RNA–Protein interactions for RNA: ENST00000341485.9

TPM3-208, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,063 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-208ENST00000341485 PIN4Q9Y237 131 aaKnown RBP15.79■□□□□ 0.12
TPM3-208ENST00000341485 CEP83Q9Y592 693 aa15.79■□□□□ 0.12
TPM3-208ENST00000341485 GOLGA8SH3BPF8 625 aa15.78■□□□□ 0.12
TPM3-208ENST00000341485 NFICP08651 508 aa15.78■□□□□ 0.12
TPM3-208ENST00000341485 KRT19P08727 400 aa15.78■□□□□ 0.12
TPM3-208ENST00000341485 CD19P15391 556 aa15.78■□□□□ 0.12
TPM3-208ENST00000341485 HOXA11P31270 313 aaPredicted RBP15.78■□□□□ 0.12
TPM3-208ENST00000341485 CDKN2BP42772 138 aa15.78■□□□□ 0.12
TPM3-208ENST00000341485 PRMT2P55345 433 aa15.78■□□□□ 0.12
TPM3-208ENST00000341485 MRPS6P82932 125 aaKnown RBP15.78■□□□□ 0.12
TPM3-208ENST00000341485 SPRED3Q2MJR0 410 aa15.78■□□□□ 0.12
TPM3-208ENST00000341485 JADE1Q6IE81 842 aa15.78■□□□□ 0.12
TPM3-208ENST00000341485 ZCCHC9Q8N567 271 aaKnown RBP15.78■□□□□ 0.12
TPM3-208ENST00000341485 ALLCQ8N6M5 410 aa15.78■□□□□ 0.12
TPM3-208ENST00000341485 C9orf72Q96LT7 481 aa15.78■□□□□ 0.12
TPM3-208ENST00000341485 BCO2Q9BYV7 579 aa15.78■□□□□ 0.12
TPM3-208ENST00000341485 DDX56Q9NY93 547 aaKnown RBP15.78■□□□□ 0.12
TPM3-208ENST00000341485 TRPV2Q9Y5S1 764 aa15.78■□□□□ 0.12
TPM3-208ENST00000341485 LRRD1A4D1F6 860 aa15.77■□□□□ 0.12
TPM3-208ENST00000341485 DNALI1O14645 258 aaPredicted RBP15.77■□□□□ 0.12
TPM3-208ENST00000341485 ETS1P14921 441 aa15.77■□□□□ 0.12
TPM3-208ENST00000341485 IFNAR2P48551 515 aa15.77■□□□□ 0.12
TPM3-208ENST00000341485 RAD23BP54727 409 aa15.77■□□□□ 0.12
TPM3-208ENST00000341485 CDH8P55286 799 aa15.77■□□□□ 0.12
TPM3-208ENST00000341485 ACTN3Q08043 901 aaPredicted RBP15.77■□□□□ 0.12
TPM3-208ENST00000341485 SLC10A6Q3KNW5 377 aa15.77■□□□□ 0.12
TPM3-208ENST00000341485 TFDP3Q5H9I0 405 aa15.77■□□□□ 0.12
TPM3-208ENST00000341485 FBXW10Q5XX13 1052 aa15.77■□□□□ 0.12
TPM3-208ENST00000341485 CCSAPQ6IQ19 270 aaPredicted RBP15.77■□□□□ 0.12
TPM3-208ENST00000341485 CYP4X1Q8N118 509 aa15.77■□□□□ 0.12
TPM3-208ENST00000341485 C1orf127Q8N9H9 656 aa15.77■□□□□ 0.12
TPM3-208ENST00000341485 JOSD2Q8TAC2 188 aa15.77■□□□□ 0.12
TPM3-208ENST00000341485 HAUS1Q96CS2 278 aa15.77■□□□□ 0.12
TPM3-208ENST00000341485 LHX5Q9H2C1 402 aa15.77■□□□□ 0.12
TPM3-208ENST00000341485 HMX1Q9NP08 348 aaPredicted RBP15.77■□□□□ 0.12
TPM3-208ENST00000341485 LGALS13Q9UHV8 139 aa15.77■□□□□ 0.12
TPM3-208ENST00000341485 ZNF148Q9UQR1 794 aa15.77■□□□□ 0.12
TPM3-208ENST00000341485 DRG1Q9Y295 367 aaKnown RBP15.77■□□□□ 0.12
TPM3-208ENST00000341485 CDY2AQ9Y6F7 541 aa15.77■□□□□ 0.12
TPM3-208ENST00000341485 TMEM120BA0PK00 339 aa15.77■□□□□ 0.11
TPM3-208ENST00000341485 C3orf70A6NLC5 250 aaPredicted RBP15.77■□□□□ 0.11
TPM3-208ENST00000341485 PSMA2P25787 234 aa15.77■□□□□ 0.11
TPM3-208ENST00000341485 ATP5DP30049 168 aa15.77■□□□□ 0.11
TPM3-208ENST00000341485 RFC1P35251 1148 aaPredicted RBP15.77■□□□□ 0.11
TPM3-208ENST00000341485 YARSP54577 528 aaKnown RBP15.77■□□□□ 0.11
TPM3-208ENST00000341485 VCPP55072 806 aaKnown RBP15.77■□□□□ 0.11
TPM3-208ENST00000341485 ORC1Q13415 861 aa15.77■□□□□ 0.11
TPM3-208ENST00000341485 TMEM132DQ14C87 1099 aa15.77■□□□□ 0.11
TPM3-208ENST00000341485 OASLQ15646 514 aaKnown RBP15.77■□□□□ 0.11
TPM3-208ENST00000341485 ZNF667Q5HYK9 610 aa15.77■□□□□ 0.11
TPM3-208ENST00000341485 SMYD5Q6GMV2 418 aa15.77■□□□□ 0.11
TPM3-208ENST00000341485 PIGWQ7Z7B1 504 aa15.77■□□□□ 0.11
TPM3-208ENST00000341485 SESTD1Q86VW0 696 aa15.77■□□□□ 0.11
TPM3-208ENST00000341485 ARFGAP1Q8N6T3 406 aa15.77■□□□□ 0.11
TPM3-208ENST00000341485 CCHCR1Q8TD31 782 aa15.77■□□□□ 0.11
TPM3-208ENST00000341485 RBM15Q96T37 977 aaKnown RBP eCLIP15.77■□□□□ 0.11
TPM3-208ENST00000341485 EIF2AQ9BY44 585 aaKnown RBP15.77■□□□□ 0.11
TPM3-208ENST00000341485 FOXP3Q9BZS1 431 aa15.77■□□□□ 0.11
TPM3-208ENST00000341485 SNTG2Q9NY99 539 aa15.77■□□□□ 0.11
TPM3-208ENST00000341485 STRIP2Q9ULQ0 834 aa15.77■□□□□ 0.11
TPM3-208ENST00000341485 SIGLEC16A6NMB1 481 aa15.76■□□□□ 0.11
TPM3-208ENST00000341485 CABYRO75952 493 aa15.76■□□□□ 0.11
TPM3-208ENST00000341485 RPLP2P05387 115 aaKnown RBP15.76■□□□□ 0.11
TPM3-208ENST00000341485 GRK4P32298 578 aa15.76■□□□□ 0.11
TPM3-208ENST00000341485 MAGEA4P43358 317 aa15.76■□□□□ 0.11
TPM3-208ENST00000341485 ARSEP51690 589 aa15.76■□□□□ 0.11
TPM3-208ENST00000341485 SLC25A11Q02978 314 aaKnown RBP15.76■□□□□ 0.11
TPM3-208ENST00000341485 WDR72Q3MJ13 1102 aa15.76■□□□□ 0.11
TPM3-208ENST00000341485 CNPY4Q8N129 248 aa15.76■□□□□ 0.11
TPM3-208ENST00000341485 CCDC197Q8NCU1 140 aa15.76■□□□□ 0.11
TPM3-208ENST00000341485 MGARPQ8TDB4 240 aa15.76■□□□□ 0.11
TPM3-208ENST00000341485 TWNKQ96RR1 684 aa15.76■□□□□ 0.11
TPM3-208ENST00000341485 SMYD3Q9H7B4 428 aa15.76■□□□□ 0.11
TPM3-208ENST00000341485 HMGXB4Q9UGU5 601 aa15.76■□□□□ 0.11
TPM3-208ENST00000341485 TRIM17Q9Y577 477 aa15.76■□□□□ 0.11
TPM3-208ENST00000341485 MED7O43513 233 aa15.75■□□□□ 0.11
TPM3-208ENST00000341485 CTSHP09668 335 aa15.75■□□□□ 0.11
TPM3-208ENST00000341485 IL1R2P27930 398 aa15.75■□□□□ 0.11
TPM3-208ENST00000341485 POLR2BP30876 1174 aaKnown RBP15.75■□□□□ 0.11
TPM3-208ENST00000341485 GPS1Q13098 491 aa15.75■□□□□ 0.11
TPM3-208ENST00000341485 LRRC14Q15048 493 aa15.75■□□□□ 0.11
TPM3-208ENST00000341485 ANKRD20A8PQ5CZ79 823 aa15.75■□□□□ 0.11
TPM3-208ENST00000341485 POLNQ7Z5Q5 900 aa15.75■□□□□ 0.11
TPM3-208ENST00000341485 SERINC5Q86VE9 423 aa15.75■□□□□ 0.11
TPM3-208ENST00000341485 SLC4A11Q8NBS3 891 aa15.75■□□□□ 0.11
TPM3-208ENST00000341485 CXorf38Q8TB03 319 aa15.75■□□□□ 0.11
TPM3-208ENST00000341485 NKD2Q969F2 451 aaPredicted RBP15.75■□□□□ 0.11
TPM3-208ENST00000341485 KIF12Q96FN5 646 aa15.75■□□□□ 0.11
TPM3-208ENST00000341485 CPXM1Q96SM3 734 aa15.75■□□□□ 0.11
TPM3-208ENST00000341485 BEGAINQ9BUH8 593 aa15.75■□□□□ 0.11
TPM3-208ENST00000341485 SAYSD1Q9NPB0 183 aa15.75■□□□□ 0.11
TPM3-208ENST00000341485 NOD1Q9Y239 953 aa15.75■□□□□ 0.11
TPM3-208ENST00000341485 GOLGA6L7A0A1B0GV03 622 aa15.75■□□□□ 0.11
TPM3-208ENST00000341485 DNM1LO00429 736 aa15.75■□□□□ 0.11
TPM3-208ENST00000341485 LRCH4O75427 683 aa15.75■□□□□ 0.11
TPM3-208ENST00000341485 ERBB2P04626 1255 aa15.75■□□□□ 0.11
TPM3-208ENST00000341485 ITGB3P05106 788 aa15.75■□□□□ 0.11
TPM3-208ENST00000341485 VIMP08670 466 aaKnown RBP15.75■□□□□ 0.11
TPM3-208ENST00000341485 ABHD2P08910 425 aa15.75■□□□□ 0.11
TPM3-208ENST00000341485 KRT3P12035 628 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms