RNA–Protein interactions for RNA: ENST00000358064.3

HIST4H4-201, Transcript of histone cluster 4 H4, humanhuman

TSL 1 (best)

Gene HIST4H4, Length 1,918 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIST4H4-201ENST00000358064 CFAP157Q5JU67 520 aa11.35□□□□□ -0.59
HIST4H4-201ENST00000358064 C6orf118Q5T5N4 469 aa11.35□□□□□ -0.59
HIST4H4-201ENST00000358064 C10orf62Q5T681 223 aaPredicted RBP11.35□□□□□ -0.59
HIST4H4-201ENST00000358064 NFRKBQ6P4R8 1299 aa11.35□□□□□ -0.59
HIST4H4-201ENST00000358064 C1orf186Q6ZWK4 172 aa11.35□□□□□ -0.59
HIST4H4-201ENST00000358064 C7orf31Q8N865 590 aa11.35□□□□□ -0.59
HIST4H4-201ENST00000358064 CCDC42Q96M95 316 aa11.35□□□□□ -0.59
HIST4H4-201ENST00000358064 CEP63Q96MT8 703 aa11.35□□□□□ -0.59
HIST4H4-201ENST00000358064 NUDCD1Q96RS6 583 aa11.35□□□□□ -0.59
HIST4H4-201ENST00000358064 ELAC2Q9BQ52 826 aaKnown RBP11.35□□□□□ -0.59
HIST4H4-201ENST00000358064 REEP2Q9BRK0 252 aa11.35□□□□□ -0.59
HIST4H4-201ENST00000358064 TMEM109Q9BVC6 243 aa11.35□□□□□ -0.59
HIST4H4-201ENST00000358064 POLD4Q9HCU8 107 aa11.35□□□□□ -0.59
HIST4H4-201ENST00000358064 PDLIM7Q9NR12 457 aa11.35□□□□□ -0.59
HIST4H4-201ENST00000358064 TRMT13Q9NUP7 481 aaKnown RBP11.35□□□□□ -0.59
HIST4H4-201ENST00000358064 TMEM39AQ9NV64 488 aa11.35□□□□□ -0.59
HIST4H4-201ENST00000358064 DDX43Q9NXZ2 648 aaKnown RBP11.35□□□□□ -0.59
HIST4H4-201ENST00000358064 PTTG2Q9NZH5 202 aa11.35□□□□□ -0.59
HIST4H4-201ENST00000358064 KCND2Q9NZV8 630 aa11.35□□□□□ -0.59
HIST4H4-201ENST00000358064 CNOT8Q9UFF9 292 aaKnown RBP11.35□□□□□ -0.59
HIST4H4-201ENST00000358064 SCINQ9Y6U3 715 aa11.35□□□□□ -0.59
HIST4H4-201ENST00000358064 SCN10AQ9Y5Y9 1956 aa11.34□□□□□ -0.59
HIST4H4-201ENST00000358064 SMAPO00193 183 aa11.34□□□□□ -0.59
HIST4H4-201ENST00000358064 TLR3O15455 904 aaKnown RBP11.34□□□□□ -0.59
HIST4H4-201ENST00000358064 B4GALT4O60513 344 aa11.34□□□□□ -0.59
HIST4H4-201ENST00000358064 RPN1P04843 607 aaKnown RBP11.34□□□□□ -0.59
HIST4H4-201ENST00000358064 ITGA2BP08514 1039 aa11.34□□□□□ -0.59
HIST4H4-201ENST00000358064 NUDT17P0C025 328 aa11.34□□□□□ -0.59
HIST4H4-201ENST00000358064 INSRRP14616 1297 aa11.34□□□□□ -0.59
HIST4H4-201ENST00000358064 MATR3P43243 847 aaKnown RBP eCLIP11.34□□□□□ -0.59
HIST4H4-201ENST00000358064 POLGP54098 1239 aaPredicted RBP11.34□□□□□ -0.59
HIST4H4-201ENST00000358064 PAK1Q13153 545 aa11.34□□□□□ -0.59
HIST4H4-201ENST00000358064 GIT2Q14161 759 aa11.34□□□□□ -0.59
HIST4H4-201ENST00000358064 HLTFQ14527 1009 aaKnown RBP eCLIP11.34□□□□□ -0.59
HIST4H4-201ENST00000358064 KRT72Q14CN4 511 aa11.34□□□□□ -0.59
HIST4H4-201ENST00000358064 WDR59Q6PJI9 974 aa11.34□□□□□ -0.59
HIST4H4-201ENST00000358064 OLFML1Q6UWY5 402 aa11.34□□□□□ -0.59
HIST4H4-201ENST00000358064 C3orf62Q6ZUJ4 267 aa11.34□□□□□ -0.59
HIST4H4-201ENST00000358064 CROCCP3Q8IVE0 287 aa11.34□□□□□ -0.59
HIST4H4-201ENST00000358064 LRRC34Q8IZ02 419 aa11.34□□□□□ -0.59
HIST4H4-201ENST00000358064 ST13P4Q8IZP2 240 aaPredicted RBP11.34□□□□□ -0.59
HIST4H4-201ENST00000358064 TRAPPC12Q8WVT3 735 aa11.34□□□□□ -0.59
HIST4H4-201ENST00000358064 DNAJC19Q96DA6 116 aa11.34□□□□□ -0.59
HIST4H4-201ENST00000358064 SEZ6LQ9BYH1 1024 aa11.34□□□□□ -0.59
HIST4H4-201ENST00000358064 ZHX3Q9H4I2 956 aa11.34□□□□□ -0.59
HIST4H4-201ENST00000358064 MAP10Q9P2G4 905 aa11.34□□□□□ -0.59
HIST4H4-201ENST00000358064 MAPK8IP1Q9UQF2 711 aa11.34□□□□□ -0.59
HIST4H4-201ENST00000358064 SSX2IPQ9Y2D8 614 aa11.34□□□□□ -0.59
HIST4H4-201ENST00000358064 STK38LQ9Y2H1 464 aa11.34□□□□□ -0.59
HIST4H4-201ENST00000358064 USP20Q9Y2K6 914 aa11.34□□□□□ -0.59
HIST4H4-201ENST00000358064 TRIM43BA6NCK2 446 aa11.33□□□□□ -0.6
HIST4H4-201ENST00000358064 TMEM247A6NEH6 219 aa11.33□□□□□ -0.6
HIST4H4-201ENST00000358064 TBCAO75347 108 aaKnown RBP11.33□□□□□ -0.6
HIST4H4-201ENST00000358064 DGAT1O75907 488 aa11.33□□□□□ -0.6
HIST4H4-201ENST00000358064 EIF2S1P05198 315 aaKnown RBP11.33□□□□□ -0.6
HIST4H4-201ENST00000358064 PABPC4LP0CB38 370 aaKnown RBP11.33□□□□□ -0.6
HIST4H4-201ENST00000358064 CHN1P15882 459 aa11.33□□□□□ -0.6
HIST4H4-201ENST00000358064 ALOX15P16050 662 aaPredicted RBP11.33□□□□□ -0.6
HIST4H4-201ENST00000358064 NAT1P18440 290 aa11.33□□□□□ -0.6
HIST4H4-201ENST00000358064 TRIM21P19474 475 aaKnown RBP11.33□□□□□ -0.6
HIST4H4-201ENST00000358064 PTDSS1P48651 473 aaKnown RBP11.33□□□□□ -0.6
HIST4H4-201ENST00000358064 HDAC4P56524 1084 aa11.33□□□□□ -0.6
HIST4H4-201ENST00000358064 RPL26P61254 145 aaKnown RBP11.33□□□□□ -0.6
HIST4H4-201ENST00000358064 TARBP2Q15633 366 aaKnown RBP11.33□□□□□ -0.6
HIST4H4-201ENST00000358064 LIN52Q52LA3 116 aa11.33□□□□□ -0.6
HIST4H4-201ENST00000358064 ALKBH2Q6NS38 261 aa11.33□□□□□ -0.6
HIST4H4-201ENST00000358064 EXOC3L1Q86VI1 746 aa11.33□□□□□ -0.6
HIST4H4-201ENST00000358064 LRRC8CQ8TDW0 803 aa11.33□□□□□ -0.6
HIST4H4-201ENST00000358064 SLC7A3Q8WY07 619 aa11.33□□□□□ -0.6
HIST4H4-201ENST00000358064 PRCCQ92733 491 aaPredicted RBP11.33□□□□□ -0.6
HIST4H4-201ENST00000358064 TRIM43Q96BQ3 446 aaPredicted RBP11.33□□□□□ -0.6
HIST4H4-201ENST00000358064 DHRS1Q96LJ7 313 aa11.33□□□□□ -0.6
HIST4H4-201ENST00000358064 CGREF1Q99674 301 aa11.33□□□□□ -0.6
HIST4H4-201ENST00000358064 TUBB6Q9BUF5 446 aa11.33□□□□□ -0.6
HIST4H4-201ENST00000358064 IFIH1Q9BYX4 1025 aaKnown RBP11.33□□□□□ -0.6
HIST4H4-201ENST00000358064 LACRTQ9GZZ8 138 aa11.33□□□□□ -0.6
HIST4H4-201ENST00000358064 ZCWPW1Q9H0M4 648 aa11.33□□□□□ -0.6
HIST4H4-201ENST00000358064 ABCF3Q9NUQ8 709 aa11.33□□□□□ -0.6
HIST4H4-201ENST00000358064 INTUQ9ULD6 942 aa11.33□□□□□ -0.6
HIST4H4-201ENST00000358064 ARID2Q68CP9 1835 aa11.33□□□□□ -0.6
HIST4H4-201ENST00000358064 RSPH10B2B2RC85 870 aa11.33□□□□□ -0.6
HIST4H4-201ENST00000358064 ZBTB42B2RXF5 422 aa11.33□□□□□ -0.6
HIST4H4-201ENST00000358064 HAS3O00219 553 aa11.33□□□□□ -0.6
HIST4H4-201ENST00000358064 KLRC4O43908 158 aa11.33□□□□□ -0.6
HIST4H4-201ENST00000358064 F12P00748 615 aaPredicted RBP11.33□□□□□ -0.6
HIST4H4-201ENST00000358064 CD4P01730 458 aa11.33□□□□□ -0.6
HIST4H4-201ENST00000358064 RSPH10BP0C881 870 aa11.33□□□□□ -0.6
HIST4H4-201ENST00000358064 CD44P16070 742 aaKnown RBP11.33□□□□□ -0.6
HIST4H4-201ENST00000358064 POU3F3P20264 500 aaPredicted RBP11.33□□□□□ -0.6
HIST4H4-201ENST00000358064 ATP5DP30049 168 aa11.33□□□□□ -0.6
HIST4H4-201ENST00000358064 PPP1R2P41236 205 aa11.33□□□□□ -0.6
HIST4H4-201ENST00000358064 HPCAP84074 193 aa11.33□□□□□ -0.6
HIST4H4-201ENST00000358064 SQSTM1Q13501 440 aa11.33□□□□□ -0.6
HIST4H4-201ENST00000358064 RCN2Q14257 317 aa11.33□□□□□ -0.6
HIST4H4-201ENST00000358064 EMC2Q15006 297 aa11.33□□□□□ -0.6
HIST4H4-201ENST00000358064 CCDC153Q494R4 210 aa11.33□□□□□ -0.6
HIST4H4-201ENST00000358064 PDCD4Q53EL6 469 aaKnown RBP11.33□□□□□ -0.6
HIST4H4-201ENST00000358064 FAM102BQ5T8I3 360 aa11.33□□□□□ -0.6
HIST4H4-201ENST00000358064 MEI1Q5TIA1 1274 aa11.33□□□□□ -0.6
HIST4H4-201ENST00000358064 CNNM4Q6P4Q7 775 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms