RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 OMDQ99983 421 aa11.13□□□□□ -0.63
SYNPO2-201ENST00000307142 ZMYND8Q9ULU4 1186 aaPredicted RBP11.13□□□□□ -0.63
SYNPO2-201ENST00000307142 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.13□□□□□ -0.63
SYNPO2-201ENST00000307142 E2F8A0AVK6 867 aa11.13□□□□□ -0.63
SYNPO2-201ENST00000307142 EFCAB14O75071 495 aa11.13□□□□□ -0.63
SYNPO2-201ENST00000307142 RHOBTB1O94844 696 aa11.13□□□□□ -0.63
SYNPO2-201ENST00000307142 PRKCZQ05513 592 aa11.13□□□□□ -0.63
SYNPO2-201ENST00000307142 USP41Q3LFD5 358 aa11.13□□□□□ -0.63
SYNPO2-201ENST00000307142 PHLDB3Q6NSJ2 640 aa11.13□□□□□ -0.63
SYNPO2-201ENST00000307142 LINC00523Q86TU6 105 aa11.13□□□□□ -0.63
SYNPO2-201ENST00000307142 WDR48Q8TAF3 677 aa11.13□□□□□ -0.63
SYNPO2-201ENST00000307142 ELMO3Q96BJ8 720 aa11.13□□□□□ -0.63
SYNPO2-201ENST00000307142 PNMA5Q96PV4 448 aa11.13□□□□□ -0.63
SYNPO2-201ENST00000307142 TRAIPQ9BWF2 469 aa11.13□□□□□ -0.63
SYNPO2-201ENST00000307142 CAPN10Q9HC96 672 aa11.13□□□□□ -0.63
SYNPO2-201ENST00000307142 HEATR9A2RTY3 570 aa11.13□□□□□ -0.63
SYNPO2-201ENST00000307142 ZW10O43264 779 aa11.13□□□□□ -0.63
SYNPO2-201ENST00000307142 MAP3K6O95382 1288 aa11.13□□□□□ -0.63
SYNPO2-201ENST00000307142 COMTP21964 271 aa11.13□□□□□ -0.63
SYNPO2-201ENST00000307142 FAM71DQ8N9W8 422 aa11.13□□□□□ -0.63
SYNPO2-201ENST00000307142 CALML6Q8TD86 181 aa11.13□□□□□ -0.63
SYNPO2-201ENST00000307142 SERPINI1Q99574 410 aa11.13□□□□□ -0.63
SYNPO2-201ENST00000307142 Q9H521 79 aa11.13□□□□□ -0.63
SYNPO2-201ENST00000307142 PAK5Q9P286 719 aa11.13□□□□□ -0.63
SYNPO2-201ENST00000307142 DDX20Q9UHI6 824 aaKnown RBP11.13□□□□□ -0.63
SYNPO2-201ENST00000307142 FAM187AA6NFU0 413 aa11.12□□□□□ -0.63
SYNPO2-201ENST00000307142 MICAL2O94851 1124 aa11.12□□□□□ -0.63
SYNPO2-201ENST00000307142 OR1E1P30953 314 aa11.12□□□□□ -0.63
SYNPO2-201ENST00000307142 DHX34Q14147 1143 aaKnown RBP11.12□□□□□ -0.63
SYNPO2-201ENST00000307142 PABPC1LQ4VXU2 614 aaKnown RBP11.12□□□□□ -0.63
SYNPO2-201ENST00000307142 ZBTB45Q96K62 511 aaPredicted RBP11.12□□□□□ -0.63
SYNPO2-201ENST00000307142 ADGRE3Q9BY15 652 aa11.12□□□□□ -0.63
SYNPO2-201ENST00000307142 FAM208AQ9UK61 1670 aaKnown RBP11.12□□□□□ -0.63
SYNPO2-201ENST00000307142 SPAG7O75391 227 aa11.12□□□□□ -0.63
SYNPO2-201ENST00000307142 ERVK-10P10266 1014 aa11.12□□□□□ -0.63
SYNPO2-201ENST00000307142 EPB42P16452 691 aa11.12□□□□□ -0.63
SYNPO2-201ENST00000307142 UGT3A1Q6NUS8 523 aa11.12□□□□□ -0.63
SYNPO2-201ENST00000307142 NUDCD3Q8IVD9 361 aa11.12□□□□□ -0.63
SYNPO2-201ENST00000307142 ZC3H7BQ9UGR2 993 aaKnown RBP11.12□□□□□ -0.63
SYNPO2-201ENST00000307142 PYGLP06737 847 aa11.12□□□□□ -0.63
SYNPO2-201ENST00000307142 USP17L7P0C7H9 530 aa11.12□□□□□ -0.63
SYNPO2-201ENST00000307142 SLC47A2Q86VL8 602 aa11.12□□□□□ -0.63
SYNPO2-201ENST00000307142 IFNL1Q8IU54 200 aa11.12□□□□□ -0.63
SYNPO2-201ENST00000307142 SENP8Q96LD8 212 aa11.12□□□□□ -0.63
SYNPO2-201ENST00000307142 RGPD5Q99666 1765 aa11.12□□□□□ -0.63
SYNPO2-201ENST00000307142 SEPT4O43236 478 aa11.12□□□□□ -0.63
SYNPO2-201ENST00000307142 SPATA31D3P0C874 917 aa11.12□□□□□ -0.63
SYNPO2-201ENST00000307142 SETSIPP0DME0 302 aa11.12□□□□□ -0.63
SYNPO2-201ENST00000307142 CRYBB1P53674 252 aaPredicted RBP11.12□□□□□ -0.63
SYNPO2-201ENST00000307142 PTPN11Q06124 597 aaPredicted RBP11.12□□□□□ -0.63
SYNPO2-201ENST00000307142 NAPEPLDQ6IQ20 393 aa11.12□□□□□ -0.63
SYNPO2-201ENST00000307142 SPATA31D4Q6ZUB0 917 aa11.12□□□□□ -0.63
SYNPO2-201ENST00000307142 VSIG10LQ86VR7 867 aa11.12□□□□□ -0.63
SYNPO2-201ENST00000307142 MAGEB10Q96LZ2 347 aaPredicted RBP11.12□□□□□ -0.63
SYNPO2-201ENST00000307142 PARD6BQ9BYG5 372 aa11.12□□□□□ -0.63
SYNPO2-201ENST00000307142 OSBPL8Q9BZF1 889 aa11.12□□□□□ -0.63
SYNPO2-201ENST00000307142 NT5MQ9NPB1 228 aa11.12□□□□□ -0.63
SYNPO2-201ENST00000307142 LMO7Q8WWI1 1683 aa11.12□□□□□ -0.63
SYNPO2-201ENST00000307142 NT5C1B-RDH14C9J2C7 533 aa11.12□□□□□ -0.63
SYNPO2-201ENST00000307142 PPFIA2O75334 1257 aa11.12□□□□□ -0.63
SYNPO2-201ENST00000307142 POLBP06746 335 aa11.12□□□□□ -0.63
SYNPO2-201ENST00000307142 MAPTP10636 758 aaKnown RBP11.12□□□□□ -0.63
SYNPO2-201ENST00000307142 PTGER2P43116 358 aa11.12□□□□□ -0.63
SYNPO2-201ENST00000307142 TOB1P50616 345 aaPredicted RBP11.12□□□□□ -0.63
SYNPO2-201ENST00000307142 MORF4L2Q15014 288 aa11.12□□□□□ -0.63
SYNPO2-201ENST00000307142 ACOX1Q15067 660 aa11.12□□□□□ -0.63
SYNPO2-201ENST00000307142 ANKRD20A4Q4UJ75 823 aa11.12□□□□□ -0.63
SYNPO2-201ENST00000307142 ANKRD20A8PQ5CZ79 823 aa11.12□□□□□ -0.63
SYNPO2-201ENST00000307142 FSCBQ5H9T9 825 aa11.12□□□□□ -0.63
SYNPO2-201ENST00000307142 ANKRD20A2Q5SQ80 823 aa11.12□□□□□ -0.63
SYNPO2-201ENST00000307142 ANKRD20A1Q5TYW2 823 aa11.12□□□□□ -0.63
SYNPO2-201ENST00000307142 SYDE1Q6ZW31 735 aaPredicted RBP11.12□□□□□ -0.63
SYNPO2-201ENST00000307142 TEX12Q9BXU0 123 aa11.12□□□□□ -0.63
SYNPO2-201ENST00000307142 GOLPH3Q9H4A6 298 aa11.12□□□□□ -0.63
SYNPO2-201ENST00000307142 AMACRQ9UHK6 382 aa11.12□□□□□ -0.63
SYNPO2-201ENST00000307142 TSPAN16Q9UKR8 245 aa11.12□□□□□ -0.63
SYNPO2-201ENST00000307142 MRPL42Q9Y6G3 142 aaKnown RBP11.12□□□□□ -0.63
SYNPO2-201ENST00000307142 AGRPO00253 132 aa11.11□□□□□ -0.63
SYNPO2-201ENST00000307142 FOXN3O00409 490 aaPredicted RBP11.11□□□□□ -0.63
SYNPO2-201ENST00000307142 CAND2O75155 1236 aa11.11□□□□□ -0.63
SYNPO2-201ENST00000307142 PPM1AP35813 382 aa11.11□□□□□ -0.63
SYNPO2-201ENST00000307142 MDM2Q00987 491 aaPredicted RBP11.11□□□□□ -0.63
SYNPO2-201ENST00000307142 CRHR2Q13324 411 aa11.11□□□□□ -0.63
SYNPO2-201ENST00000307142 DENND5BQ6ZUT9 1274 aa11.11□□□□□ -0.63
SYNPO2-201ENST00000307142 FAM131BQ86XD5 332 aa11.11□□□□□ -0.63
SYNPO2-201ENST00000307142 TRIM55Q9BYV6 548 aa11.11□□□□□ -0.63
SYNPO2-201ENST00000307142 A0A1B0GTH6 734 aa11.11□□□□□ -0.63
SYNPO2-201ENST00000307142 H2AFYO75367 372 aaKnown RBP11.11□□□□□ -0.63
SYNPO2-201ENST00000307142 EFTUD2Q15029 972 aaKnown RBP eCLIP11.11□□□□□ -0.63
SYNPO2-201ENST00000307142 SGO1Q5FBB7 561 aa11.11□□□□□ -0.63
SYNPO2-201ENST00000307142 KIAA0319LQ8IZA0 1049 aa11.11□□□□□ -0.63
SYNPO2-201ENST00000307142 ZCWPW1Q9H0M4 648 aa11.11□□□□□ -0.63
SYNPO2-201ENST00000307142 PORCNQ9H237 461 aa11.11□□□□□ -0.63
SYNPO2-201ENST00000307142 RRAGDQ9NQL2 400 aaPredicted RBP11.11□□□□□ -0.63
SYNPO2-201ENST00000307142 FGFR1OP2Q9NVK5 253 aa11.11□□□□□ -0.63
SYNPO2-201ENST00000307142 HES2Q9Y543 173 aa11.11□□□□□ -0.63
SYNPO2-201ENST00000307142 PPP1R3GB7ZBB8 358 aa11.11□□□□□ -0.63
SYNPO2-201ENST00000307142 OPHN1O60890 802 aa11.11□□□□□ -0.63
SYNPO2-201ENST00000307142 GEMIN4P57678 1058 aaKnown RBP11.11□□□□□ -0.63
SYNPO2-201ENST00000307142 ZNF697Q5TEC3 545 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms