RNA–Protein interactions for RNA: ENST00000306149.11

CSDC2-201, Transcript of cold shock domain containing C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDC2, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-201ENST00000306149 PALM2Q8IXS6 379 aa15.85■□□□□ 0.13
CSDC2-201ENST00000306149 ZNF75CPQ92670 426 aaPredicted RBP15.85■□□□□ 0.13
CSDC2-201ENST00000306149 ANKRD36BP1Q96IX9 119 aa15.85■□□□□ 0.13
CSDC2-201ENST00000306149 ASCC2Q9H1I8 757 aaPredicted RBP15.85■□□□□ 0.13
CSDC2-201ENST00000306149 SLC17A7Q9P2U7 560 aa15.85■□□□□ 0.13
CSDC2-201ENST00000306149 EVPLQ92817 2033 aa15.84■□□□□ 0.13
CSDC2-201ENST00000306149 NOP56O00567 594 aaKnown RBP15.84■□□□□ 0.13
CSDC2-201ENST00000306149 GRAP2O75791 330 aa15.84■□□□□ 0.13
CSDC2-201ENST00000306149 MAP3K6O95382 1288 aa15.84■□□□□ 0.13
CSDC2-201ENST00000306149 CBX6O95503 412 aa15.84■□□□□ 0.13
CSDC2-201ENST00000306149 POLR2BP30876 1174 aaKnown RBP15.84■□□□□ 0.13
CSDC2-201ENST00000306149 ARL4CP56559 192 aa15.84■□□□□ 0.13
CSDC2-201ENST00000306149 EIF3EP60228 445 aaKnown RBP15.84■□□□□ 0.13
CSDC2-201ENST00000306149 HADHQ16836 314 aaKnown RBP15.84■□□□□ 0.13
CSDC2-201ENST00000306149 CDCA2Q69YH5 1023 aaPredicted RBP15.84■□□□□ 0.13
CSDC2-201ENST00000306149 MPZL3Q6UWV2 235 aa15.84■□□□□ 0.13
CSDC2-201ENST00000306149 BBS12Q6ZW61 710 aa15.84■□□□□ 0.13
CSDC2-201ENST00000306149 NPHS2Q9NP85 383 aa15.84■□□□□ 0.13
CSDC2-201ENST00000306149 DCTN4Q9UJW0 460 aa15.84■□□□□ 0.13
CSDC2-201ENST00000306149 STRIP2Q9ULQ0 834 aa15.84■□□□□ 0.13
CSDC2-201ENST00000306149 ITGB3P05106 788 aa15.84■□□□□ 0.13
CSDC2-201ENST00000306149 KRT7P08729 469 aa15.84■□□□□ 0.13
CSDC2-201ENST00000306149 RBP3P10745 1247 aa15.84■□□□□ 0.13
CSDC2-201ENST00000306149 IGBP1P78318 339 aa15.84■□□□□ 0.13
CSDC2-201ENST00000306149 ZNF667Q5HYK9 610 aa15.84■□□□□ 0.13
CSDC2-201ENST00000306149 EP400NLQ6ZTU2 488 aa15.84■□□□□ 0.13
CSDC2-201ENST00000306149 POLNQ7Z5Q5 900 aa15.84■□□□□ 0.13
CSDC2-201ENST00000306149 C1orf127Q8N9H9 656 aa15.84■□□□□ 0.13
CSDC2-201ENST00000306149 TCP10LQ8TDR4 215 aa15.84■□□□□ 0.13
CSDC2-201ENST00000306149 ZNF570Q96NI8 536 aa15.84■□□□□ 0.13
CSDC2-201ENST00000306149 SLC24A2Q9UI40 661 aa15.84■□□□□ 0.13
CSDC2-201ENST00000306149 POLR2AP24928 1970 aaKnown RBP15.84■□□□□ 0.13
CSDC2-201ENST00000306149 DIAPH2O60879 1101 aa15.83■□□□□ 0.13
CSDC2-201ENST00000306149 AVILO75366 819 aa15.83■□□□□ 0.13
CSDC2-201ENST00000306149 DCTN3O75935 186 aa15.83■□□□□ 0.13
CSDC2-201ENST00000306149 ECM2O94769 699 aaPredicted RBP15.83■□□□□ 0.13
CSDC2-201ENST00000306149 ATP2A2P16615 1042 aaKnown RBP15.83■□□□□ 0.13
CSDC2-201ENST00000306149 GCLCP48506 637 aaPredicted RBP15.83■□□□□ 0.13
CSDC2-201ENST00000306149 GRM1Q13255 1194 aa15.83■□□□□ 0.13
CSDC2-201ENST00000306149 VGLL4Q14135 290 aa15.83■□□□□ 0.13
CSDC2-201ENST00000306149 CDO1Q16878 200 aa15.83■□□□□ 0.13
CSDC2-201ENST00000306149 PLEKHG4Q58EX7 1191 aa15.83■□□□□ 0.13
CSDC2-201ENST00000306149 AGGF1Q8N302 714 aaeCLIP15.83■□□□□ 0.13
CSDC2-201ENST00000306149 ATP11CQ8NB49 1132 aa15.83■□□□□ 0.13
CSDC2-201ENST00000306149 SLC4A11Q8NBS3 891 aa15.83■□□□□ 0.13
CSDC2-201ENST00000306149 SPATA18Q8TC71 538 aa15.83■□□□□ 0.13
CSDC2-201ENST00000306149 INPP5DQ92835 1189 aa15.83■□□□□ 0.13
CSDC2-201ENST00000306149 GPR20Q99678 358 aa15.83■□□□□ 0.13
CSDC2-201ENST00000306149 ELOVL4Q9GZR5 314 aa15.83■□□□□ 0.13
CSDC2-201ENST00000306149 NUMBLQ9Y6R0 609 aa15.83■□□□□ 0.13
CSDC2-201ENST00000306149 GPR25O00155 361 aa15.83■□□□□ 0.12
CSDC2-201ENST00000306149 MXD4Q14582 209 aaPredicted RBP15.83■□□□□ 0.12
CSDC2-201ENST00000306149 NAA25Q14CX7 972 aa15.83■□□□□ 0.12
CSDC2-201ENST00000306149 SPDYAQ5MJ70 313 aa15.83■□□□□ 0.12
CSDC2-201ENST00000306149 GADL1Q6ZQY3 521 aa15.83■□□□□ 0.12
CSDC2-201ENST00000306149 PIWIL1Q96J94 861 aaKnown RBP15.83■□□□□ 0.12
CSDC2-201ENST00000306149 PEBP4Q96S96 227 aa15.83■□□□□ 0.12
CSDC2-201ENST00000306149 CDT1Q9H211 546 aa15.83■□□□□ 0.12
CSDC2-201ENST00000306149 PTPRHQ9HD43 1115 aa15.83■□□□□ 0.12
CSDC2-201ENST00000306149 SLC5A4Q9NY91 659 aa15.83■□□□□ 0.12
CSDC2-201ENST00000306149 M0QYV0 167 aa15.82■□□□□ 0.12
CSDC2-201ENST00000306149 USP2O75604 605 aaPredicted RBP15.82■□□□□ 0.12
CSDC2-201ENST00000306149 MICAL2O94851 1124 aa15.82■□□□□ 0.12
CSDC2-201ENST00000306149 EDNRBP24530 442 aa15.82■□□□□ 0.12
CSDC2-201ENST00000306149 SEPT7Q16181 437 aaKnown RBP15.82■□□□□ 0.12
CSDC2-201ENST00000306149 C15orf59Q2T9L4 293 aaPredicted RBP15.82■□□□□ 0.12
CSDC2-201ENST00000306149 FAM102AQ5T9C2 384 aaPredicted RBP15.82■□□□□ 0.12
CSDC2-201ENST00000306149 APOBEC3FQ8IUX4 373 aaKnown RBP15.82■□□□□ 0.12
CSDC2-201ENST00000306149 ANKRD27Q96NW4 1050 aa15.82■□□□□ 0.12
CSDC2-201ENST00000306149 SPATC1LQ9H0A9 340 aa15.82■□□□□ 0.12
CSDC2-201ENST00000306149 RPF1Q9H9Y2 349 aaKnown RBP15.82■□□□□ 0.12
CSDC2-201ENST00000306149 SSU72Q9NP77 194 aaKnown RBP15.82■□□□□ 0.12
CSDC2-201ENST00000306149 USP18Q9UMW8 372 aa15.82■□□□□ 0.12
CSDC2-201ENST00000306149 LACTBL1A8MY62 500 aa15.82■□□□□ 0.12
CSDC2-201ENST00000306149 FZD9O00144 591 aa15.82■□□□□ 0.12
CSDC2-201ENST00000306149 T-ENOLP0DO92 83 aa15.82■□□□□ 0.12
CSDC2-201ENST00000306149 EFCAB12Q6NXP0 572 aa15.82■□□□□ 0.12
CSDC2-201ENST00000306149 C1orf228Q6PIY5 440 aa15.82■□□□□ 0.12
CSDC2-201ENST00000306149 TSHZ1Q6ZSZ6 1077 aa15.82■□□□□ 0.12
CSDC2-201ENST00000306149 PCGF5Q86SE9 256 aa15.82■□□□□ 0.12
CSDC2-201ENST00000306149 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.82■□□□□ 0.12
CSDC2-201ENST00000306149 KCNV2Q8TDN2 545 aa15.82■□□□□ 0.12
CSDC2-201ENST00000306149 C10orf82Q8WW14 230 aa15.82■□□□□ 0.12
CSDC2-201ENST00000306149 PTPRN2Q92932 1015 aa15.82■□□□□ 0.12
CSDC2-201ENST00000306149 PHACTR1Q9C0D0 580 aa15.82■□□□□ 0.12
CSDC2-201ENST00000306149 SSC5DA1L4H1 1573 aa15.82■□□□□ 0.12
CSDC2-201ENST00000306149 ACKR2O00590 384 aa15.81■□□□□ 0.12
CSDC2-201ENST00000306149 B4GALT4O60513 344 aa15.81■□□□□ 0.12
CSDC2-201ENST00000306149 RNF8O76064 485 aa15.81■□□□□ 0.12
CSDC2-201ENST00000306149 PROZP22891 400 aa15.81■□□□□ 0.12
CSDC2-201ENST00000306149 ALDH3A1P30838 453 aa15.81■□□□□ 0.12
CSDC2-201ENST00000306149 PHBP35232 272 aa15.81■□□□□ 0.12
CSDC2-201ENST00000306149 ELK3P41970 407 aa15.81■□□□□ 0.12
CSDC2-201ENST00000306149 PTPN11Q06124 597 aaPredicted RBP15.81■□□□□ 0.12
CSDC2-201ENST00000306149 DPYSL3Q14195 570 aa15.81■□□□□ 0.12
CSDC2-201ENST00000306149 JADE1Q6IE81 842 aa15.81■□□□□ 0.12
CSDC2-201ENST00000306149 ADGRD1Q6QNK2 874 aa15.81■□□□□ 0.12
CSDC2-201ENST00000306149 FBXO16Q8IX29 292 aaPredicted RBP15.81■□□□□ 0.12
CSDC2-201ENST00000306149 PDIK1LQ8N165 341 aa15.81■□□□□ 0.12
CSDC2-201ENST00000306149 DCAKDQ8WVC6 231 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms