RNA–Protein interactions for RNA: ENST00000330843.8

RAB11FIP1-202, Transcript of RAB11 family interacting protein 1, humanhuman

TSL 1 (best) BASIC

Gene RAB11FIP1, Length 7,811 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP1-202ENST00000330843 ROPN1BQ9BZX4 212 aaPredicted RBP13.2□□□□□ -0.3
RAB11FIP1-202ENST00000330843 POLR3FQ9H1D9 316 aaPredicted RBP13.2□□□□□ -0.3
RAB11FIP1-202ENST00000330843 EFCAB1Q9HAE3 211 aa13.2□□□□□ -0.3
RAB11FIP1-202ENST00000330843 ROPN1Q9HAT0 212 aaPredicted RBP13.2□□□□□ -0.3
RAB11FIP1-202ENST00000330843 RABL2BQ9UNT1 228 aa13.2□□□□□ -0.3
RAB11FIP1-202ENST00000330843 SNTNA6NMZ2 147 aa13.2□□□□□ -0.3
RAB11FIP1-202ENST00000330843 CLEC16AQ2KHT3 1053 aa13.2□□□□□ -0.3
RAB11FIP1-202ENST00000330843 COMMD2Q86X83 199 aa13.2□□□□□ -0.3
RAB11FIP1-202ENST00000330843 C18orf8Q96DM3 657 aa13.2□□□□□ -0.3
RAB11FIP1-202ENST00000330843 PLEKHG4BQ96PX9 1271 aa13.2□□□□□ -0.3
RAB11FIP1-202ENST00000330843 ERP44Q9BS26 406 aa13.2□□□□□ -0.3
RAB11FIP1-202ENST00000330843 SPATA16Q9BXB7 569 aa13.2□□□□□ -0.3
RAB11FIP1-202ENST00000330843 MAP3K6O95382 1288 aa13.2□□□□□ -0.3
RAB11FIP1-202ENST00000330843 FXR1P51114 621 aaKnown RBP eCLIP13.2□□□□□ -0.32e-6■■■□□ 17.8
RAB11FIP1-202ENST00000330843 DDX20Q9UHI6 824 aaKnown RBP13.2□□□□□ -0.3
RAB11FIP1-202ENST00000330843 CDHR2Q9BYE9 1310 aa13.2□□□□□ -0.3
RAB11FIP1-202ENST00000330843 ATP6V1C1P21283 382 aa13.2□□□□□ -0.3
RAB11FIP1-202ENST00000330843 NCKAP1LP55160 1127 aa13.2□□□□□ -0.3
RAB11FIP1-202ENST00000330843 LENG1Q96BZ8 264 aaPredicted RBP13.2□□□□□ -0.3
RAB11FIP1-202ENST00000330843 CUEDC1Q9NWM3 386 aaPredicted RBP13.2□□□□□ -0.3
RAB11FIP1-202ENST00000330843 EIF4G3O43432 1585 aaKnown RBP13.2□□□□□ -0.3
RAB11FIP1-202ENST00000330843 PER1O15534 1290 aaPredicted RBP13.2□□□□□ -0.3
RAB11FIP1-202ENST00000330843 STX5Q13190 355 aa13.2□□□□□ -0.3
RAB11FIP1-202ENST00000330843 DGUOKQ16854 277 aa13.2□□□□□ -0.3
RAB11FIP1-202ENST00000330843 SWSAP1Q6NVH7 229 aa13.2□□□□□ -0.3
RAB11FIP1-202ENST00000330843 GIPC3Q8TF64 312 aa13.2□□□□□ -0.3
RAB11FIP1-202ENST00000330843 ABCB10Q9NRK6 738 aa13.2□□□□□ -0.3
RAB11FIP1-202ENST00000330843 FKBP14Q9NWM8 211 aa13.2□□□□□ -0.3
RAB11FIP1-202ENST00000330843 BAIAP2Q9UQB8 552 aa13.2□□□□□ -0.3
RAB11FIP1-202ENST00000330843 HBS1LQ9Y450 684 aaKnown RBP13.2□□□□□ -0.3
RAB11FIP1-202ENST00000330843 CUL7Q14999 1698 aa13.2□□□□□ -0.3
RAB11FIP1-202ENST00000330843 GCC2Q8IWJ2 1684 aa13.2□□□□□ -0.3
RAB11FIP1-202ENST00000330843 THRAP10827 490 aa13.2□□□□□ -0.3
RAB11FIP1-202ENST00000330843 TDRD5Q8NAT2 981 aaKnown RBP13.2□□□□□ -0.3
RAB11FIP1-202ENST00000330843 FAM172AQ8WUF8 416 aa13.2□□□□□ -0.3
RAB11FIP1-202ENST00000330843 CCDC17Q96LX7 622 aa13.2□□□□□ -0.3
RAB11FIP1-202ENST00000330843 UNKQ9C0B0 810 aaKnown RBP13.2□□□□□ -0.3
RAB11FIP1-202ENST00000330843 TMCC3Q9ULS5 477 aa13.2□□□□□ -0.3
RAB11FIP1-202ENST00000330843 ATP10DQ9P241 1426 aa13.2□□□□□ -0.3
RAB11FIP1-202ENST00000330843 PNMA8CA0A1B0GUJ8 204 aa13.19□□□□□ -0.3
RAB11FIP1-202ENST00000330843 NDUFB5O43674 189 aa13.19□□□□□ -0.3
RAB11FIP1-202ENST00000330843 SUPT7LO94864 414 aa13.19□□□□□ -0.3
RAB11FIP1-202ENST00000330843 COMTP21964 271 aa13.19□□□□□ -0.3
RAB11FIP1-202ENST00000330843 KCNT1Q5JUK3 1230 aa13.19□□□□□ -0.3
RAB11FIP1-202ENST00000330843 CNKSR1Q969H4 720 aa13.19□□□□□ -0.3
RAB11FIP1-202ENST00000330843 ZNF341Q9BYN7 854 aa13.19□□□□□ -0.3
RAB11FIP1-202ENST00000330843 MUC3BQ9H195 1237 aa13.19□□□□□ -0.3
RAB11FIP1-202ENST00000330843 KIAA1586Q9HCI6 787 aa13.19□□□□□ -0.3
RAB11FIP1-202ENST00000330843 RIC8BQ9NVN3 520 aa13.19□□□□□ -0.3
RAB11FIP1-202ENST00000330843 MAP10Q9P2G4 905 aa13.19□□□□□ -0.3
RAB11FIP1-202ENST00000330843 N6AMT1Q9Y5N5 214 aa13.19□□□□□ -0.3
RAB11FIP1-202ENST00000330843 SYNCRIPO60506 623 aaKnown RBP13.19□□□□□ -0.3
RAB11FIP1-202ENST00000330843 ATG7O95352 703 aa13.19□□□□□ -0.3
RAB11FIP1-202ENST00000330843 VAC14Q08AM6 782 aa13.19□□□□□ -0.3
RAB11FIP1-202ENST00000330843 MXD3Q9BW11 206 aa13.19□□□□□ -0.3
RAB11FIP1-202ENST00000330843 RXFP1Q9HBX9 757 aa13.19□□□□□ -0.3
RAB11FIP1-202ENST00000330843 ERAP1Q9NZ08 941 aa13.19□□□□□ -0.3
RAB11FIP1-202ENST00000330843 SPIRE2Q8WWL2 714 aa13.19□□□□□ -0.3
RAB11FIP1-202ENST00000330843 FIG4Q92562 907 aa13.19□□□□□ -0.3
RAB11FIP1-202ENST00000330843 SERPINB12Q96P63 405 aa13.19□□□□□ -0.3
RAB11FIP1-202ENST00000330843 YME1L1Q96TA2 773 aa13.19□□□□□ -0.3
RAB11FIP1-202ENST00000330843 SH3GLB2Q9NR46 395 aa13.19□□□□□ -0.3
RAB11FIP1-202ENST00000330843 EHD3Q9NZN3 535 aa13.19□□□□□ -0.3
RAB11FIP1-202ENST00000330843 COL17A1Q9UMD9 1497 aaPredicted RBP13.19□□□□□ -0.3
RAB11FIP1-202ENST00000330843 NFICP08651 508 aa13.19□□□□□ -0.3
RAB11FIP1-202ENST00000330843 PAX3P23760 479 aa13.19□□□□□ -0.3
RAB11FIP1-202ENST00000330843 DGCR6Q14129 220 aa13.19□□□□□ -0.3
RAB11FIP1-202ENST00000330843 KRCC1Q9NPI7 259 aaPredicted RBP13.19□□□□□ -0.3
RAB11FIP1-202ENST00000330843 PRR23AA6NEV1 266 aa13.19□□□□□ -0.3
RAB11FIP1-202ENST00000330843 TNFAIP2Q03169 654 aa13.19□□□□□ -0.3
RAB11FIP1-202ENST00000330843 DGKDQ16760 1214 aa13.19□□□□□ -0.3
RAB11FIP1-202ENST00000330843 EFHC1Q5JVL4 640 aa13.19□□□□□ -0.3
RAB11FIP1-202ENST00000330843 AKAP14Q86UN6 197 aa13.19□□□□□ -0.3
RAB11FIP1-202ENST00000330843 RRN3Q9NYV6 651 aa13.19□□□□□ -0.3
RAB11FIP1-202ENST00000330843 MYOM2P54296 1465 aa13.19□□□□□ -0.3
RAB11FIP1-202ENST00000330843 ASNSP08243 561 aa13.19□□□□□ -0.3
RAB11FIP1-202ENST00000330843 SFNP31947 248 aa13.19□□□□□ -0.3
RAB11FIP1-202ENST00000330843 RIBC1Q8N443 379 aaPredicted RBP13.19□□□□□ -0.3
RAB11FIP1-202ENST00000330843 EIF2AK1Q9BQI3 630 aaKnown RBP13.19□□□□□ -0.3
RAB11FIP1-202ENST00000330843 DNAJC16Q9Y2G8 782 aa13.19□□□□□ -0.3
RAB11FIP1-202ENST00000330843 HS6ST1O60243 411 aa13.19□□□□□ -0.3
RAB11FIP1-202ENST00000330843 PDGFRBP09619 1106 aa13.19□□□□□ -0.3
RAB11FIP1-202ENST00000330843 GIMAP8Q8ND71 665 aaPredicted RBP13.19□□□□□ -0.3
RAB11FIP1-202ENST00000330843 PDLIM2Q96JY6 352 aa13.19□□□□□ -0.3
RAB11FIP1-202ENST00000330843 SH2D3AQ9BRG2 576 aa13.19□□□□□ -0.3
RAB11FIP1-202ENST00000330843 GPRC5DQ9NZD1 345 aa13.19□□□□□ -0.3
RAB11FIP1-202ENST00000330843 SRP68Q9UHB9 627 aaKnown RBP13.19□□□□□ -0.3
RAB11FIP1-202ENST00000330843 TNFAIP8O95379 198 aa13.18□□□□□ -0.3
RAB11FIP1-202ENST00000330843 ABCB1P08183 1280 aaPredicted RBP13.18□□□□□ -0.3
RAB11FIP1-202ENST00000330843 CYP2D6P10635 497 aa13.18□□□□□ -0.3
RAB11FIP1-202ENST00000330843 RAG1P15918 1043 aa13.18□□□□□ -0.3
RAB11FIP1-202ENST00000330843 ZNF37AP17032 561 aaPredicted RBP13.18□□□□□ -0.3
RAB11FIP1-202ENST00000330843 LSM3P62310 102 aaKnown RBP13.18□□□□□ -0.3
RAB11FIP1-202ENST00000330843 ZNF333Q96JL9 665 aa13.18□□□□□ -0.3
RAB11FIP1-202ENST00000330843 STK32BQ9NY57 414 aa13.18□□□□□ -0.3
RAB11FIP1-202ENST00000330843 DUSP12Q9UNI6 340 aa13.18□□□□□ -0.3
RAB11FIP1-202ENST00000330843 BGNP21810 368 aa13.18□□□□□ -0.3
RAB11FIP1-202ENST00000330843 DSG3P32926 999 aa13.18□□□□□ -0.3
RAB11FIP1-202ENST00000330843 CDK17Q00537 523 aa13.18□□□□□ -0.3
RAB11FIP1-202ENST00000330843 NDUFAF6Q330K2 333 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms