RNA–Protein interactions for RNA: ENST00000334389.5

LINC00643-201, long intergenic non-protein coding RNA 643, humanhuman

TSL 2 BASIC

Gene LINC00643, Length 3,247 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-201ENST00000334389 EVCP57679 992 aa1.74□□□□□ -2.13
LINC00643-201ENST00000334389 YPEL5P62699 121 aa1.74□□□□□ -2.13
LINC00643-201ENST00000334389 BNC1Q01954 994 aa1.74□□□□□ -2.13
LINC00643-201ENST00000334389 GPR17Q13304 367 aa1.74□□□□□ -2.13
LINC00643-201ENST00000334389 PPP2R5CQ13362 524 aa1.74□□□□□ -2.13
LINC00643-201ENST00000334389 GAS6Q14393 721 aa1.74□□□□□ -2.13
LINC00643-201ENST00000334389 ZBTB6Q15916 424 aa1.74□□□□□ -2.13
LINC00643-201ENST00000334389 KIAA0753Q2KHM9 967 aa1.74□□□□□ -2.13
LINC00643-201ENST00000334389 UTP14CQ5TAP6 766 aaKnown RBP1.74□□□□□ -2.13
LINC00643-201ENST00000334389 ADAM5Q6NVV9 412 aa1.74□□□□□ -2.13
LINC00643-201ENST00000334389 CXCL17Q6UXB2 119 aa1.74□□□□□ -2.13
LINC00643-201ENST00000334389 DLK2Q6UY11 383 aa1.74□□□□□ -2.13
LINC00643-201ENST00000334389 CCAR1Q8IX12 1150 aaKnown RBP1.74□□□□□ -2.13
LINC00643-201ENST00000334389 NKAPQ8N5F7 415 aaKnown RBP1.74□□□□□ -2.13
LINC00643-201ENST00000334389 TMEM57Q8N5G2 664 aa1.74□□□□□ -2.13
LINC00643-201ENST00000334389 RNF10Q8N5U6 811 aaKnown RBP1.74□□□□□ -2.13
LINC00643-201ENST00000334389 LILRB4Q8NHJ6 448 aa1.74□□□□□ -2.13
LINC00643-201ENST00000334389 ZNF461Q8TAF7 563 aa1.74□□□□□ -2.13
LINC00643-201ENST00000334389 SPPL2BQ8TCT7 592 aa1.74□□□□□ -2.13
LINC00643-201ENST00000334389 CSGALNACT1Q8TDX6 532 aa1.74□□□□□ -2.13
LINC00643-201ENST00000334389 LMX1AQ8TE12 382 aa1.74□□□□□ -2.13
LINC00643-201ENST00000334389 PRCCQ92733 491 aaPredicted RBP1.74□□□□□ -2.13
LINC00643-201ENST00000334389 KCNB2Q92953 911 aa1.74□□□□□ -2.13
LINC00643-201ENST00000334389 FATE1Q969F0 183 aa1.74□□□□□ -2.13
LINC00643-201ENST00000334389 TTC17Q96AE7 1141 aa1.74□□□□□ -2.13
LINC00643-201ENST00000334389 XAGE2Q96GT9 111 aa1.74□□□□□ -2.13
LINC00643-201ENST00000334389 C8orf48Q96LL4 319 aa1.74□□□□□ -2.13
LINC00643-201ENST00000334389 ZSCAN10Q96SZ4 725 aaPredicted RBP1.74□□□□□ -2.13
LINC00643-201ENST00000334389 NUP58Q9BVL2 599 aa1.74□□□□□ -2.13
LINC00643-201ENST00000334389 MXD3Q9BW11 206 aa1.74□□□□□ -2.13
LINC00643-201ENST00000334389 OSBPL3Q9H4L5 887 aa1.74□□□□□ -2.13
LINC00643-201ENST00000334389 RNF41Q9H4P4 317 aaPredicted RBP1.74□□□□□ -2.13
LINC00643-201ENST00000334389 NRDE2Q9H7Z3 1164 aa1.74□□□□□ -2.13
LINC00643-201ENST00000334389 CNNM2Q9H8M5 875 aa1.74□□□□□ -2.13
LINC00643-201ENST00000334389 WSB2Q9NYS7 404 aaPredicted RBP1.74□□□□□ -2.13
LINC00643-201ENST00000334389 ABI3Q9P2A4 366 aa1.74□□□□□ -2.13
LINC00643-201ENST00000334389 WDR35Q9P2L0 1181 aa1.74□□□□□ -2.13
LINC00643-201ENST00000334389 CCPG1Q9ULG6 757 aa1.74□□□□□ -2.13
LINC00643-201ENST00000334389 PADI3Q9ULW8 664 aa1.74□□□□□ -2.13
LINC00643-201ENST00000334389 IPPQ9Y573 584 aa1.74□□□□□ -2.13
LINC00643-201ENST00000334389 STYXL1Q9Y6J8 313 aa1.74□□□□□ -2.13
LINC00643-201ENST00000334389 U3KQA8 63 aa1.74□□□□□ -2.13
LINC00643-201ENST00000334389 MYO18BQ8IUG5 2567 aa1.74□□□□□ -2.13
LINC00643-201ENST00000334389 SPTAN1Q13813 2472 aaKnown RBP1.74□□□□□ -2.13
LINC00643-201ENST00000334389 LOC105378220A0A1B0GUY1 285 aaPredicted RBP1.74□□□□□ -2.13
LINC00643-201ENST00000334389 PATL2C9JE40 543 aaKnown RBP1.74□□□□□ -2.13
LINC00643-201ENST00000334389 KCNN4O15554 427 aa1.74□□□□□ -2.13
LINC00643-201ENST00000334389 EFSO43281 561 aa1.74□□□□□ -2.13
LINC00643-201ENST00000334389 DHX16O60231 1041 aaKnown RBP1.74□□□□□ -2.13
LINC00643-201ENST00000334389 MARCH6O60337 910 aa1.74□□□□□ -2.13
LINC00643-201ENST00000334389 GCATO75600 419 aa1.74□□□□□ -2.13
LINC00643-201ENST00000334389 FLOT1O75955 427 aa1.74□□□□□ -2.13
LINC00643-201ENST00000334389 PDGFBP01127 241 aaPredicted RBP1.74□□□□□ -2.13
LINC00643-201ENST00000334389 WT1P19544 449 aaPredicted RBP1.74□□□□□ -2.13
LINC00643-201ENST00000334389 PRDX5P30044 214 aa1.74□□□□□ -2.13
LINC00643-201ENST00000334389 TRIM26Q12899 539 aaPredicted RBP1.74□□□□□ -2.13
LINC00643-201ENST00000334389 MXD4Q14582 209 aaPredicted RBP1.74□□□□□ -2.13
LINC00643-201ENST00000334389 KIZQ2M2Z5 673 aa1.74□□□□□ -2.13
LINC00643-201ENST00000334389 TNNI3KQ59H18 835 aa1.74□□□□□ -2.13
LINC00643-201ENST00000334389 TTC39BQ5VTQ0 682 aaPredicted RBP1.74□□□□□ -2.13
LINC00643-201ENST00000334389 TXNDC8Q6A555 127 aa1.74□□□□□ -2.13
LINC00643-201ENST00000334389 ANO7Q6IWH7 933 aa1.74□□□□□ -2.13
LINC00643-201ENST00000334389 CTR9Q6PD62 1173 aa1.74□□□□□ -2.13
LINC00643-201ENST00000334389 HTR3DQ70Z44 454 aa1.74□□□□□ -2.13
LINC00643-201ENST00000334389 PRSS42Q7Z5A4 293 aa1.74□□□□□ -2.13
LINC00643-201ENST00000334389 ADAMTSL2Q86TH1 951 aa1.74□□□□□ -2.13
LINC00643-201ENST00000334389 SLCO6A1Q86UG4 719 aa1.74□□□□□ -2.13
LINC00643-201ENST00000334389 TMEM86AQ8N2M4 240 aa1.74□□□□□ -2.13
LINC00643-201ENST00000334389 Q8NA96 180 aa1.74□□□□□ -2.13
LINC00643-201ENST00000334389 POGLUT1Q8NBL1 392 aa1.74□□□□□ -2.13
LINC00643-201ENST00000334389 PLEKHO2Q8TD55 490 aa1.74□□□□□ -2.13
LINC00643-201ENST00000334389 SLC5A5Q92911 643 aa1.74□□□□□ -2.13
LINC00643-201ENST00000334389 ATP6V0A1Q93050 837 aa1.74□□□□□ -2.13
LINC00643-201ENST00000334389 WNT8BQ93098 351 aa1.74□□□□□ -2.13
LINC00643-201ENST00000334389 CCNL2Q96S94 520 aaPredicted RBP1.74□□□□□ -2.13
LINC00643-201ENST00000334389 USB1Q9BQ65 265 aaKnown RBP1.74□□□□□ -2.13
LINC00643-201ENST00000334389 TRIM34Q9BYJ4 488 aa1.74□□□□□ -2.13
LINC00643-201ENST00000334389 FTOQ9C0B1 505 aaKnown RBP eCLIP1.74□□□□□ -2.13
LINC00643-201ENST00000334389 LMAN1LQ9HAT1 526 aa1.74□□□□□ -2.13
LINC00643-201ENST00000334389 NCOA5Q9HCD5 579 aaKnown RBP1.74□□□□□ -2.13
LINC00643-201ENST00000334389 TMEM260Q9NX78 707 aa1.74□□□□□ -2.13
LINC00643-201ENST00000334389 USP25Q9UHP3 1055 aa1.74□□□□□ -2.13
LINC00643-201ENST00000334389 PPM1HQ9ULR3 514 aa1.74□□□□□ -2.13
LINC00643-201ENST00000334389 PCDHAC2Q9Y5I4 1007 aa1.74□□□□□ -2.13
LINC00643-201ENST00000334389 FPGT-TNNI3KV9GXZ4 949 aa1.74□□□□□ -2.13
LINC00643-201ENST00000334389 ASH1LQ9NR48 2969 aaKnown RBP1.74□□□□□ -2.13
LINC00643-201ENST00000334389 HIVEP2P31629 2446 aa1.73□□□□□ -2.13
LINC00643-201ENST00000334389 ARHGAP21Q5T5U3 1957 aa1.73□□□□□ -2.13
LINC00643-201ENST00000334389 TTC24A2A3L6 582 aaPredicted RBP1.73□□□□□ -2.13
LINC00643-201ENST00000334389 TMEM89A2RUT3 159 aa1.73□□□□□ -2.13
LINC00643-201ENST00000334389 PI4KAP2A4QPH2 592 aa1.73□□□□□ -2.13
LINC00643-201ENST00000334389 GPR89AB7ZAQ6 455 aa1.73□□□□□ -2.13
LINC00643-201ENST00000334389 K7EQS6 105 aa1.73□□□□□ -2.13
LINC00643-201ENST00000334389 TNFRSF10CO14798 259 aa1.73□□□□□ -2.13
LINC00643-201ENST00000334389 OPLAHO14841 1288 aa1.73□□□□□ -2.13
LINC00643-201ENST00000334389 IRAK2O43187 625 aa1.73□□□□□ -2.13
LINC00643-201ENST00000334389 GSTM1P09488 218 aa1.73□□□□□ -2.13
LINC00643-201ENST00000334389 GPR89BP0CG08 455 aa1.73□□□□□ -2.13
LINC00643-201ENST00000334389 TXNP10599 105 aaKnown RBP1.73□□□□□ -2.13
LINC00643-201ENST00000334389 HSPA5P11021 654 aaKnown RBP1.73□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms