RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 CTHP32929 405 aa21.11■□□□□ 0.97
PDZRN3-202ENST00000308537 GRIK1P39086 918 aa21.11■□□□□ 0.97
PDZRN3-202ENST00000308537 GCLMP48507 274 aa21.11■□□□□ 0.97
PDZRN3-202ENST00000308537 ZNF77Q15935 545 aa21.11■□□□□ 0.97
PDZRN3-202ENST00000308537 SGSM1Q2NKQ1 1148 aa21.11■□□□□ 0.97
PDZRN3-202ENST00000308537 MAMSTRQ6ZN01 415 aa21.11■□□□□ 0.97
PDZRN3-202ENST00000308537 YAF2Q8IY57 180 aa21.11■□□□□ 0.97
PDZRN3-202ENST00000308537 FAM186BQ8IYM0 893 aa21.11■□□□□ 0.97
PDZRN3-202ENST00000308537 FUKQ8N0W3 1084 aa21.11■□□□□ 0.97
PDZRN3-202ENST00000308537 TAF4BQ92750 862 aa21.11■□□□□ 0.97
PDZRN3-202ENST00000308537 EEF2KMTQ96G04 330 aa21.11■□□□□ 0.97
PDZRN3-202ENST00000308537 GSDMAQ96QA5 445 aa21.11■□□□□ 0.97
PDZRN3-202ENST00000308537 ELOVL4Q9GZR5 314 aa21.11■□□□□ 0.97
PDZRN3-202ENST00000308537 KIF9Q9HAQ2 790 aa21.11■□□□□ 0.97
PDZRN3-202ENST00000308537 PRMT8Q9NR22 394 aaPredicted RBP21.11■□□□□ 0.97
PDZRN3-202ENST00000308537 MRPS17Q9Y2R5 130 aaKnown RBP21.11■□□□□ 0.97
PDZRN3-202ENST00000308537 MYH10P35580 1976 aa21.1■□□□□ 0.97
PDZRN3-202ENST00000308537 SPECC1L-ADORA2AF8WAN1 911 aa21.1■□□□□ 0.97
PDZRN3-202ENST00000308537 TRIM66O15016 1216 aa21.1■□□□□ 0.97
PDZRN3-202ENST00000308537 OLFM2O95897 454 aa21.1■□□□□ 0.97
PDZRN3-202ENST00000308537 PSMC2P35998 433 aaKnown RBP21.1■□□□□ 0.97
PDZRN3-202ENST00000308537 AVPR1AP37288 418 aa21.1■□□□□ 0.97
PDZRN3-202ENST00000308537 PLCB2Q00722 1185 aa21.1■□□□□ 0.97
PDZRN3-202ENST00000308537 USP4Q13107 963 aa21.1■□□□□ 0.97
PDZRN3-202ENST00000308537 MTAPQ13126 283 aa21.1■□□□□ 0.97
PDZRN3-202ENST00000308537 ZNF658Q5TYW1 1059 aaPredicted RBP21.1■□□□□ 0.97
PDZRN3-202ENST00000308537 TRIM68Q6AZZ1 485 aa21.1■□□□□ 0.97
PDZRN3-202ENST00000308537 ELOA2Q8IYF1 753 aaPredicted RBP21.1■□□□□ 0.97
PDZRN3-202ENST00000308537 CRYBG2Q8N1P7 616 aa21.1■□□□□ 0.97
PDZRN3-202ENST00000308537 ZMIZ2Q8NF64 920 aa21.1■□□□□ 0.97
PDZRN3-202ENST00000308537 TTC8Q8TAM2 541 aa21.1■□□□□ 0.97
PDZRN3-202ENST00000308537 MSANTD3Q96H12 275 aa21.1■□□□□ 0.97
PDZRN3-202ENST00000308537 TWNKQ96RR1 684 aa21.1■□□□□ 0.97
PDZRN3-202ENST00000308537 C8orf33Q9H7E9 229 aaPredicted RBP21.1■□□□□ 0.97
PDZRN3-202ENST00000308537 GKN1Q9NS71 199 aa21.1■□□□□ 0.97
PDZRN3-202ENST00000308537 IL37Q9NZH6 218 aa21.1■□□□□ 0.97
PDZRN3-202ENST00000308537 R4GN57 208 aa21.1■□□□□ 0.97
PDZRN3-202ENST00000308537 FRYLO94915 3013 aa21.1■□□□□ 0.97
PDZRN3-202ENST00000308537 TNFRSF10BO14763 440 aa21.09■□□□□ 0.97
PDZRN3-202ENST00000308537 GADD45BO75293 160 aaPredicted RBP21.09■□□□□ 0.97
PDZRN3-202ENST00000308537 TCF3P15923 654 aa21.09■□□□□ 0.97
PDZRN3-202ENST00000308537 INCA1Q0VD86 236 aa21.09■□□□□ 0.97
PDZRN3-202ENST00000308537 ZNF528Q3MIS6 628 aa21.09■□□□□ 0.97
PDZRN3-202ENST00000308537 FAM35AQ86V20 835 aa21.09■□□□□ 0.97
PDZRN3-202ENST00000308537 RALGPS2Q86X27 583 aaPredicted RBP21.09■□□□□ 0.97
PDZRN3-202ENST00000308537 CSGALNACT1Q8TDX6 532 aa21.09■□□□□ 0.97
PDZRN3-202ENST00000308537 WHAMMQ8TF30 809 aa21.09■□□□□ 0.97
PDZRN3-202ENST00000308537 SEMA4DQ92854 862 aa21.09■□□□□ 0.97
PDZRN3-202ENST00000308537 KCNK16Q96T55 309 aa21.09■□□□□ 0.97
PDZRN3-202ENST00000308537 SPATA6Q9NWH7 488 aaPredicted RBP21.09■□□□□ 0.97
PDZRN3-202ENST00000308537 FBXO4Q9UKT5 387 aa21.09■□□□□ 0.97
PDZRN3-202ENST00000308537 ATG2BQ96BY7 2078 aa21.09■□□□□ 0.97
PDZRN3-202ENST00000308537 ZNF840PA6NDX5 716 aa21.08■□□□□ 0.97
PDZRN3-202ENST00000308537 NCAM2O15394 837 aa21.08■□□□□ 0.97
PDZRN3-202ENST00000308537 BMP6P22004 513 aa21.08■□□□□ 0.97
PDZRN3-202ENST00000308537 RPL13P26373 211 aaKnown RBP21.08■□□□□ 0.97
PDZRN3-202ENST00000308537 PIK3CAP42336 1068 aa21.08■□□□□ 0.97
PDZRN3-202ENST00000308537 NDST1P52848 882 aa21.08■□□□□ 0.97
PDZRN3-202ENST00000308537 ORC1Q13415 861 aa21.08■□□□□ 0.97
PDZRN3-202ENST00000308537 CCINQ13939 588 aa21.08■□□□□ 0.97
PDZRN3-202ENST00000308537 ACOT1Q86TX2 421 aa21.08■□□□□ 0.97
PDZRN3-202ENST00000308537 ADSSL1Q8N142 457 aa21.08■□□□□ 0.97
PDZRN3-202ENST00000308537 ARL14EPQ8N8R7 260 aaPredicted RBP21.08■□□□□ 0.97
PDZRN3-202ENST00000308537 NKD2Q969F2 451 aaPredicted RBP21.08■□□□□ 0.97
PDZRN3-202ENST00000308537 LMAN1LQ9HAT1 526 aa21.08■□□□□ 0.97
PDZRN3-202ENST00000308537 TMEM8AQ9HCN3 771 aa21.08■□□□□ 0.97
PDZRN3-202ENST00000308537 MYO16Q9Y6X6 1858 aa21.08■□□□□ 0.97
PDZRN3-202ENST00000308537 FAM92AA1XBS5 289 aa21.07■□□□□ 0.96
PDZRN3-202ENST00000308537 TRIM49BA6NDI0 452 aa21.07■□□□□ 0.96
PDZRN3-202ENST00000308537 BEST1O76090 585 aa21.07■□□□□ 0.96
PDZRN3-202ENST00000308537 OAS1P00973 400 aaKnown RBP21.07■□□□□ 0.96
PDZRN3-202ENST00000308537 ARSAP15289 507 aa21.07■□□□□ 0.96
PDZRN3-202ENST00000308537 CD44P16070 742 aaKnown RBP21.07■□□□□ 0.96
PDZRN3-202ENST00000308537 ANKRD40Q6AI12 368 aa21.07■□□□□ 0.96
PDZRN3-202ENST00000308537 UNC93AQ86WB7 457 aa21.07■□□□□ 0.96
PDZRN3-202ENST00000308537 C12orf29Q8N999 325 aa21.07■□□□□ 0.96
PDZRN3-202ENST00000308537 ZBTB44Q8NCP5 570 aa21.07■□□□□ 0.96
PDZRN3-202ENST00000308537 SMOQ99835 787 aa21.07■□□□□ 0.96
PDZRN3-202ENST00000308537 RNF38Q9H0F5 515 aa21.07■□□□□ 0.96
PDZRN3-202ENST00000308537 EBF3Q9H4W6 596 aa21.07■□□□□ 0.96
PDZRN3-202ENST00000308537 TRPC7Q9HCX4 862 aa21.07■□□□□ 0.96
PDZRN3-202ENST00000308537 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.07■□□□□ 0.96
PDZRN3-202ENST00000308537 RBM12Q9NTZ6 932 aaKnown RBP21.07■□□□□ 0.96
PDZRN3-202ENST00000308537 RMND1Q9NWS8 449 aa21.07■□□□□ 0.96
PDZRN3-202ENST00000308537 C2orf42Q9NWW7 574 aa21.07■□□□□ 0.96
PDZRN3-202ENST00000308537 ARHGAP26Q9UNA1 814 aa21.07■□□□□ 0.96
PDZRN3-202ENST00000308537 KIAA1549LQ6ZVL6 1849 aa21.06■□□□□ 0.96
PDZRN3-202ENST00000308537 TRAV19A0A0A6YYK7 116 aa21.06■□□□□ 0.96
PDZRN3-202ENST00000308537 GOLGA6L4A6NEF3 574 aa21.06■□□□□ 0.96
PDZRN3-202ENST00000308537 LAMTOR5O43504 91 aa21.06■□□□□ 0.96
PDZRN3-202ENST00000308537 USP17L7P0C7H9 530 aa21.06■□□□□ 0.96
PDZRN3-202ENST00000308537 CCDC130P13994 396 aa21.06■□□□□ 0.96
PDZRN3-202ENST00000308537 ANXA13P27216 316 aa21.06■□□□□ 0.96
PDZRN3-202ENST00000308537 GTF2H1P32780 548 aa21.06■□□□□ 0.96
PDZRN3-202ENST00000308537 KPNA1P52294 538 aaPredicted RBP21.06■□□□□ 0.96
PDZRN3-202ENST00000308537 TAF10Q12962 218 aa21.06■□□□□ 0.96
PDZRN3-202ENST00000308537 RUNX3Q13761 415 aa21.06■□□□□ 0.96
PDZRN3-202ENST00000308537 MTF1Q14872 753 aa21.06■□□□□ 0.96
PDZRN3-202ENST00000308537 ITPRIPL2Q3MIP1 535 aa21.06■□□□□ 0.96
PDZRN3-202ENST00000308537 C1orf228Q6PIY5 440 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms