RNA–Protein interactions for RNA: ENST00000317716.13

CDHR3-201, Transcript of cadherin related family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDHR3, Length 3,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-201ENST00000317716 SEMA6AQ9H2E6 1030 aa7.85□□□□□ -1.15
CDHR3-201ENST00000317716 ZNF395Q9H8N7 513 aaPredicted RBP7.85□□□□□ -1.15
CDHR3-201ENST00000317716 MAN1C1Q9NR34 630 aa7.85□□□□□ -1.15
CDHR3-201ENST00000317716 RBMX2Q9Y388 322 aaKnown RBP7.85□□□□□ -1.15
CDHR3-201ENST00000317716 WNK3Q9BYP7 1800 aa7.85□□□□□ -1.15
CDHR3-201ENST00000317716 PIK3CDO00329 1044 aa7.85□□□□□ -1.15
CDHR3-201ENST00000317716 TMCC1O94876 653 aa7.85□□□□□ -1.15
CDHR3-201ENST00000317716 POLR2BP30876 1174 aaKnown RBP7.85□□□□□ -1.15
CDHR3-201ENST00000317716 PRKCIP41743 596 aa7.85□□□□□ -1.15
CDHR3-201ENST00000317716 MAPK6Q16659 721 aa7.85□□□□□ -1.15
CDHR3-201ENST00000317716 JADE1Q6IE81 842 aa7.85□□□□□ -1.15
CDHR3-201ENST00000317716 ACAD10Q6JQN1 1059 aa7.85□□□□□ -1.15
CDHR3-201ENST00000317716 ZNF572Q7Z3I7 529 aaPredicted RBP7.85□□□□□ -1.15
CDHR3-201ENST00000317716 RYBPQ8N488 228 aaPredicted RBP7.85□□□□□ -1.15
CDHR3-201ENST00000317716 INPP5DQ92835 1189 aa7.85□□□□□ -1.15
CDHR3-201ENST00000317716 PPP2R3CQ969Q6 453 aa7.85□□□□□ -1.15
CDHR3-201ENST00000317716 CCDC138Q96M89 665 aa7.85□□□□□ -1.15
CDHR3-201ENST00000317716 MPHOSPH6Q99547 160 aaKnown RBP7.85□□□□□ -1.15
CDHR3-201ENST00000317716 SERPINI1Q99574 410 aa7.85□□□□□ -1.15
CDHR3-201ENST00000317716 UBE2OQ9C0C9 1292 aaKnown RBP7.85□□□□□ -1.15
CDHR3-201ENST00000317716 PAIP1Q9H074 479 aaKnown RBP7.85□□□□□ -1.15
CDHR3-201ENST00000317716 DHX35Q9H5Z1 703 aaKnown RBP7.85□□□□□ -1.15
CDHR3-201ENST00000317716 PFDN4Q9NQP4 134 aa7.85□□□□□ -1.15
CDHR3-201ENST00000317716 PLA2G4CQ9UP65 541 aa7.85□□□□□ -1.15
CDHR3-201ENST00000317716 TMA7Q9Y2S6 64 aaKnown RBP7.85□□□□□ -1.15
CDHR3-201ENST00000317716 SPEF2Q9C093 1822 aa7.85□□□□□ -1.15
CDHR3-201ENST00000317716 MYOCOSA0A1B0GUC4 107 aa7.84□□□□□ -1.15
CDHR3-201ENST00000317716 CAPN8A6NHC0 703 aa7.84□□□□□ -1.15
CDHR3-201ENST00000317716 XPOTO43592 962 aaKnown RBP7.84□□□□□ -1.15
CDHR3-201ENST00000317716 DCXO43602 365 aa7.84□□□□□ -1.15
CDHR3-201ENST00000317716 PRPSAP2O60256 369 aa7.84□□□□□ -1.15
CDHR3-201ENST00000317716 C6orf222P0C671 652 aaPredicted RBP7.84□□□□□ -1.15
CDHR3-201ENST00000317716 CETPP11597 493 aa7.84□□□□□ -1.15
CDHR3-201ENST00000317716 ELK3P41970 407 aa7.84□□□□□ -1.15
CDHR3-201ENST00000317716 YARSP54577 528 aaKnown RBP7.84□□□□□ -1.15
CDHR3-201ENST00000317716 SLC12A2P55011 1212 aa7.84□□□□□ -1.15
CDHR3-201ENST00000317716 CDK16Q00536 496 aa7.84□□□□□ -1.15
CDHR3-201ENST00000317716 SLC35G1Q2M3R5 365 aa7.84□□□□□ -1.15
CDHR3-201ENST00000317716 LRRC8EQ6NSJ5 796 aa7.84□□□□□ -1.15
CDHR3-201ENST00000317716 TRABD2AQ86V40 505 aa7.84□□□□□ -1.15
CDHR3-201ENST00000317716 ZNF786Q8N393 782 aa7.84□□□□□ -1.15
CDHR3-201ENST00000317716 RASGEF1CQ8N431 466 aa7.84□□□□□ -1.15
CDHR3-201ENST00000317716 EPS8L1Q8TE68 723 aa7.84□□□□□ -1.15
CDHR3-201ENST00000317716 OTUD5Q96G74 571 aa7.84□□□□□ -1.15
CDHR3-201ENST00000317716 MSTO1Q9BUK6 570 aa7.84□□□□□ -1.15
CDHR3-201ENST00000317716 COPS7BQ9H9Q2 264 aaPredicted RBP7.84□□□□□ -1.15
CDHR3-201ENST00000317716 GPATCH2LQ9NWQ4 482 aa7.84□□□□□ -1.15
CDHR3-201ENST00000317716 BCAP29Q9UHQ4 241 aa7.84□□□□□ -1.15
CDHR3-201ENST00000317716 HERC5Q9UII4 1024 aaKnown RBP7.84□□□□□ -1.15
CDHR3-201ENST00000317716 FNDC3AQ9Y2H6 1198 aaKnown RBP7.84□□□□□ -1.15
CDHR3-201ENST00000317716 MRPL11Q9Y3B7 192 aaKnown RBP7.84□□□□□ -1.15
CDHR3-201ENST00000317716 STARD13Q9Y3M8 1113 aa7.84□□□□□ -1.15
CDHR3-201ENST00000317716 PCDHA3Q9Y5H8 950 aa7.84□□□□□ -1.15
CDHR3-201ENST00000317716 UBR3Q6ZT12 1888 aa7.84□□□□□ -1.15
CDHR3-201ENST00000317716 PRR5-ARHGAP8B1AHC4 643 aa7.84□□□□□ -1.15
CDHR3-201ENST00000317716 KDM1AO60341 852 aa7.84□□□□□ -1.15
CDHR3-201ENST00000317716 FAM155BO75949 473 aa7.84□□□□□ -1.15
CDHR3-201ENST00000317716 OR6B1O95007 311 aa7.84□□□□□ -1.15
CDHR3-201ENST00000317716 CSPG5O95196 566 aa7.84□□□□□ -1.15
CDHR3-201ENST00000317716 SRGAP2BP0DMP2 458 aa7.84□□□□□ -1.15
CDHR3-201ENST00000317716 ATICP31939 592 aa7.84□□□□□ -1.15
CDHR3-201ENST00000317716 NUMBP49757 651 aa7.84□□□□□ -1.15
CDHR3-201ENST00000317716 ARHGAP8P85298 464 aa7.84□□□□□ -1.15
CDHR3-201ENST00000317716 OCRLQ01968 901 aa7.84□□□□□ -1.15
CDHR3-201ENST00000317716 ROR1Q01973 937 aa7.84□□□□□ -1.15
CDHR3-201ENST00000317716 POU5F1BQ06416 359 aa7.84□□□□□ -1.15
CDHR3-201ENST00000317716 FSTL1Q12841 308 aa7.84□□□□□ -1.15
CDHR3-201ENST00000317716 DGKZQ13574 1117 aa7.84□□□□□ -1.15
CDHR3-201ENST00000317716 PDK4Q16654 411 aa7.84□□□□□ -1.15
CDHR3-201ENST00000317716 CNPY1Q3B7I2 92 aa7.84□□□□□ -1.15
CDHR3-201ENST00000317716 Q4G0T1 1027 aa7.84□□□□□ -1.15
CDHR3-201ENST00000317716 LIN52Q52LA3 116 aa7.84□□□□□ -1.15
CDHR3-201ENST00000317716 SLC45A4Q5BKX6 768 aa7.84□□□□□ -1.15
CDHR3-201ENST00000317716 GADL1Q6ZQY3 521 aa7.84□□□□□ -1.15
CDHR3-201ENST00000317716 EIF1ADQ8N9N8 165 aaKnown RBP7.84□□□□□ -1.15
CDHR3-201ENST00000317716 RBM15BQ8NDT2 890 aaKnown RBP7.84□□□□□ -1.15
CDHR3-201ENST00000317716 C7orf43Q8WVR3 580 aa7.84□□□□□ -1.15
CDHR3-201ENST00000317716 ECSITQ9BQ95 431 aa7.84□□□□□ -1.15
CDHR3-201ENST00000317716 RMI1Q9H9A7 625 aa7.84□□□□□ -1.15
CDHR3-201ENST00000317716 FBXO28Q9NVF7 368 aa7.84□□□□□ -1.15
CDHR3-201ENST00000317716 PCYOX1Q9UHG3 505 aa7.84□□□□□ -1.15
CDHR3-201ENST00000317716 STRIP2Q9ULQ0 834 aa7.84□□□□□ -1.15
CDHR3-201ENST00000317716 KBTBD13C9JR72 458 aa7.84□□□□□ -1.15
CDHR3-201ENST00000317716 CYB561D2O14569 222 aa7.84□□□□□ -1.15
CDHR3-201ENST00000317716 AVILO75366 819 aa7.84□□□□□ -1.15
CDHR3-201ENST00000317716 NDUFB10O96000 172 aa7.84□□□□□ -1.15
CDHR3-201ENST00000317716 ARP10275 920 aa7.84□□□□□ -1.15
CDHR3-201ENST00000317716 PTGIRP43119 386 aa7.84□□□□□ -1.15
CDHR3-201ENST00000317716 PCYT1AP49585 367 aa7.84□□□□□ -1.15
CDHR3-201ENST00000317716 RGS7P49802 495 aa7.84□□□□□ -1.15
CDHR3-201ENST00000317716 NRLP54845 237 aa7.84□□□□□ -1.15
CDHR3-201ENST00000317716 PLOD1Q02809 727 aaPredicted RBP7.84□□□□□ -1.15
CDHR3-201ENST00000317716 SPP2Q13103 211 aa7.84□□□□□ -1.15
CDHR3-201ENST00000317716 AP3B2Q13367 1082 aa7.84□□□□□ -1.15
CDHR3-201ENST00000317716 KBTBD12Q3ZCT8 623 aa7.84□□□□□ -1.15
CDHR3-201ENST00000317716 FAM102AQ5T9C2 384 aaPredicted RBP7.84□□□□□ -1.15
CDHR3-201ENST00000317716 PPP1R2P3Q6NXS1 205 aa7.84□□□□□ -1.15
CDHR3-201ENST00000317716 MTHFD1LQ6UB35 978 aa7.84□□□□□ -1.15
CDHR3-201ENST00000317716 TSHZ1Q6ZSZ6 1077 aa7.84□□□□□ -1.15
CDHR3-201ENST00000317716 C16orf86Q6ZW13 317 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms