RNA–Protein interactions for RNA: ENST00000337354.8

SEC13-201, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEC13, Length 1,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-201ENST00000337354 PDE6CP51160 858 aa16.26■□□□□ 0.19
SEC13-201ENST00000337354 MAP3K7CLP57077 242 aa16.26■□□□□ 0.19
SEC13-201ENST00000337354 ZBED6P86452 979 aa16.26■□□□□ 0.19
SEC13-201ENST00000337354 BST2Q10589 180 aaKnown RBP16.26■□□□□ 0.19
SEC13-201ENST00000337354 SMAD4Q13485 552 aaKnown RBP16.26■□□□□ 0.19
SEC13-201ENST00000337354 GOLGA7BQ2TAP0 167 aa16.26■□□□□ 0.19
SEC13-201ENST00000337354 PKDCCQ504Y2 493 aa16.26■□□□□ 0.19
SEC13-201ENST00000337354 CYP4A22Q5TCH4 519 aa16.26■□□□□ 0.19
SEC13-201ENST00000337354 DENND5BQ6ZUT9 1274 aa16.26■□□□□ 0.19
SEC13-201ENST00000337354 SLC47A2Q86VL8 602 aa16.26■□□□□ 0.19
SEC13-201ENST00000337354 NUP93Q8N1F7 819 aa16.26■□□□□ 0.19
SEC13-201ENST00000337354 GIPC2Q8TF65 315 aa16.26■□□□□ 0.19
SEC13-201ENST00000337354 MYRFLQ96LU7 910 aa16.26■□□□□ 0.19
SEC13-201ENST00000337354 ZSWIM1Q9BR11 485 aa16.26■□□□□ 0.19
SEC13-201ENST00000337354 AIPL1Q9NZN9 384 aa16.26■□□□□ 0.19
SEC13-201ENST00000337354 UXTQ9UBK9 157 aaPredicted RBP16.26■□□□□ 0.19
SEC13-201ENST00000337354 PCDHGC3Q9UN70 934 aa16.26■□□□□ 0.19
SEC13-201ENST00000337354 LUC7L2Q9Y383 392 aaKnown RBP16.26■□□□□ 0.19
SEC13-201ENST00000337354 ZNF197O14709 1029 aa16.26■□□□□ 0.19
SEC13-201ENST00000337354 XPO1O14980 1071 aaKnown RBP16.26■□□□□ 0.19
SEC13-201ENST00000337354 BEST1O76090 585 aa16.26■□□□□ 0.19
SEC13-201ENST00000337354 MICAL2O94851 1124 aa16.26■□□□□ 0.19
SEC13-201ENST00000337354 RTN3O95197 1032 aaPredicted RBP16.26■□□□□ 0.19
SEC13-201ENST00000337354 TPM1P09493 284 aa16.26■□□□□ 0.19
SEC13-201ENST00000337354 PNMA6AP0CW24 399 aaPredicted RBP16.26■□□□□ 0.19
SEC13-201ENST00000337354 GPR15P49685 360 aa16.26■□□□□ 0.19
SEC13-201ENST00000337354 ZNF75DP51815 510 aa16.26■□□□□ 0.19
SEC13-201ENST00000337354 CACNA2D1P54289 1103 aa16.26■□□□□ 0.19
SEC13-201ENST00000337354 EPHA5P54756 1037 aa16.26■□□□□ 0.19
SEC13-201ENST00000337354 TTC30AQ86WT1 665 aa16.26■□□□□ 0.19
SEC13-201ENST00000337354 ZMIZ2Q8NF64 920 aa16.26■□□□□ 0.19
SEC13-201ENST00000337354 SUSD6Q92537 303 aa16.26■□□□□ 0.19
SEC13-201ENST00000337354 SYN2Q92777 582 aaPredicted RBP16.26■□□□□ 0.19
SEC13-201ENST00000337354 TRMT2BQ96GJ1 504 aaKnown RBP16.26■□□□□ 0.19
SEC13-201ENST00000337354 LHX5Q9H2C1 402 aa16.26■□□□□ 0.19
SEC13-201ENST00000337354 WDR6Q9NNW5 1121 aaKnown RBP16.26■□□□□ 0.19
SEC13-201ENST00000337354 ACP6Q9NPH0 428 aa16.26■□□□□ 0.19
SEC13-201ENST00000337354 ASAH2Q9NR71 780 aa16.26■□□□□ 0.19
SEC13-201ENST00000337354 TMEM30AQ9NV96 361 aa16.26■□□□□ 0.19
SEC13-201ENST00000337354 DNMT3BQ9UBC3 853 aaKnown RBP16.26■□□□□ 0.19
SEC13-201ENST00000337354 TSC2P49815 1807 aa16.25■□□□□ 0.19
SEC13-201ENST00000337354 LRRC53A6NM62 1247 aa16.25■□□□□ 0.19
SEC13-201ENST00000337354 SLC38A8A6NNN8 435 aa16.25■□□□□ 0.19
SEC13-201ENST00000337354 TNFRSF10BO14763 440 aa16.25■□□□□ 0.19
SEC13-201ENST00000337354 MBTPS2O43462 519 aa16.25■□□□□ 0.19
SEC13-201ENST00000337354 HMGA1P17096 107 aaKnown RBP16.25■□□□□ 0.19
SEC13-201ENST00000337354 PPP3CCP48454 512 aa16.25■□□□□ 0.19
SEC13-201ENST00000337354 PDE4CQ08493 712 aa16.25■□□□□ 0.19
SEC13-201ENST00000337354 CBX2Q14781 532 aaPredicted RBP16.25■□□□□ 0.19
SEC13-201ENST00000337354 PABPC1LQ4VXU2 614 aaKnown RBP16.25■□□□□ 0.19
SEC13-201ENST00000337354 SFMBT2Q5VUG0 894 aa16.25■□□□□ 0.19
SEC13-201ENST00000337354 PTCRAQ6ISU1 281 aaPredicted RBP16.25■□□□□ 0.19
SEC13-201ENST00000337354 PDZD4Q76G19 769 aaPredicted RBP16.25■□□□□ 0.19
SEC13-201ENST00000337354 IRF2BP2Q7Z5L9 587 aa16.25■□□□□ 0.19
SEC13-201ENST00000337354 GRASPQ7Z6J2 395 aaPredicted RBP16.25■□□□□ 0.19
SEC13-201ENST00000337354 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.25■□□□□ 0.19
SEC13-201ENST00000337354 UBA3Q8TBC4 463 aa16.25■□□□□ 0.19
SEC13-201ENST00000337354 ADAMTS19Q8TE59 1207 aa16.25■□□□□ 0.19
SEC13-201ENST00000337354 EPS8L1Q8TE68 723 aa16.25■□□□□ 0.19
SEC13-201ENST00000337354 STK32AQ8WU08 396 aa16.25■□□□□ 0.19
SEC13-201ENST00000337354 SLC35F5Q8WV83 523 aa16.25■□□□□ 0.19
SEC13-201ENST00000337354 HSFY1Q96LI6 401 aa16.25■□□□□ 0.19
SEC13-201ENST00000337354 CORO1BQ9BR76 489 aa16.25■□□□□ 0.19
SEC13-201ENST00000337354 TTLL2Q9BWV7 592 aa16.25■□□□□ 0.19
SEC13-201ENST00000337354 APOL5Q9BWW9 433 aa16.25■□□□□ 0.19
SEC13-201ENST00000337354 FBXO44Q9H4M3 255 aa16.25■□□□□ 0.19
SEC13-201ENST00000337354 IL37Q9NZH6 218 aa16.25■□□□□ 0.19
SEC13-201ENST00000337354 USP15Q9Y4E8 981 aaPredicted RBP16.25■□□□□ 0.19
SEC13-201ENST00000337354 CEP83Q9Y592 693 aa16.25■□□□□ 0.19
SEC13-201ENST00000337354 GOLGA6L3A6NEY3 463 aa16.24■□□□□ 0.19
SEC13-201ENST00000337354 M0QYV0 167 aa16.24■□□□□ 0.19
SEC13-201ENST00000337354 GYPCP04921 128 aa16.24■□□□□ 0.19
SEC13-201ENST00000337354 RHOP08100 348 aa16.24■□□□□ 0.19
SEC13-201ENST00000337354 GPD2P43304 727 aa16.24■□□□□ 0.19
SEC13-201ENST00000337354 PLA2G4AP47712 749 aa16.24■□□□□ 0.19
SEC13-201ENST00000337354 SDHAF4Q5VUM1 108 aa16.24■□□□□ 0.19
SEC13-201ENST00000337354 PIGZQ86VD9 579 aa16.24■□□□□ 0.19
SEC13-201ENST00000337354 GPR152Q8TDT2 470 aa16.24■□□□□ 0.19
SEC13-201ENST00000337354 CPLX3Q8WVH0 158 aa16.24■□□□□ 0.19
SEC13-201ENST00000337354 KCTD13Q8WZ19 329 aa16.24■□□□□ 0.19
SEC13-201ENST00000337354 DDX1Q92499 740 aaKnown RBP16.24■□□□□ 0.19
SEC13-201ENST00000337354 LRRC3Q9BY71 257 aa16.24■□□□□ 0.19
SEC13-201ENST00000337354 PDCL3Q9H2J4 239 aa16.24■□□□□ 0.19
SEC13-201ENST00000337354 BZW2Q9Y6E2 419 aaKnown RBP16.24■□□□□ 0.19
SEC13-201ENST00000337354 FAM92AA1XBS5 289 aa16.23■□□□□ 0.19
SEC13-201ENST00000337354 GRXCR2A6NFK2 248 aa16.23■□□□□ 0.19
SEC13-201ENST00000337354 HHLA1C9JL84 531 aa16.23■□□□□ 0.19
SEC13-201ENST00000337354 CALCAP01258 141 aa16.23■□□□□ 0.19
SEC13-201ENST00000337354 YWHAQP27348 245 aa16.23■□□□□ 0.19
SEC13-201ENST00000337354 CDC25CP30307 473 aa16.23■□□□□ 0.19
SEC13-201ENST00000337354 CASP14P31944 242 aa16.23■□□□□ 0.19
SEC13-201ENST00000337354 PRKCIP41743 596 aa16.23■□□□□ 0.19
SEC13-201ENST00000337354 SLC5A3P53794 718 aa16.23■□□□□ 0.19
SEC13-201ENST00000337354 CDR2Q01850 454 aa16.23■□□□□ 0.19
SEC13-201ENST00000337354 SMAD2Q15796 467 aaKnown RBP16.23■□□□□ 0.19
SEC13-201ENST00000337354 RAB41Q5JT25 222 aa16.23■□□□□ 0.19
SEC13-201ENST00000337354 NOP9Q86U38 636 aaKnown RBP16.23■□□□□ 0.19
SEC13-201ENST00000337354 TMC8Q8IU68 726 aa16.23■□□□□ 0.19
SEC13-201ENST00000337354 OVCA2Q8WZ82 227 aa16.23■□□□□ 0.19
SEC13-201ENST00000337354 SECISBP2LQ93073 1101 aaKnown RBP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms