RNA–Protein interactions for RNA: ENST00000312413.10

CLCN6-201, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 2 BASIC

Gene CLCN6, Length 5,631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-201ENST00000312413 ATP6V1B2P21281 511 aa14.17□□□□□ -0.14
CLCN6-201ENST00000312413 RGS2P41220 211 aa14.17□□□□□ -0.14
CLCN6-201ENST00000312413 CAPZA2P47755 286 aa14.17□□□□□ -0.14
CLCN6-201ENST00000312413 SLC16A1P53985 500 aa14.17□□□□□ -0.14
CLCN6-201ENST00000312413 TWF1Q12792 350 aa14.17□□□□□ -0.14
CLCN6-201ENST00000312413 ZRANB3Q5FWF4 1079 aa14.17□□□□□ -0.14
CLCN6-201ENST00000312413 TMPRSS6Q8IU80 811 aa14.17□□□□□ -0.14
CLCN6-201ENST00000312413 ZCCHC7Q8N3Z6 543 aaKnown RBP14.17□□□□□ -0.14
CLCN6-201ENST00000312413 FLCNQ8NFG4 579 aa14.17□□□□□ -0.14
CLCN6-201ENST00000312413 UBA3Q8TBC4 463 aa14.17□□□□□ -0.14
CLCN6-201ENST00000312413 GINS4Q9BRT9 223 aa14.17□□□□□ -0.14
CLCN6-201ENST00000312413 ANKZF1Q9H8Y5 726 aa14.17□□□□□ -0.14
CLCN6-201ENST00000312413 UBAP1Q9NZ09 502 aa14.17□□□□□ -0.14
CLCN6-201ENST00000312413 C15orf41Q9Y2V0 281 aa14.17□□□□□ -0.14
CLCN6-201ENST00000312413 CD4P01730 458 aa14.16□□□□□ -0.14
CLCN6-201ENST00000312413 EIF2S1P05198 315 aaKnown RBP14.16□□□□□ -0.14
CLCN6-201ENST00000312413 CNTFP26441 200 aa14.16□□□□□ -0.14
CLCN6-201ENST00000312413 PPIDQ08752 370 aaKnown RBP14.16□□□□□ -0.14
CLCN6-201ENST00000312413 ATP1A4Q13733 1029 aa14.16□□□□□ -0.14
CLCN6-201ENST00000312413 CLEC16AQ2KHT3 1053 aa14.16□□□□□ -0.14
CLCN6-201ENST00000312413 RSBN1Q5VWQ0 802 aaPredicted RBP14.16□□□□□ -0.14
CLCN6-201ENST00000312413 OTOAQ7RTW8 1153 aa14.16□□□□□ -0.14
CLCN6-201ENST00000312413 KRT84Q9NSB2 600 aa14.16□□□□□ -0.14
CLCN6-201ENST00000312413 UTP6Q9NYH9 597 aaKnown RBP14.16□□□□□ -0.14
CLCN6-201ENST00000312413 COPG2Q9UBF2 871 aa14.16□□□□□ -0.14
CLCN6-201ENST00000312413 SDR42E2A6NKP2 422 aa14.16□□□□□ -0.14
CLCN6-201ENST00000312413 KPNA4O00629 521 aaPredicted RBP14.16□□□□□ -0.14
CLCN6-201ENST00000312413 ARHGEF7Q14155 803 aa14.16□□□□□ -0.14
CLCN6-201ENST00000312413 C16orf72Q14CZ0 275 aa14.16□□□□□ -0.14
CLCN6-201ENST00000312413 EZH2Q15910 746 aaKnown RBP14.16□□□□□ -0.14
CLCN6-201ENST00000312413 CYP51A1Q16850 503 aa14.16□□□□□ -0.14
CLCN6-201ENST00000312413 ARMC4Q5T2S8 1044 aa14.16□□□□□ -0.14
CLCN6-201ENST00000312413 RMND5AQ9H871 391 aa14.16□□□□□ -0.14
CLCN6-201ENST00000312413 WWOXQ9NZC7 414 aa14.16□□□□□ -0.14
CLCN6-201ENST00000312413 RUVBL2Q9Y230 463 aaKnown RBP14.16□□□□□ -0.14
CLCN6-201ENST00000312413 IGSF9BQ9UPX0 1349 aa14.16□□□□□ -0.14
CLCN6-201ENST00000312413 DNALI1O14645 258 aaPredicted RBP14.16□□□□□ -0.14
CLCN6-201ENST00000312413 RARBP10826 455 aa14.16□□□□□ -0.14
CLCN6-201ENST00000312413 PON1P27169 355 aa14.16□□□□□ -0.14
CLCN6-201ENST00000312413 PDPK2PQ6A1A2 396 aa14.16□□□□□ -0.14
CLCN6-201ENST00000312413 GPR63Q9BZJ6 419 aa14.16□□□□□ -0.14
CLCN6-201ENST00000312413 PAIP1Q9H074 479 aaKnown RBP14.16□□□□□ -0.14
CLCN6-201ENST00000312413 PRDM15P57071 1507 aaPredicted RBP14.16□□□□□ -0.14
CLCN6-201ENST00000312413 E9PBE3 544 aa14.16□□□□□ -0.14
CLCN6-201ENST00000312413 ZNF862O60290 1169 aa14.16□□□□□ -0.14
CLCN6-201ENST00000312413 KLHL41O60662 606 aa14.16□□□□□ -0.14
CLCN6-201ENST00000312413 HMBSP08397 361 aa14.16□□□□□ -0.14
CLCN6-201ENST00000312413 TXNP10599 105 aaKnown RBP14.16□□□□□ -0.14
CLCN6-201ENST00000312413 RRM2P31350 389 aa14.16□□□□□ -0.14
CLCN6-201ENST00000312413 PLIN5Q00G26 463 aa14.16□□□□□ -0.14
CLCN6-201ENST00000312413 GOLGA7BQ2TAP0 167 aa14.16□□□□□ -0.14
CLCN6-201ENST00000312413 UGT3A1Q6NUS8 523 aa14.16□□□□□ -0.14
CLCN6-201ENST00000312413 C19orf18Q8NEA5 215 aa14.16□□□□□ -0.14
CLCN6-201ENST00000312413 RDM1Q8NG50 284 aa14.16□□□□□ -0.14
CLCN6-201ENST00000312413 RBM46Q8TBY0 533 aaKnown RBP14.16□□□□□ -0.14
CLCN6-201ENST00000312413 MIEF2Q96C03 454 aa14.16□□□□□ -0.14
CLCN6-201ENST00000312413 LACRTQ9GZZ8 138 aa14.16□□□□□ -0.14
CLCN6-201ENST00000312413 RPAP3Q9H6T3 665 aaPredicted RBP14.16□□□□□ -0.14
CLCN6-201ENST00000312413 TRMT6Q9UJA5 497 aaKnown RBP14.16□□□□□ -0.14
CLCN6-201ENST00000312413 BGNP21810 368 aa14.16□□□□□ -0.14
CLCN6-201ENST00000312413 RFC5P40937 340 aa14.16□□□□□ -0.14
CLCN6-201ENST00000312413 HERVK_113P62684 666 aa14.16□□□□□ -0.14
CLCN6-201ENST00000312413 DEFB107AQ8IZN7 70 aa14.16□□□□□ -0.14
CLCN6-201ENST00000312413 TRIM63Q969Q1 353 aa14.16□□□□□ -0.14
CLCN6-201ENST00000312413 ZFRQ96KR1 1074 aaKnown RBP14.16□□□□□ -0.14
CLCN6-201ENST00000312413 TMCC3Q9ULS5 477 aa14.16□□□□□ -0.14
CLCN6-201ENST00000312413 CNTNAP5Q8WYK1 1306 aa14.15□□□□□ -0.14
CLCN6-201ENST00000312413 CYP2C8P10632 490 aa14.15□□□□□ -0.14
CLCN6-201ENST00000312413 EIF2B2P49770 351 aaKnown RBP14.15□□□□□ -0.14
CLCN6-201ENST00000312413 TFDP3Q5H9I0 405 aa14.15□□□□□ -0.14
CLCN6-201ENST00000312413 MRNIPQ6NTE8 343 aa14.15□□□□□ -0.14
CLCN6-201ENST00000312413 KRT78Q8N1N4 520 aa14.15□□□□□ -0.14
CLCN6-201ENST00000312413 RIT2Q99578 217 aa14.15□□□□□ -0.14
CLCN6-201ENST00000312413 MUC3BQ9H195 1237 aa14.15□□□□□ -0.14
CLCN6-201ENST00000312413 AGPAT3Q9NRZ7 376 aa14.15□□□□□ -0.14
CLCN6-201ENST00000312413 LSM7Q9UK45 103 aaKnown RBP14.15□□□□□ -0.14
CLCN6-201ENST00000312413 SAMD9LQ8IVG5 1584 aa14.15□□□□□ -0.14
CLCN6-201ENST00000312413 F8VZ95 297 aa14.15□□□□□ -0.14
CLCN6-201ENST00000312413 FOXN3O00409 490 aaPredicted RBP14.15□□□□□ -0.14
CLCN6-201ENST00000312413 ASNA1O43681 348 aa14.15□□□□□ -0.14
CLCN6-201ENST00000312413 C11orf74Q86VG3 221 aa14.15□□□□□ -0.14
CLCN6-201ENST00000312413 RMND5BQ96G75 393 aaPredicted RBP14.15□□□□□ -0.14
CLCN6-201ENST00000312413 CNOT7Q9UIV1 285 aaKnown RBP14.15□□□□□ -0.14
CLCN6-201ENST00000312413 PNMA8BQ9ULN7 279 aaPredicted RBP14.15□□□□□ -0.14
CLCN6-201ENST00000312413 C1orf232A0A0U1RR37 186 aa14.15□□□□□ -0.14
CLCN6-201ENST00000312413 TNFAIP8O95379 198 aa14.15□□□□□ -0.14
CLCN6-201ENST00000312413 GLI1P08151 1106 aa14.15□□□□□ -0.14
CLCN6-201ENST00000312413 AVPR1AP37288 418 aa14.15□□□□□ -0.14
CLCN6-201ENST00000312413 TRIM28Q13263 835 aaKnown RBP14.15□□□□□ -0.14
CLCN6-201ENST00000312413 PLA2G4FQ68DD2 849 aa14.15□□□□□ -0.14
CLCN6-201ENST00000312413 KYQ8NBH2 561 aa14.15□□□□□ -0.14
CLCN6-201ENST00000312413 SEPT1Q8WYJ6 367 aa14.15□□□□□ -0.14
CLCN6-201ENST00000312413 SPATA16Q9BXB7 569 aa14.15□□□□□ -0.14
CLCN6-201ENST00000312413 CACNA2D2Q9NY47 1150 aa14.15□□□□□ -0.14
CLCN6-201ENST00000312413 TTLL9Q3SXZ7 439 aa14.15□□□□□ -0.14
CLCN6-201ENST00000312413 ATP6AP1LQ52LC2 224 aa14.15□□□□□ -0.14
CLCN6-201ENST00000312413 FAM9CQ8IZT9 166 aa14.15□□□□□ -0.14
CLCN6-201ENST00000312413 UBE2OQ9C0C9 1292 aaKnown RBP14.15□□□□□ -0.14
CLCN6-201ENST00000312413 RERGLQ9H628 205 aa14.15□□□□□ -0.14
CLCN6-201ENST00000312413 RNF112Q9ULX5 631 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms