RNA–Protein interactions for RNA: ENST00000309279.11

CHD6-201, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-201ENST00000309279 KRT39Q6A163 491 aa8.76□□□□□ -1.01
CHD6-201ENST00000309279 FIP1L1Q6UN15 594 aaKnown RBP8.76□□□□□ -1.01
CHD6-201ENST00000309279 TAS1R1Q7RTX1 841 aa8.76□□□□□ -1.01
CHD6-201ENST00000309279 MTERF4Q7Z6M4 381 aaKnown RBP8.76□□□□□ -1.01
CHD6-201ENST00000309279 GALNT5Q7Z7M9 940 aa8.76□□□□□ -1.01
CHD6-201ENST00000309279 OR8H1Q8NGG4 311 aa8.76□□□□□ -1.01
CHD6-201ENST00000309279 HASPINQ8TF76 798 aa8.76□□□□□ -1.01
CHD6-201ENST00000309279 MRPL38Q96DV4 380 aaKnown RBP8.76□□□□□ -1.01
CHD6-201ENST00000309279 GUCD1Q96NT3 240 aa8.76□□□□□ -1.01
CHD6-201ENST00000309279 TRIM55Q9BYV6 548 aa8.76□□□□□ -1.01
CHD6-201ENST00000309279 IQCGQ9H095 443 aaKnown RBP8.76□□□□□ -1.01
CHD6-201ENST00000309279 ZBP1Q9H171 429 aa8.76□□□□□ -1.01
CHD6-201ENST00000309279 TMEM8AQ9HCN3 771 aa8.76□□□□□ -1.01
CHD6-201ENST00000309279 TLR9Q9NR96 1032 aa8.76□□□□□ -1.01
CHD6-201ENST00000309279 PIH1D1Q9NWS0 290 aaKnown RBP8.76□□□□□ -1.01
CHD6-201ENST00000309279 GDAP2Q9NXN4 497 aa8.76□□□□□ -1.01
CHD6-201ENST00000309279 AGAP1Q9UPQ3 857 aa8.76□□□□□ -1.01
CHD6-201ENST00000309279 COQ4Q9Y3A0 265 aa8.76□□□□□ -1.01
CHD6-201ENST00000309279 PCDHGA4Q9Y5G9 962 aa8.76□□□□□ -1.01
CHD6-201ENST00000309279 KPNA7A9QM74 516 aa8.75□□□□□ -1.01
CHD6-201ENST00000309279 BHMG1C9JSJ3 638 aaPredicted RBP8.75□□□□□ -1.01
CHD6-201ENST00000309279 J3KRW8 73 aa8.75□□□□□ -1.01
CHD6-201ENST00000309279 SYN3O14994 580 aa8.75□□□□□ -1.01
CHD6-201ENST00000309279 SKAP2O75563 359 aaPredicted RBP8.75□□□□□ -1.01
CHD6-201ENST00000309279 VNN1O95497 513 aa8.75□□□□□ -1.01
CHD6-201ENST00000309279 PGRP06401 933 aa8.75□□□□□ -1.01
CHD6-201ENST00000309279 BRCC3P46736 316 aa8.75□□□□□ -1.01
CHD6-201ENST00000309279 GCLMP48507 274 aa8.75□□□□□ -1.01
CHD6-201ENST00000309279 ZNF165P49910 485 aa8.75□□□□□ -1.01
CHD6-201ENST00000309279 DSG1Q02413 1049 aa8.75□□□□□ -1.01
CHD6-201ENST00000309279 IQCB1Q15051 598 aa8.75□□□□□ -1.01
CHD6-201ENST00000309279 TPD52L1Q16890 204 aaPredicted RBP8.75□□□□□ -1.01
CHD6-201ENST00000309279 GFOD2Q3B7J2 385 aa8.75□□□□□ -1.01
CHD6-201ENST00000309279 FAM171A1Q5VUB5 890 aa8.75□□□□□ -1.01
CHD6-201ENST00000309279 TOGARAM2Q6ZUX3 1019 aa8.75□□□□□ -1.01
CHD6-201ENST00000309279 LIMS2Q7Z4I7 341 aa8.75□□□□□ -1.01
CHD6-201ENST00000309279 RNF135Q8IUD6 432 aa8.75□□□□□ -1.01
CHD6-201ENST00000309279 ANKMY2Q8IV38 441 aa8.75□□□□□ -1.01
CHD6-201ENST00000309279 FAM114A1Q8IWE2 563 aa8.75□□□□□ -1.01
CHD6-201ENST00000309279 MRPL43Q8N983 215 aaKnown RBP8.75□□□□□ -1.01
CHD6-201ENST00000309279 GSDMBQ8TAX9 411 aa8.75□□□□□ -1.01
CHD6-201ENST00000309279 JAKMIP2Q96AA8 810 aa8.75□□□□□ -1.01
CHD6-201ENST00000309279 HPDLQ96IR7 371 aa8.75□□□□□ -1.01
CHD6-201ENST00000309279 CNOT6LQ96LI5 555 aaKnown RBP8.75□□□□□ -1.01
CHD6-201ENST00000309279 ZNF560Q96MR9 790 aa8.75□□□□□ -1.01
CHD6-201ENST00000309279 MOGAT1Q96PD6 335 aa8.75□□□□□ -1.01
CHD6-201ENST00000309279 CDX2Q99626 313 aaPredicted RBP8.75□□□□□ -1.01
CHD6-201ENST00000309279 HERC2P3Q9BVR0 1158 aa8.75□□□□□ -1.01
CHD6-201ENST00000309279 PRKD2Q9BZL6 878 aa8.75□□□□□ -1.01
CHD6-201ENST00000309279 TSPYL1Q9H0U9 437 aa8.75□□□□□ -1.01
CHD6-201ENST00000309279 XYLT2Q9H1B5 865 aa8.75□□□□□ -1.01
CHD6-201ENST00000309279 HSD3B7Q9H2F3 369 aa8.75□□□□□ -1.01
CHD6-201ENST00000309279 SAMSN1Q9NSI8 373 aaKnown RBP8.75□□□□□ -1.01
CHD6-201ENST00000309279 MTCH2Q9Y6C9 303 aa8.75□□□□□ -1.01
CHD6-201ENST00000309279 LRRC10BA6NIK2 292 aa8.74□□□□□ -1.01
CHD6-201ENST00000309279 P4HA2O15460 535 aa8.74□□□□□ -1.01
CHD6-201ENST00000309279 ASS1P00966 412 aaKnown RBP8.74□□□□□ -1.01
CHD6-201ENST00000309279 KRT19P08727 400 aa8.74□□□□□ -1.01
CHD6-201ENST00000309279 ZNF18P17022 549 aa8.74□□□□□ -1.01
CHD6-201ENST00000309279 TYMPP19971 482 aa8.74□□□□□ -1.01
CHD6-201ENST00000309279 CCNCP24863 283 aa8.74□□□□□ -1.01
CHD6-201ENST00000309279 EEF1GP26641 437 aaKnown RBP8.74□□□□□ -1.01
CHD6-201ENST00000309279 IRS1P35568 1242 aa8.74□□□□□ -1.01
CHD6-201ENST00000309279 RAD52P43351 418 aa8.74□□□□□ -1.01
CHD6-201ENST00000309279 MAPK8P45983 427 aa8.74□□□□□ -1.01
CHD6-201ENST00000309279 FMO5P49326 533 aa8.74□□□□□ -1.01
CHD6-201ENST00000309279 ZNF445P59923 1031 aa8.74□□□□□ -1.01
CHD6-201ENST00000309279 MYL6P60660 151 aa8.74□□□□□ -1.01
CHD6-201ENST00000309279 KCNH2Q12809 1159 aa8.74□□□□□ -1.01
CHD6-201ENST00000309279 MYO1EQ12965 1108 aa8.74□□□□□ -1.01
CHD6-201ENST00000309279 MRPL28Q13084 256 aaKnown RBP8.74□□□□□ -1.01
CHD6-201ENST00000309279 TRPC3Q13507 836 aa8.74□□□□□ -1.01
CHD6-201ENST00000309279 PIN1Q13526 163 aaPredicted RBP8.74□□□□□ -1.01
CHD6-201ENST00000309279 NCOA4Q13772 614 aa8.74□□□□□ -1.01
CHD6-201ENST00000309279 OCLNQ16625 522 aa8.74□□□□□ -1.01
CHD6-201ENST00000309279 SGSM1Q2NKQ1 1148 aa8.74□□□□□ -1.01
CHD6-201ENST00000309279 SV2CQ496J9 727 aa8.74□□□□□ -1.01
CHD6-201ENST00000309279 CBWD6Q4V339 395 aa8.74□□□□□ -1.01
CHD6-201ENST00000309279 TCP11X2Q5H9J9 407 aa8.74□□□□□ -1.01
CHD6-201ENST00000309279 DCAF17Q5H9S7 520 aaPredicted RBP8.74□□□□□ -1.01
CHD6-201ENST00000309279 CBWD3Q5JTY5 395 aa8.74□□□□□ -1.01
CHD6-201ENST00000309279 RTP2Q5QGT7 225 aa8.74□□□□□ -1.01
CHD6-201ENST00000309279 CBWD5Q5RIA9 395 aa8.74□□□□□ -1.01
CHD6-201ENST00000309279 TCERG1LQ5VWI1 586 aa8.74□□□□□ -1.01
CHD6-201ENST00000309279 FAM180BQ6P0A1 224 aa8.74□□□□□ -1.01
CHD6-201ENST00000309279 LRSAM1Q6UWE0 723 aa8.74□□□□□ -1.01
CHD6-201ENST00000309279 THNSL2Q86YJ6 484 aa8.74□□□□□ -1.01
CHD6-201ENST00000309279 DHX40Q8IX18 779 aaKnown RBP8.74□□□□□ -1.01
CHD6-201ENST00000309279 LILRB1Q8NHL6 650 aaPredicted RBP8.74□□□□□ -1.01
CHD6-201ENST00000309279 LNX1Q8TBB1 728 aaPredicted RBP8.74□□□□□ -1.01
CHD6-201ENST00000309279 ZNF75CPQ92670 426 aaPredicted RBP8.74□□□□□ -1.01
CHD6-201ENST00000309279 SENP8Q96LD8 212 aa8.74□□□□□ -1.01
CHD6-201ENST00000309279 FAM81BQ96LP2 452 aa8.74□□□□□ -1.01
CHD6-201ENST00000309279 GAS2L1Q99501 681 aaPredicted RBP8.74□□□□□ -1.01
CHD6-201ENST00000309279 ELAC2Q9BQ52 826 aaKnown RBP8.74□□□□□ -1.01
CHD6-201ENST00000309279 TCF25Q9BQ70 676 aa8.74□□□□□ -1.01
CHD6-201ENST00000309279 TTPALQ9BTX7 342 aa8.74□□□□□ -1.01
CHD6-201ENST00000309279 SARGQ9BW04 601 aa8.74□□□□□ -1.01
CHD6-201ENST00000309279 CYP4F11Q9HBI6 524 aa8.74□□□□□ -1.01
CHD6-201ENST00000309279 MED4Q9NPJ6 270 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms