RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 HERC5Q9UII4 1024 aaKnown RBP13.81□□□□□ -0.2
IFT88-202ENST00000351808 IVNS1ABPQ9Y6Y0 642 aa13.81□□□□□ -0.2
IFT88-202ENST00000351808 SPATA31A1Q5TZJ5 1347 aa13.81□□□□□ -0.2
IFT88-202ENST00000351808 MEGF6O75095 1541 aa13.81□□□□□ -0.2
IFT88-202ENST00000351808 CCDC162PA2VCL2 907 aa13.81□□□□□ -0.2
IFT88-202ENST00000351808 DNALI1O14645 258 aaPredicted RBP13.81□□□□□ -0.2
IFT88-202ENST00000351808 DGKIO75912 1065 aa13.81□□□□□ -0.2
IFT88-202ENST00000351808 GCNT3O95395 438 aa13.81□□□□□ -0.2
IFT88-202ENST00000351808 MT-ND3P03897 115 aa13.81□□□□□ -0.2
IFT88-202ENST00000351808 HMOX2P30519 316 aa13.81□□□□□ -0.2
IFT88-202ENST00000351808 MTM1Q13496 603 aa13.81□□□□□ -0.2
IFT88-202ENST00000351808 ZNF829Q3KNS6 432 aaPredicted RBP13.81□□□□□ -0.2
IFT88-202ENST00000351808 EGFLAMQ63HQ2 1017 aa13.81□□□□□ -0.2
IFT88-202ENST00000351808 NIPAL1Q6NVV3 410 aa13.81□□□□□ -0.2
IFT88-202ENST00000351808 ADGRD1Q6QNK2 874 aa13.81□□□□□ -0.2
IFT88-202ENST00000351808 ZFPM1Q8IX07 1006 aa13.81□□□□□ -0.2
IFT88-202ENST00000351808 LARGE2Q8N3Y3 721 aa13.81□□□□□ -0.2
IFT88-202ENST00000351808 IGSF9Q9P2J2 1179 aa13.81□□□□□ -0.2
IFT88-202ENST00000351808 VPS51Q9UID3 782 aa13.81□□□□□ -0.2
IFT88-202ENST00000351808 PACSIN3Q9UKS6 424 aa13.81□□□□□ -0.2
IFT88-202ENST00000351808 SF3B1O75533 1304 aaKnown RBP eCLIP13.81□□□□□ -0.2
IFT88-202ENST00000351808 CCDC195A0A1B0GUA6 201 aa13.8□□□□□ -0.2
IFT88-202ENST00000351808 SGPL1O95470 568 aa13.8□□□□□ -0.2
IFT88-202ENST00000351808 SLC1A1P43005 524 aa13.8□□□□□ -0.2
IFT88-202ENST00000351808 KCNQ4P56696 695 aa13.8□□□□□ -0.2
IFT88-202ENST00000351808 BST1Q10588 318 aa13.8□□□□□ -0.2
IFT88-202ENST00000351808 CYP2A13Q16696 494 aa13.8□□□□□ -0.2
IFT88-202ENST00000351808 DCLRE1AQ6PJP8 1040 aa13.8□□□□□ -0.2
IFT88-202ENST00000351808 POTEGQ6S5H5 508 aa13.8□□□□□ -0.2
IFT88-202ENST00000351808 RAVER1Q8IY67 606 aaKnown RBP13.8□□□□□ -0.2
IFT88-202ENST00000351808 ALKBH8Q96BT7 664 aaKnown RBP13.8□□□□□ -0.2
IFT88-202ENST00000351808 DYNLL2Q96FJ2 89 aa13.8□□□□□ -0.2
IFT88-202ENST00000351808 HAUS8Q9BT25 410 aa13.8□□□□□ -0.2
IFT88-202ENST00000351808 ANLNQ9NQW6 1124 aa13.8□□□□□ -0.2
IFT88-202ENST00000351808 I3L4J1 428 aa13.8□□□□□ -0.2
IFT88-202ENST00000351808 CLUHO75153 1309 aa13.8□□□□□ -0.2
IFT88-202ENST00000351808 COL1A1P02452 1464 aaPredicted RBP13.8□□□□□ -0.2
IFT88-202ENST00000351808 PSMC2P35998 433 aaKnown RBP13.8□□□□□ -0.2
IFT88-202ENST00000351808 ALDH3B2P48448 385 aa13.8□□□□□ -0.2
IFT88-202ENST00000351808 SLC12A3P55017 1021 aa13.8□□□□□ -0.2
IFT88-202ENST00000351808 PSMC6P62333 389 aa13.8□□□□□ -0.2
IFT88-202ENST00000351808 TMPRSS15P98073 1019 aa13.8□□□□□ -0.2
IFT88-202ENST00000351808 CENPCQ03188 943 aa13.8□□□□□ -0.2
IFT88-202ENST00000351808 PEX6Q13608 980 aa13.8□□□□□ -0.2
IFT88-202ENST00000351808 ANKRD36CQ5JPF3 1778 aa13.8□□□□□ -0.2
IFT88-202ENST00000351808 SPOPLQ6IQ16 392 aa13.8□□□□□ -0.2
IFT88-202ENST00000351808 USP17L2Q6R6M4 530 aa13.8□□□□□ -0.2
IFT88-202ENST00000351808 CLVS1Q8IUQ0 354 aaPredicted RBP13.8□□□□□ -0.2
IFT88-202ENST00000351808 DEFB107AQ8IZN7 70 aa13.8□□□□□ -0.2
IFT88-202ENST00000351808 OGFOD1Q8N543 542 aa13.8□□□□□ -0.2
IFT88-202ENST00000351808 COA7Q96BR5 231 aa13.8□□□□□ -0.2
IFT88-202ENST00000351808 THAP11Q96EK4 314 aa13.8□□□□□ -0.2
IFT88-202ENST00000351808 SERAC1Q96JX3 654 aa13.8□□□□□ -0.2
IFT88-202ENST00000351808 LRGUKQ96M69 825 aa13.8□□□□□ -0.2
IFT88-202ENST00000351808 REEP2Q9BRK0 252 aa13.8□□□□□ -0.2
IFT88-202ENST00000351808 PADI4Q9UM07 663 aa13.8□□□□□ -0.2
IFT88-202ENST00000351808 PSMD13Q9UNM6 376 aa13.8□□□□□ -0.2
IFT88-202ENST00000351808 DENND3A2RUS2 1198 aa13.79□□□□□ -0.2
IFT88-202ENST00000351808 MEIS1O00470 390 aa13.79□□□□□ -0.2
IFT88-202ENST00000351808 PDE8AO60658 829 aa13.79□□□□□ -0.2
IFT88-202ENST00000351808 SERPINA6P08185 405 aa13.79□□□□□ -0.2
IFT88-202ENST00000351808 USP17L8P0C7I0 530 aa13.79□□□□□ -0.2
IFT88-202ENST00000351808 GPS1Q13098 491 aa13.79□□□□□ -0.2
IFT88-202ENST00000351808 CES4AQ5XG92 561 aa13.79□□□□□ -0.2
IFT88-202ENST00000351808 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.79□□□□□ -0.2
IFT88-202ENST00000351808 TMEM47Q9BQJ4 181 aa13.79□□□□□ -0.2
IFT88-202ENST00000351808 NUF2Q9BZD4 464 aa13.79□□□□□ -0.2
IFT88-202ENST00000351808 XPNPEP1Q9NQW7 623 aa13.79□□□□□ -0.2
IFT88-202ENST00000351808 GIN1Q9NXP7 522 aa13.79□□□□□ -0.2
IFT88-202ENST00000351808 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.79□□□□□ -0.29e-7■■■■□ 22.8
IFT88-202ENST00000351808 CNTN3Q9P232 1028 aa13.79□□□□□ -0.2
IFT88-202ENST00000351808 TBX22Q9Y458 520 aa13.79□□□□□ -0.2
IFT88-202ENST00000351808 COL22A1Q8NFW1 1626 aaPredicted RBP13.79□□□□□ -0.2
IFT88-202ENST00000351808 KDM3AQ9Y4C1 1321 aa13.79□□□□□ -0.2
IFT88-202ENST00000351808 DYTNA2CJ06 578 aa13.79□□□□□ -0.2
IFT88-202ENST00000351808 J3QRK9 145 aa13.79□□□□□ -0.2
IFT88-202ENST00000351808 MCF2LO15068 1137 aa13.79□□□□□ -0.2
IFT88-202ENST00000351808 TGFB1I1O43294 461 aa13.79□□□□□ -0.2
IFT88-202ENST00000351808 CYP1A2P05177 515 aa13.79□□□□□ -0.2
IFT88-202ENST00000351808 HOXA10P31260 410 aaPredicted RBP13.79□□□□□ -0.2
IFT88-202ENST00000351808 STAT3P40763 770 aa13.79□□□□□ -0.2
IFT88-202ENST00000351808 NDST2P52849 883 aa13.79□□□□□ -0.2
IFT88-202ENST00000351808 TBCCQ15814 346 aa13.79□□□□□ -0.2
IFT88-202ENST00000351808 CCDC142Q17RM4 750 aa13.79□□□□□ -0.2
IFT88-202ENST00000351808 HYIQ5T013 277 aa13.79□□□□□ -0.2
IFT88-202ENST00000351808 RARS2Q5T160 578 aaKnown RBP13.79□□□□□ -0.2
IFT88-202ENST00000351808 ZBTB46Q86UZ6 589 aa13.79□□□□□ -0.2
IFT88-202ENST00000351808 CHPT1Q8WUD6 406 aa13.79□□□□□ -0.2
IFT88-202ENST00000351808 TGFBRAP1Q8WUH2 860 aa13.79□□□□□ -0.2
IFT88-202ENST00000351808 FBXL8Q96CD0 374 aa13.79□□□□□ -0.2
IFT88-202ENST00000351808 TRIM56Q9BRZ2 755 aaKnown RBP13.79□□□□□ -0.2
IFT88-202ENST00000351808 ROBO3Q96MS0 1386 aa13.78□□□□□ -0.2
IFT88-202ENST00000351808 SFI1A8K8P3 1242 aa13.78□□□□□ -0.2
IFT88-202ENST00000351808 FAM47E-STBD1D6RA91 191 aa13.78□□□□□ -0.2
IFT88-202ENST00000351808 PSMD12O00232 456 aaPredicted RBP13.78□□□□□ -0.2
IFT88-202ENST00000351808 MED24O75448 989 aa13.78□□□□□ -0.2
IFT88-202ENST00000351808 BAIAP3O94812 1187 aa13.78□□□□□ -0.2
IFT88-202ENST00000351808 FDX1P10109 184 aa13.78□□□□□ -0.2
IFT88-202ENST00000351808 AOC1P19801 751 aa13.78□□□□□ -0.2
IFT88-202ENST00000351808 GYG1P46976 350 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms