RNA–Protein interactions for RNA: ENST00000358771.4

SIRPA-202, Transcript of signal regulatory protein alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIRPA, Length 3,996 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-202ENST00000358771 PIK3R5Q8WYR1 880 aa14.88□□□□□ -0.03
SIRPA-202ENST00000358771 DDX27Q96GQ7 796 aaKnown RBP14.88□□□□□ -0.03
SIRPA-202ENST00000358771 CNPY3Q9BT09 278 aa14.88□□□□□ -0.03
SIRPA-202ENST00000358771 VPS11Q9H270 941 aa14.88□□□□□ -0.03
SIRPA-202ENST00000358771 KIF9Q9HAQ2 790 aa14.88□□□□□ -0.03
SIRPA-202ENST00000358771 ECM29Q5VYK3 1845 aa14.88□□□□□ -0.03
SIRPA-202ENST00000358771 LAMB1P07942 1786 aa14.87□□□□□ -0.03
SIRPA-202ENST00000358771 TAF12Q16514 161 aa14.87□□□□□ -0.03
SIRPA-202ENST00000358771 SCYL1Q96KG9 808 aa14.87□□□□□ -0.03
SIRPA-202ENST00000358771 TNIP3Q96KP6 325 aa14.87□□□□□ -0.03
SIRPA-202ENST00000358771 ZNF560Q96MR9 790 aa14.87□□□□□ -0.03
SIRPA-202ENST00000358771 PARK7Q99497 189 aaKnown RBP14.87□□□□□ -0.03
SIRPA-202ENST00000358771 NIFKQ9BYG3 293 aaKnown RBP14.87□□□□□ -0.03
SIRPA-202ENST00000358771 RBPJLQ9UBG7 517 aa14.87□□□□□ -0.03
SIRPA-202ENST00000358771 ARL2BPQ9Y2Y0 163 aa14.87□□□□□ -0.03
SIRPA-202ENST00000358771 TMEM191CA6NGB0 347 aa14.87□□□□□ -0.03
SIRPA-202ENST00000358771 ARHGAP42A6NI28 874 aa14.87□□□□□ -0.03
SIRPA-202ENST00000358771 SRGAP2BP0DMP2 458 aa14.87□□□□□ -0.03
SIRPA-202ENST00000358771 ZDHHC24Q6UX98 284 aa14.87□□□□□ -0.03
SIRPA-202ENST00000358771 C1orf127Q8N9H9 656 aa14.87□□□□□ -0.03
SIRPA-202ENST00000358771 RSRC1Q96IZ7 334 aaKnown RBP14.87□□□□□ -0.03
SIRPA-202ENST00000358771 STAP1Q9ULZ2 295 aa14.87□□□□□ -0.03
SIRPA-202ENST00000358771 EIF4E1BA6NMX2 242 aaKnown RBP14.87□□□□□ -0.03
SIRPA-202ENST00000358771 LIASO43766 372 aa14.87□□□□□ -0.03
SIRPA-202ENST00000358771 GEN1Q17RS7 908 aa14.87□□□□□ -0.03
SIRPA-202ENST00000358771 MROH9Q5TGP6 573 aa14.87□□□□□ -0.03
SIRPA-202ENST00000358771 PACS2Q86VP3 889 aa14.87□□□□□ -0.03
SIRPA-202ENST00000358771 HASPINQ8TF76 798 aa14.87□□□□□ -0.03
SIRPA-202ENST00000358771 PGBD4Q96DM1 585 aa14.87□□□□□ -0.03
SIRPA-202ENST00000358771 TRIM55Q9BYV6 548 aa14.87□□□□□ -0.03
SIRPA-202ENST00000358771 TNFSF13BQ9Y275 285 aa14.87□□□□□ -0.03
SIRPA-202ENST00000358771 MSCO60682 206 aa14.86□□□□□ -0.03
SIRPA-202ENST00000358771 MCF2P10911 925 aa14.86□□□□□ -0.03
SIRPA-202ENST00000358771 CLNS1AP54105 237 aaKnown RBP14.86□□□□□ -0.03
SIRPA-202ENST00000358771 RFX8Q6ZV50 586 aa14.86□□□□□ -0.03
SIRPA-202ENST00000358771 PLEKHH3Q7Z736 793 aa14.86□□□□□ -0.03
SIRPA-202ENST00000358771 ADAM32Q8TC27 787 aa14.86□□□□□ -0.03
SIRPA-202ENST00000358771 AGR3Q8TD06 166 aa14.86□□□□□ -0.03
SIRPA-202ENST00000358771 B3GNT5Q9BYG0 378 aa14.86□□□□□ -0.03
SIRPA-202ENST00000358771 FNDC3AQ9Y2H6 1198 aaKnown RBP14.86□□□□□ -0.03
SIRPA-202ENST00000358771 CD48P09326 243 aa14.86□□□□□ -0.03
SIRPA-202ENST00000358771 CCDC130P13994 396 aa14.86□□□□□ -0.03
SIRPA-202ENST00000358771 NRLP54845 237 aa14.86□□□□□ -0.03
SIRPA-202ENST00000358771 ZNF200P98182 395 aaPredicted RBP14.86□□□□□ -0.03
SIRPA-202ENST00000358771 BOLA3Q53S33 107 aa14.86□□□□□ -0.03
SIRPA-202ENST00000358771 PLEKHA7Q6IQ23 1121 aa14.86□□□□□ -0.03
SIRPA-202ENST00000358771 SLC40A1Q9NP59 571 aa14.86□□□□□ -0.03
SIRPA-202ENST00000358771 PPARGC1AQ9UBK2 798 aaKnown RBP14.86□□□□□ -0.03
SIRPA-202ENST00000358771 KRT38O76015 456 aa14.86□□□□□ -0.03
SIRPA-202ENST00000358771 KDELR1P24390 212 aa14.86□□□□□ -0.03
SIRPA-202ENST00000358771 HNRNPH1P31943 449 aaKnown RBP14.86□□□□□ -0.03
SIRPA-202ENST00000358771 ICAM3P32942 547 aa14.86□□□□□ -0.03
SIRPA-202ENST00000358771 FASTKD3Q14CZ7 662 aaKnown RBP14.86□□□□□ -0.03
SIRPA-202ENST00000358771 TAF5Q15542 800 aa14.86□□□□□ -0.03
SIRPA-202ENST00000358771 CRELD2Q6UXH1 353 aaPredicted RBP14.86□□□□□ -0.03
SIRPA-202ENST00000358771 SLC7A14Q8TBB6 771 aa14.86□□□□□ -0.03
SIRPA-202ENST00000358771 USP33Q8TEY7 942 aa14.86□□□□□ -0.03
SIRPA-202ENST00000358771 LENG1Q96BZ8 264 aaPredicted RBP14.86□□□□□ -0.03
SIRPA-202ENST00000358771 SGSM3Q96HU1 749 aa14.86□□□□□ -0.03
SIRPA-202ENST00000358771 STRA6Q9BX79 667 aa14.86□□□□□ -0.03
SIRPA-202ENST00000358771 PPP1R12CQ9BZL4 782 aa14.86□□□□□ -0.03
SIRPA-202ENST00000358771 ASB7Q9H672 318 aa14.86□□□□□ -0.03
SIRPA-202ENST00000358771 UBN1Q9NPG3 1134 aa14.86□□□□□ -0.03
SIRPA-202ENST00000358771 RECQL4O94761 1208 aa14.85□□□□□ -0.03
SIRPA-202ENST00000358771 NUDT17P0C025 328 aa14.85□□□□□ -0.03
SIRPA-202ENST00000358771 GEMIN4P57678 1058 aaKnown RBP14.85□□□□□ -0.03
SIRPA-202ENST00000358771 PPIL2Q13356 520 aa14.85□□□□□ -0.03
SIRPA-202ENST00000358771 MORF4L2Q15014 288 aa14.85□□□□□ -0.03
SIRPA-202ENST00000358771 MDH1BQ5I0G3 518 aa14.85□□□□□ -0.03
SIRPA-202ENST00000358771 EFHC2Q5JST6 749 aa14.85□□□□□ -0.03
SIRPA-202ENST00000358771 PLPPR4Q7Z2D5 763 aa14.85□□□□□ -0.03
SIRPA-202ENST00000358771 METTL23Q86XA0 190 aa14.85□□□□□ -0.03
SIRPA-202ENST00000358771 TTC39CQ8N584 583 aa14.85□□□□□ -0.03
SIRPA-202ENST00000358771 KCNV2Q8TDN2 545 aa14.85□□□□□ -0.03
SIRPA-202ENST00000358771 PPP4R1Q8TF05 950 aa14.85□□□□□ -0.03
SIRPA-202ENST00000358771 FAM193BQ96PV7 902 aaPredicted RBP14.85□□□□□ -0.03
SIRPA-202ENST00000358771 FAM111AQ96PZ2 611 aa14.85□□□□□ -0.03
SIRPA-202ENST00000358771 PAFAH2Q99487 392 aa14.85□□□□□ -0.03
SIRPA-202ENST00000358771 PCMTD2Q9NV79 361 aa14.85□□□□□ -0.03
SIRPA-202ENST00000358771 CPSF3Q9UKF6 684 aaKnown RBP14.85□□□□□ -0.03
SIRPA-202ENST00000358771 MAST2Q6P0Q8 1798 aa14.85□□□□□ -0.03
SIRPA-202ENST00000358771 KAT6AQ92794 2004 aa14.85□□□□□ -0.03
SIRPA-202ENST00000358771 LAMB2P55268 1798 aa14.85□□□□□ -0.03
SIRPA-202ENST00000358771 SPDYE5A6NIY4 337 aa14.85□□□□□ -0.03
SIRPA-202ENST00000358771 UBOX5O94941 541 aa14.85□□□□□ -0.03
SIRPA-202ENST00000358771 SLC4A1P02730 911 aa14.85□□□□□ -0.03
SIRPA-202ENST00000358771 ELK3P41970 407 aa14.85□□□□□ -0.03
SIRPA-202ENST00000358771 PCDH9Q9HC56 1237 aa14.85□□□□□ -0.03
SIRPA-202ENST00000358771 HMGXB4Q9UGU5 601 aa14.85□□□□□ -0.03
SIRPA-202ENST00000358771 COL5A3P25940 1745 aaPredicted RBP14.85□□□□□ -0.03
SIRPA-202ENST00000358771 TRIM49D1C9J1S8 452 aa14.85□□□□□ -0.03
SIRPA-202ENST00000358771 M0QYT0 321 aa14.85□□□□□ -0.03
SIRPA-202ENST00000358771 CSPG5O95196 566 aa14.85□□□□□ -0.03
SIRPA-202ENST00000358771 CYP1A1P04798 512 aaPredicted RBP14.85□□□□□ -0.03
SIRPA-202ENST00000358771 GNAT1P11488 350 aa14.85□□□□□ -0.03
SIRPA-202ENST00000358771 ACO1P21399 889 aaKnown RBP14.85□□□□□ -0.03
SIRPA-202ENST00000358771 SCTRP47872 440 aa14.85□□□□□ -0.03
SIRPA-202ENST00000358771 GTF2A2P52657 109 aa14.85□□□□□ -0.03
SIRPA-202ENST00000358771 SLC12A2P55011 1212 aa14.85□□□□□ -0.03
SIRPA-202ENST00000358771 ACVR2BQ13705 512 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms