RNA–Protein interactions for RNA: ENST00000330394.2

EPHB3-201, Transcript of EPH receptor B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHB3, Length 4,236 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-201ENST00000330394 NSUN2Q08J23 767 aaKnown RBP eCLIP14.59□□□□□ -0.07
EPHB3-201ENST00000330394 RIPOR1Q6ZS17 1223 aa14.59□□□□□ -0.07
EPHB3-201ENST00000330394 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.59□□□□□ -0.07
EPHB3-201ENST00000330394 TRIM15Q9C019 465 aa14.59□□□□□ -0.07
EPHB3-201ENST00000330394 ARHGEF37A1IGU5 675 aa14.58□□□□□ -0.07
EPHB3-201ENST00000330394 A8MXQ7 604 aa14.58□□□□□ -0.07
EPHB3-201ENST00000330394 MLH1P40692 756 aa14.58□□□□□ -0.07
EPHB3-201ENST00000330394 MAPK10P53779 464 aa14.58□□□□□ -0.07
EPHB3-201ENST00000330394 HDAC4P56524 1084 aa14.58□□□□□ -0.07
EPHB3-201ENST00000330394 SLC1A5Q15758 541 aa14.58□□□□□ -0.07
EPHB3-201ENST00000330394 KHDC1Q4VXA5 237 aaKnown RBP14.58□□□□□ -0.07
EPHB3-201ENST00000330394 DCAF15Q66K64 600 aa14.58□□□□□ -0.07
EPHB3-201ENST00000330394 CNDP1Q96KN2 507 aa14.58□□□□□ -0.07
EPHB3-201ENST00000330394 FBXO40Q9UH90 709 aa14.58□□□□□ -0.07
EPHB3-201ENST00000330394 TGFB1I1O43294 461 aa14.58□□□□□ -0.08
EPHB3-201ENST00000330394 NR3C2P08235 984 aa14.58□□□□□ -0.08
EPHB3-201ENST00000330394 DENND5BQ6ZUT9 1274 aa14.58□□□□□ -0.08
EPHB3-201ENST00000330394 KRT27Q7Z3Y8 459 aa14.58□□□□□ -0.08
EPHB3-201ENST00000330394 TRABD2AQ86V40 505 aa14.58□□□□□ -0.08
EPHB3-201ENST00000330394 ALYREFQ86V81 257 aaKnown RBP14.58□□□□□ -0.08
EPHB3-201ENST00000330394 CPNE8Q86YQ8 564 aa14.58□□□□□ -0.08
EPHB3-201ENST00000330394 KIAA2013Q8IYS2 634 aa14.58□□□□□ -0.08
EPHB3-201ENST00000330394 APOL2Q9BQE5 337 aa14.58□□□□□ -0.08
EPHB3-201ENST00000330394 CEP41Q9BYV8 373 aa14.58□□□□□ -0.08
EPHB3-201ENST00000330394 MTMR12Q9C0I1 747 aa14.58□□□□□ -0.08
EPHB3-201ENST00000330394 NIF3L1Q9GZT8 377 aa14.58□□□□□ -0.08
EPHB3-201ENST00000330394 MRPL40Q9NQ50 206 aaKnown RBP14.58□□□□□ -0.08
EPHB3-201ENST00000330394 SLC17A7Q9P2U7 560 aa14.58□□□□□ -0.08
EPHB3-201ENST00000330394 SNX9Q9Y5X1 595 aa14.58□□□□□ -0.08
EPHB3-201ENST00000330394 SLC26A4O43511 780 aa14.58□□□□□ -0.08
EPHB3-201ENST00000330394 RALBP11234 206 aa14.58□□□□□ -0.08
EPHB3-201ENST00000330394 MRPS22P82650 360 aaKnown RBP14.58□□□□□ -0.08
EPHB3-201ENST00000330394 STXBP2Q15833 593 aa14.58□□□□□ -0.08
EPHB3-201ENST00000330394 SGSM1Q2NKQ1 1148 aa14.58□□□□□ -0.08
EPHB3-201ENST00000330394 CLNKQ7Z7G1 428 aa14.58□□□□□ -0.08
EPHB3-201ENST00000330394 RFWD2Q8NHY2 731 aa14.58□□□□□ -0.08
EPHB3-201ENST00000330394 ZNF606Q8WXB4 792 aa14.58□□□□□ -0.08
EPHB3-201ENST00000330394 TAAR1Q96RJ0 339 aa14.58□□□□□ -0.08
EPHB3-201ENST00000330394 NDNQ99608 321 aa14.58□□□□□ -0.08
EPHB3-201ENST00000330394 LRRC19Q9H756 370 aa14.58□□□□□ -0.08
EPHB3-201ENST00000330394 MST1RQ04912 1400 aa14.58□□□□□ -0.08
EPHB3-201ENST00000330394 SPDYE5A6NIY4 337 aa14.58□□□□□ -0.08
EPHB3-201ENST00000330394 PKNOX1P55347 436 aa14.58□□□□□ -0.08
EPHB3-201ENST00000330394 PDPK2PQ6A1A2 396 aa14.58□□□□□ -0.08
EPHB3-201ENST00000330394 OTOP1Q7RTM1 612 aa14.58□□□□□ -0.08
EPHB3-201ENST00000330394 PIGWQ7Z7B1 504 aa14.58□□□□□ -0.08
EPHB3-201ENST00000330394 ZSCAN18Q8TBC5 510 aaPredicted RBP14.58□□□□□ -0.08
EPHB3-201ENST00000330394 GFM2Q969S9 779 aaKnown RBP14.58□□□□□ -0.08
EPHB3-201ENST00000330394 MECRQ9BV79 373 aa14.58□□□□□ -0.08
EPHB3-201ENST00000330394 PAIP1Q9H074 479 aaKnown RBP14.58□□□□□ -0.08
EPHB3-201ENST00000330394 WDR35Q9P2L0 1181 aa14.58□□□□□ -0.08
EPHB3-201ENST00000330394 EXTL3O43909 919 aa14.57□□□□□ -0.08
EPHB3-201ENST00000330394 TMCC1O94876 653 aa14.57□□□□□ -0.08
EPHB3-201ENST00000330394 PDGFRBP09619 1106 aa14.57□□□□□ -0.08
EPHB3-201ENST00000330394 NPR1P16066 1061 aa14.57□□□□□ -0.08
EPHB3-201ENST00000330394 SPRP35270 261 aaPredicted RBP14.57□□□□□ -0.08
EPHB3-201ENST00000330394 EML3Q32P44 896 aa14.57□□□□□ -0.08
EPHB3-201ENST00000330394 FAM47CQ5HY64 1035 aa14.57□□□□□ -0.08
EPHB3-201ENST00000330394 LRRC71Q8N4P6 559 aa14.57□□□□□ -0.08
EPHB3-201ENST00000330394 LRMDAQ9H2I8 198 aa14.57□□□□□ -0.08
EPHB3-201ENST00000330394 DDX28Q9NUL7 540 aaKnown RBP14.57□□□□□ -0.08
EPHB3-201ENST00000330394 PKD2L2Q9NZM6 624 aa14.57□□□□□ -0.08
EPHB3-201ENST00000330394 IL1RAPL1Q9NZN1 696 aa14.57□□□□□ -0.08
EPHB3-201ENST00000330394 PRKCBP05771 671 aa14.57□□□□□ -0.08
EPHB3-201ENST00000330394 SP100P23497 879 aaPredicted RBP14.57□□□□□ -0.08
EPHB3-201ENST00000330394 TPP2P29144 1249 aaPredicted RBP14.57□□□□□ -0.08
EPHB3-201ENST00000330394 RARRES1P49788 294 aa14.57□□□□□ -0.08
EPHB3-201ENST00000330394 BST1Q10588 318 aa14.57□□□□□ -0.08
EPHB3-201ENST00000330394 ASTE1Q2TB18 679 aaPredicted RBP14.57□□□□□ -0.08
EPHB3-201ENST00000330394 MOXD1Q6UVY6 613 aa14.57□□□□□ -0.08
EPHB3-201ENST00000330394 BNC2Q6ZN30 1099 aaPredicted RBP14.57□□□□□ -0.08
EPHB3-201ENST00000330394 LPCAT2Q7L5N7 544 aa14.57□□□□□ -0.08
EPHB3-201ENST00000330394 ABRAQ8N0Z2 381 aa14.57□□□□□ -0.08
EPHB3-201ENST00000330394 APOPT1Q96IL0 206 aa14.57□□□□□ -0.08
EPHB3-201ENST00000330394 ILKAPQ9H0C8 392 aaPredicted RBP14.57□□□□□ -0.08
EPHB3-201ENST00000330394 DDTLA6NHG4 134 aaPredicted RBP14.57□□□□□ -0.08
EPHB3-201ENST00000330394 MSX2P35548 267 aaPredicted RBP14.57□□□□□ -0.08
EPHB3-201ENST00000330394 ADARP55265 1226 aaKnown RBP14.57□□□□□ -0.08
EPHB3-201ENST00000330394 NME5P56597 212 aa14.57□□□□□ -0.08
EPHB3-201ENST00000330394 KCTD2Q14681 263 aa14.57□□□□□ -0.08
EPHB3-201ENST00000330394 EMC2Q15006 297 aa14.57□□□□□ -0.08
EPHB3-201ENST00000330394 XKR3Q5GH77 459 aa14.57□□□□□ -0.08
EPHB3-201ENST00000330394 WLSQ5T9L3 541 aa14.57□□□□□ -0.08
EPHB3-201ENST00000330394 N4BP2L1Q5TBK1 243 aaPredicted RBP14.57□□□□□ -0.08
EPHB3-201ENST00000330394 CLEC4FQ8N1N0 589 aa14.57□□□□□ -0.08
EPHB3-201ENST00000330394 LRRN4Q8WUT4 740 aa14.57□□□□□ -0.08
EPHB3-201ENST00000330394 UCMAQ8WVF2 138 aa14.57□□□□□ -0.08
EPHB3-201ENST00000330394 COPS7BQ9H9Q2 264 aaPredicted RBP14.57□□□□□ -0.08
EPHB3-201ENST00000330394 BTBD7Q9P203 1132 aa14.57□□□□□ -0.08
EPHB3-201ENST00000330394 RPTORQ8N122 1335 aa14.57□□□□□ -0.08
EPHB3-201ENST00000330394 ANGPT2O15123 496 aa14.56□□□□□ -0.08
EPHB3-201ENST00000330394 HNRNPRO43390 633 aaKnown RBP14.56□□□□□ -0.08
EPHB3-201ENST00000330394 CHEK2O96017 543 aa14.56□□□□□ -0.08
EPHB3-201ENST00000330394 ANPEPP15144 967 aa14.56□□□□□ -0.08
EPHB3-201ENST00000330394 FMO1Q01740 532 aa14.56□□□□□ -0.08
EPHB3-201ENST00000330394 CYP24A1Q07973 514 aa14.56□□□□□ -0.08
EPHB3-201ENST00000330394 PDAP1Q13442 181 aaKnown RBP14.56□□□□□ -0.08
EPHB3-201ENST00000330394 TSTA3Q13630 321 aaPredicted RBP14.56□□□□□ -0.08
EPHB3-201ENST00000330394 ATP1A4Q13733 1029 aa14.56□□□□□ -0.08
EPHB3-201ENST00000330394 NRF1Q16656 503 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms