RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 ACADSBP45954 432 aa9.62□□□□□ -0.87
VPS13A-203ENST00000360280 CDC16Q13042 620 aa9.62□□□□□ -0.87
VPS13A-203ENST00000360280 KCNB1Q14721 858 aa9.62□□□□□ -0.87
VPS13A-203ENST00000360280 ARMCX6Q7L4S7 300 aa9.62□□□□□ -0.87
VPS13A-203ENST00000360280 CCDC33Q8N5R6 958 aa9.62□□□□□ -0.87
VPS13A-203ENST00000360280 ISCUQ9H1K1 167 aa9.62□□□□□ -0.87
VPS13A-203ENST00000360280 STN1Q9H668 368 aaKnown RBP9.62□□□□□ -0.87
VPS13A-203ENST00000360280 KCND2Q9NZV8 630 aa9.62□□□□□ -0.87
VPS13A-203ENST00000360280 CAMSAP1Q5T5Y3 1602 aa9.61□□□□□ -0.87
VPS13A-203ENST00000360280 MGAT4DA6NG13 374 aa9.61□□□□□ -0.87
VPS13A-203ENST00000360280 ZNF24P17028 368 aa9.61□□□□□ -0.87
VPS13A-203ENST00000360280 PCSK7Q16549 785 aa9.61□□□□□ -0.87
VPS13A-203ENST00000360280 DENND1BQ6P3S1 775 aa9.61□□□□□ -0.87
VPS13A-203ENST00000360280 KCNV1Q6PIU1 500 aa9.61□□□□□ -0.87
VPS13A-203ENST00000360280 ZNF438Q7Z4V0 828 aa9.61□□□□□ -0.87
VPS13A-203ENST00000360280 CCDC185Q8N715 623 aa9.61□□□□□ -0.87
VPS13A-203ENST00000360280 MS4A14Q96JA4 679 aa9.61□□□□□ -0.87
VPS13A-203ENST00000360280 KCTD14Q9BQ13 255 aaPredicted RBP9.61□□□□□ -0.87
VPS13A-203ENST00000360280 PCDHA6Q9UN73 950 aa9.61□□□□□ -0.87
VPS13A-203ENST00000360280 PCDHA8Q9Y5H6 950 aa9.61□□□□□ -0.87
VPS13A-203ENST00000360280 FAM20BO75063 409 aa9.61□□□□□ -0.87
VPS13A-203ENST00000360280 CYP2D6P10635 497 aa9.61□□□□□ -0.87
VPS13A-203ENST00000360280 ARHGDIBP52566 201 aa9.61□□□□□ -0.87
VPS13A-203ENST00000360280 FAM98BQ52LJ0 330 aaKnown RBP9.61□□□□□ -0.87
VPS13A-203ENST00000360280 TCEAL5Q5H9L2 206 aa9.61□□□□□ -0.87
VPS13A-203ENST00000360280 MMGT1Q8N4V1 131 aa9.61□□□□□ -0.87
VPS13A-203ENST00000360280 RAD18Q9NS91 495 aa9.61□□□□□ -0.87
VPS13A-203ENST00000360280 SSU72P8A0A1W2PR75 194 aa9.61□□□□□ -0.87
VPS13A-203ENST00000360280 CLRN2A0PK11 232 aa9.61□□□□□ -0.87
VPS13A-203ENST00000360280 ADORA1P30542 326 aa9.61□□□□□ -0.87
VPS13A-203ENST00000360280 EEPD1Q7L9B9 569 aa9.61□□□□□ -0.87
VPS13A-203ENST00000360280 ERO1BQ86YB8 467 aa9.61□□□□□ -0.87
VPS13A-203ENST00000360280 PSMB9P28065 219 aa9.61□□□□□ -0.87
VPS13A-203ENST00000360280 FCHO2Q0JRZ9 810 aa9.61□□□□□ -0.87
VPS13A-203ENST00000360280 MFSD4BQ5TF39 518 aa9.61□□□□□ -0.87
VPS13A-203ENST00000360280 BARGINQ6ZT62 677 aa9.61□□□□□ -0.87
VPS13A-203ENST00000360280 RBM12Q9NTZ6 932 aaKnown RBP9.61□□□□□ -0.87
VPS13A-203ENST00000360280 GSTK1Q9Y2Q3 226 aa9.61□□□□□ -0.87
VPS13A-203ENST00000360280 CNPP09543 421 aaKnown RBP9.61□□□□□ -0.87
VPS13A-203ENST00000360280 VCLP18206 1134 aa9.61□□□□□ -0.87
VPS13A-203ENST00000360280 CCDC157Q569K6 752 aa9.61□□□□□ -0.87
VPS13A-203ENST00000360280 TMEM63BQ5T3F8 832 aa9.61□□□□□ -0.87
VPS13A-203ENST00000360280 MZT2AQ6P582 158 aa9.61□□□□□ -0.87
VPS13A-203ENST00000360280 NAT9Q9BTE0 207 aa9.61□□□□□ -0.87
VPS13A-203ENST00000360280 KLHL28Q9NXS3 571 aa9.61□□□□□ -0.87
VPS13A-203ENST00000360280 CD3EAPO15446 510 aaKnown RBP9.61□□□□□ -0.87
VPS13A-203ENST00000360280 P4HBP07237 508 aaKnown RBP9.61□□□□□ -0.87
VPS13A-203ENST00000360280 ANXA6P08133 673 aa9.61□□□□□ -0.87
VPS13A-203ENST00000360280 CHRM3P20309 590 aa9.61□□□□□ -0.87
VPS13A-203ENST00000360280 CCNG1P51959 295 aa9.61□□□□□ -0.87
VPS13A-203ENST00000360280 SLC29A2Q14542 456 aa9.61□□□□□ -0.87
VPS13A-203ENST00000360280 CCDC153Q494R4 210 aa9.61□□□□□ -0.87
VPS13A-203ENST00000360280 SLC22A9Q8IVM8 553 aa9.61□□□□□ -0.87
VPS13A-203ENST00000360280 CCDC59Q9P031 241 aaKnown RBP9.61□□□□□ -0.87
VPS13A-203ENST00000360280 POTECB2RU33 542 aa9.61□□□□□ -0.87
VPS13A-203ENST00000360280 FAM200BP0CF97 657 aa9.61□□□□□ -0.87
VPS13A-203ENST00000360280 S100GP29377 79 aa9.61□□□□□ -0.87
VPS13A-203ENST00000360280 BNC1Q01954 994 aa9.61□□□□□ -0.87
VPS13A-203ENST00000360280 FUT11Q495W5 492 aa9.61□□□□□ -0.87
VPS13A-203ENST00000360280 IL31Q6EBC2 164 aa9.61□□□□□ -0.87
VPS13A-203ENST00000360280 OSCP1Q8WVF1 389 aa9.61□□□□□ -0.87
VPS13A-203ENST00000360280 HAO1Q9UJM8 370 aa9.61□□□□□ -0.87
VPS13A-203ENST00000360280 USP17L3A6NCW0 530 aa9.61□□□□□ -0.87
VPS13A-203ENST00000360280 USP17L4A6NCW7 530 aa9.61□□□□□ -0.87
VPS13A-203ENST00000360280 TKTP29401 623 aaKnown RBP9.61□□□□□ -0.87
VPS13A-203ENST00000360280 IFNGR2P38484 337 aa9.61□□□□□ -0.87
VPS13A-203ENST00000360280 ZRANB3Q5FWF4 1079 aa9.61□□□□□ -0.87
VPS13A-203ENST00000360280 EFHC1Q5JVL4 640 aa9.61□□□□□ -0.87
VPS13A-203ENST00000360280 USP17L1Q7RTZ2 530 aa9.61□□□□□ -0.87
VPS13A-203ENST00000360280 COMMD2Q86X83 199 aa9.61□□□□□ -0.87
VPS13A-203ENST00000360280 USP38Q8NB14 1042 aa9.61□□□□□ -0.87
VPS13A-203ENST00000360280 USP27XA6NNY8 438 aa9.61□□□□□ -0.87
VPS13A-203ENST00000360280 ALOX12P18054 663 aa9.61□□□□□ -0.87
VPS13A-203ENST00000360280 POU1F1P28069 291 aa9.61□□□□□ -0.87
VPS13A-203ENST00000360280 ZBTB49Q6ZSB9 765 aa9.61□□□□□ -0.87
VPS13A-203ENST00000360280 EPB42P16452 691 aa9.61□□□□□ -0.87
VPS13A-203ENST00000360280 IL5RAQ01344 420 aa9.61□□□□□ -0.87
VPS13A-203ENST00000360280 ANXA9O76027 345 aa9.61□□□□□ -0.87
VPS13A-203ENST00000360280 MROH9Q5TGP6 573 aa9.61□□□□□ -0.87
VPS13A-203ENST00000360280 HAVCR1Q96D42 359 aa9.61□□□□□ -0.87
VPS13A-203ENST00000360280 KIF12Q96FN5 646 aa9.61□□□□□ -0.87
VPS13A-203ENST00000360280 RMI1Q9H9A7 625 aa9.61□□□□□ -0.87
VPS13A-203ENST00000360280 MCM8Q9UJA3 840 aa9.61□□□□□ -0.87
VPS13A-203ENST00000360280 STOML2Q9UJZ1 356 aa9.61□□□□□ -0.87
VPS13A-203ENST00000360280 FAM92AA1XBS5 289 aa9.61□□□□□ -0.87
VPS13A-203ENST00000360280 BAIAP3O94812 1187 aa9.61□□□□□ -0.87
VPS13A-203ENST00000360280 MRNIPQ6NTE8 343 aa9.61□□□□□ -0.87
VPS13A-203ENST00000360280 A0A1W2PQJ5 194 aa9.6□□□□□ -0.87
VPS13A-203ENST00000360280 ATP5BP06576 529 aaKnown RBP9.6□□□□□ -0.87
VPS13A-203ENST00000360280 PDGFRAP16234 1089 aa9.6□□□□□ -0.87
VPS13A-203ENST00000360280 STARP49675 285 aa9.6□□□□□ -0.87
VPS13A-203ENST00000360280 ILF2Q12905 390 aaKnown RBP9.6□□□□□ -0.87
VPS13A-203ENST00000360280 TXNRD1Q16881 649 aa9.6□□□□□ -0.87
VPS13A-203ENST00000360280 NSUN6Q8TEA1 469 aaKnown RBP9.6□□□□□ -0.87
VPS13A-203ENST00000360280 ATP6V1HQ9UI12 483 aa9.6□□□□□ -0.87
VPS13A-203ENST00000360280 PSMD12O00232 456 aaPredicted RBP9.6□□□□□ -0.87
VPS13A-203ENST00000360280 GPR1P46091 355 aa9.6□□□□□ -0.87
VPS13A-203ENST00000360280 PSMC5P62195 406 aa9.6□□□□□ -0.87
VPS13A-203ENST00000360280 PADI4Q9UM07 663 aa9.6□□□□□ -0.87
VPS13A-203ENST00000360280 TMEM114B3SHH9 223 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms