6UXC1 1216 aa18.27■□□□□ 0.52
TRIM11-202ENST00000366699 CAPN12Q6ZSI9 719 aa18.27■□□□□ 0.52
TRIM11-202ENST00000366699 CEP57Q86XR8 500 aa18.27■□□□□ 0.52
TRIM11-202ENST00000366699 RFX6Q8HWS3 928 aa18.27■□□□□ 0.52
TRIM11-202ENST00000366699 PYROXD1Q8WU10 500 aa18.27■□□□□ 0.52
TRIM11-202ENST00000366699 KLHL29Q96CT2 875 aa18.27■□□□□ 0.52
TRIM11-202ENST00000366699 TACO1Q9BSH4 297 aaKnown RBP18.27■□□□□ 0.52
TRIM11-202ENST00000366699 SAE1Q9UBE0 346 aaPredicted RBP18.27■□□□□ 0.52
TRIM11-202ENST00000366699 BAIAP2L1Q9UHR4 511 aa18.27■□□□□ 0.52
TRIM11-202ENST00000366699 APOC4-APOC2K7ER74 178 aa18.27■□□□□ 0.52
TRIM11-202ENST00000366699 PDHXO00330 501 aa18.27■□□□□ 0.52
TRIM11-202ENST00000366699 TRUB2O95900 331 aaKnown RBP18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms