RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 BBOX1O75936 387 aa10.09□□□□□ -0.79
HOXA1-201ENST00000343060 BAG2O95816 211 aa10.09□□□□□ -0.79
HOXA1-201ENST00000343060 CFBP00751 764 aa10.09□□□□□ -0.79
HOXA1-201ENST00000343060 CFHP08603 1231 aa10.09□□□□□ -0.79
HOXA1-201ENST00000343060 VCLP18206 1134 aa10.09□□□□□ -0.79
HOXA1-201ENST00000343060 CHN2P52757 468 aa10.09□□□□□ -0.79
HOXA1-201ENST00000343060 PEX3P56589 373 aa10.09□□□□□ -0.79
HOXA1-201ENST00000343060 USP46P62068 366 aa10.09□□□□□ -0.79
HOXA1-201ENST00000343060 BST1Q10588 318 aa10.09□□□□□ -0.79
HOXA1-201ENST00000343060 TTLL12Q14166 644 aaPredicted RBP10.09□□□□□ -0.79
HOXA1-201ENST00000343060 TAZQ16635 292 aa10.09□□□□□ -0.79
HOXA1-201ENST00000343060 CFAP157Q5JU67 520 aa10.09□□□□□ -0.79
HOXA1-201ENST00000343060 CES4AQ5XG92 561 aa10.09□□□□□ -0.79
HOXA1-201ENST00000343060 PGM2L1Q6PCE3 622 aa10.09□□□□□ -0.79
HOXA1-201ENST00000343060 PRPF39Q86UA1 669 aaKnown RBP10.09□□□□□ -0.79
HOXA1-201ENST00000343060 MIPOL1Q8TD10 442 aa10.09□□□□□ -0.79
HOXA1-201ENST00000343060 ELMO3Q96BJ8 720 aa10.09□□□□□ -0.79
HOXA1-201ENST00000343060 DGCR14Q96DF8 476 aaKnown RBP10.09□□□□□ -0.79
HOXA1-201ENST00000343060 PLEKHG4BQ96PX9 1271 aa10.09□□□□□ -0.79
HOXA1-201ENST00000343060 SRPK1Q96SB4 655 aaKnown RBP10.09□□□□□ -0.79
HOXA1-201ENST00000343060 KLHL4Q9C0H6 718 aa10.09□□□□□ -0.79
HOXA1-201ENST00000343060 ZNF180Q9UJW8 692 aa10.09□□□□□ -0.79
HOXA1-201ENST00000343060 HBS1LQ9Y450 684 aaKnown RBP10.09□□□□□ -0.79
HOXA1-201ENST00000343060 DHX15O43143 795 aaKnown RBP10.09□□□□□ -0.79
HOXA1-201ENST00000343060 COQ9O75208 318 aa10.09□□□□□ -0.79
HOXA1-201ENST00000343060 PIAS1O75925 651 aa10.09□□□□□ -0.79
HOXA1-201ENST00000343060 IFNB1P01574 187 aa10.09□□□□□ -0.79
HOXA1-201ENST00000343060 FAM200BP0CF97 657 aa10.09□□□□□ -0.79
HOXA1-201ENST00000343060 MMP8P22894 467 aa10.09□□□□□ -0.79
HOXA1-201ENST00000343060 RPL22P35268 128 aaKnown RBP10.09□□□□□ -0.79
HOXA1-201ENST00000343060 GDF10P55107 478 aa10.09□□□□□ -0.79
HOXA1-201ENST00000343060 ZNF200P98182 395 aaPredicted RBP10.09□□□□□ -0.79
HOXA1-201ENST00000343060 PDE1BQ01064 536 aa10.09□□□□□ -0.79
HOXA1-201ENST00000343060 WASHC5Q12768 1159 aa10.09□□□□□ -0.79
HOXA1-201ENST00000343060 CCNIQ14094 377 aa10.09□□□□□ -0.79
HOXA1-201ENST00000343060 PRR5LQ6MZQ0 368 aa10.09□□□□□ -0.79
HOXA1-201ENST00000343060 CDHR3Q6ZTQ4 885 aa10.09□□□□□ -0.79
HOXA1-201ENST00000343060 NIPA1Q7RTP0 329 aa10.09□□□□□ -0.79
HOXA1-201ENST00000343060 SATL1Q86VE3 508 aa10.09□□□□□ -0.79
HOXA1-201ENST00000343060 PALM2Q8IXS6 379 aa10.09□□□□□ -0.79
HOXA1-201ENST00000343060 PDIK1LQ8N165 341 aa10.09□□□□□ -0.79
HOXA1-201ENST00000343060 POMGNT1Q8WZA1 660 aa10.09□□□□□ -0.79
HOXA1-201ENST00000343060 SIKE1Q9BRV8 207 aa10.09□□□□□ -0.79
HOXA1-201ENST00000343060 RBM38Q9H0Z9 239 aaKnown RBP10.09□□□□□ -0.79
HOXA1-201ENST00000343060 DEFB129Q9H1M3 183 aa10.09□□□□□ -0.79
HOXA1-201ENST00000343060 GINM1Q9NU53 330 aa10.09□□□□□ -0.79
HOXA1-201ENST00000343060 PI4KBQ9UBF8 816 aa10.09□□□□□ -0.79
HOXA1-201ENST00000343060 PLLPQ9Y342 182 aa10.09□□□□□ -0.79
HOXA1-201ENST00000343060 NRXN2Q9P2S2 1712 aa10.09□□□□□ -0.79
HOXA1-201ENST00000343060 AHDC1Q5TGY3 1603 aaPredicted RBP10.09□□□□□ -0.79
HOXA1-201ENST00000343060 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.08□□□□□ -0.8
HOXA1-201ENST00000343060 TCRBV7S3A2A0A539 114 aa10.08□□□□□ -0.8
HOXA1-201ENST00000343060 TCRBV9S1A1TA0A576 114 aa10.08□□□□□ -0.8
HOXA1-201ENST00000343060 DDTLA6NHG4 134 aaPredicted RBP10.08□□□□□ -0.8
HOXA1-201ENST00000343060 SDR42E2A6NKP2 422 aa10.08□□□□□ -0.8
HOXA1-201ENST00000343060 PRR5-ARHGAP8B1AHC4 643 aa10.08□□□□□ -0.8
HOXA1-201ENST00000343060 COPEO14579 308 aa10.08□□□□□ -0.8
HOXA1-201ENST00000343060 VILLO15195 856 aa10.08□□□□□ -0.8
HOXA1-201ENST00000343060 STRNO43815 780 aa10.08□□□□□ -0.8
HOXA1-201ENST00000343060 OPHN1O60890 802 aa10.08□□□□□ -0.8
HOXA1-201ENST00000343060 NPM3O75607 178 aaKnown RBP10.08□□□□□ -0.8
HOXA1-201ENST00000343060 INHBAP08476 426 aa10.08□□□□□ -0.8
HOXA1-201ENST00000343060 AQP4P55087 323 aa10.08□□□□□ -0.8
HOXA1-201ENST00000343060 PSMC5P62195 406 aa10.08□□□□□ -0.8
HOXA1-201ENST00000343060 RPL7AP62424 266 aaKnown RBP10.08□□□□□ -0.8
HOXA1-201ENST00000343060 HPCAP84074 193 aa10.08□□□□□ -0.8
HOXA1-201ENST00000343060 ARHGAP8P85298 464 aa10.08□□□□□ -0.8
HOXA1-201ENST00000343060 KDSRQ06136 332 aa10.08□□□□□ -0.8
HOXA1-201ENST00000343060 HIC1Q14526 733 aa10.08□□□□□ -0.8
HOXA1-201ENST00000343060 PDK3Q15120 406 aa10.08□□□□□ -0.8
HOXA1-201ENST00000343060 DBN1Q16643 649 aa10.08□□□□□ -0.8
HOXA1-201ENST00000343060 ZACNQ401N2 412 aa10.08□□□□□ -0.8
HOXA1-201ENST00000343060 ANGEL2Q5VTE6 544 aaKnown RBP10.08□□□□□ -0.8
HOXA1-201ENST00000343060 SH3BP5LQ7L8J4 393 aa10.08□□□□□ -0.8
HOXA1-201ENST00000343060 POLNQ7Z5Q5 900 aa10.08□□□□□ -0.8
HOXA1-201ENST00000343060 ARID3BQ8IVW6 561 aaPredicted RBP10.08□□□□□ -0.8
HOXA1-201ENST00000343060 GSTCDQ8NEC7 633 aa10.08□□□□□ -0.8
HOXA1-201ENST00000343060 TEKT1Q969V4 418 aa10.08□□□□□ -0.8
HOXA1-201ENST00000343060 E2F7Q96AV8 911 aa10.08□□□□□ -0.8
HOXA1-201ENST00000343060 RBM17Q96I25 401 aaKnown RBP10.08□□□□□ -0.8
HOXA1-201ENST00000343060 STN1Q9H668 368 aaKnown RBP10.08□□□□□ -0.8
HOXA1-201ENST00000343060 GPRC5CQ9NQ84 441 aa10.08□□□□□ -0.8
HOXA1-201ENST00000343060 PLK2Q9NYY3 685 aa10.08□□□□□ -0.8
HOXA1-201ENST00000343060 ADAMTS6Q9UKP5 1117 aa10.08□□□□□ -0.8
HOXA1-201ENST00000343060 A0A0B4J269 797 aa10.08□□□□□ -0.8
HOXA1-201ENST00000343060 TTLL13PA6NNM8 815 aa10.08□□□□□ -0.8
HOXA1-201ENST00000343060 LGR5O75473 907 aa10.08□□□□□ -0.8
HOXA1-201ENST00000343060 ITGB5P18084 799 aa10.08□□□□□ -0.8
HOXA1-201ENST00000343060 GARTP22102 1010 aa10.08□□□□□ -0.8
HOXA1-201ENST00000343060 HOXA10P31260 410 aaPredicted RBP10.08□□□□□ -0.8
HOXA1-201ENST00000343060 QARSP47897 775 aaKnown RBP10.08□□□□□ -0.8
HOXA1-201ENST00000343060 UBXN2AP68543 259 aa10.08□□□□□ -0.8
HOXA1-201ENST00000343060 MRPS5P82675 430 aaKnown RBP10.08□□□□□ -0.8
HOXA1-201ENST00000343060 SULT2A1Q06520 285 aa10.08□□□□□ -0.8
HOXA1-201ENST00000343060 TBL3Q12788 808 aaKnown RBP10.08□□□□□ -0.8
HOXA1-201ENST00000343060 DLG1Q12959 904 aa10.08□□□□□ -0.8
HOXA1-201ENST00000343060 USP4Q13107 963 aa10.08□□□□□ -0.8
HOXA1-201ENST00000343060 TUBB3Q13509 450 aa10.08□□□□□ -0.8
HOXA1-201ENST00000343060 BBS9Q3SYG4 887 aa10.08□□□□□ -0.8
HOXA1-201ENST00000343060 KBTBD12Q3ZCT8 623 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms