RNA–Protein interactions for RNA: ENST00000305366.7

TM4SF1-201, Transcript of transmembrane 4 L six family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM4SF1, Length 1,771 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-201ENST00000305366 USP41Q3LFD5 358 aa8.31□□□□□ -1.08
TM4SF1-201ENST00000305366 FAM153CQ494X1 144 aa8.31□□□□□ -1.08
TM4SF1-201ENST00000305366 ZC2HC1CQ53FD0 456 aaPredicted RBP8.31□□□□□ -1.08
TM4SF1-201ENST00000305366 FAM171A1Q5VUB5 890 aa8.31□□□□□ -1.08
TM4SF1-201ENST00000305366 SLC27A1Q6PCB7 646 aa8.31□□□□□ -1.08
TM4SF1-201ENST00000305366 GJB7Q6PEY0 223 aa8.31□□□□□ -1.08
TM4SF1-201ENST00000305366 ELMSAN1Q6PJG2 1045 aa8.31□□□□□ -1.08
TM4SF1-201ENST00000305366 SLC44A3Q8N4M1 653 aa8.31□□□□□ -1.08
TM4SF1-201ENST00000305366 GSTCDQ8NEC7 633 aa8.31□□□□□ -1.08
TM4SF1-201ENST00000305366 PIK3R5Q8WYR1 880 aa8.31□□□□□ -1.08
TM4SF1-201ENST00000305366 SEC14L1Q92503 715 aa8.31□□□□□ -1.08
TM4SF1-201ENST00000305366 HINFPQ9BQA5 517 aa8.31□□□□□ -1.08
TM4SF1-201ENST00000305366 KIFC3Q9BVG8 833 aa8.31□□□□□ -1.08
TM4SF1-201ENST00000305366 TIPINQ9BVW5 301 aa8.31□□□□□ -1.08
TM4SF1-201ENST00000305366 CAPS2Q9BXY5 557 aa8.31□□□□□ -1.08
TM4SF1-201ENST00000305366 GPR88Q9GZN0 384 aa8.31□□□□□ -1.08
TM4SF1-201ENST00000305366 INTS2Q9H0H0 1204 aaKnown RBP8.31□□□□□ -1.08
TM4SF1-201ENST00000305366 ST6GALNAC4Q9H4F1 302 aa8.31□□□□□ -1.08
TM4SF1-201ENST00000305366 TMEM206Q9H813 350 aa8.31□□□□□ -1.08
TM4SF1-201ENST00000305366 WDR6Q9NNW5 1121 aaKnown RBP8.31□□□□□ -1.08
TM4SF1-201ENST00000305366 APEX2Q9UBZ4 518 aa8.31□□□□□ -1.08
TM4SF1-201ENST00000305366 STK39Q9UEW8 545 aa8.31□□□□□ -1.08
TM4SF1-201ENST00000305366 FAM153AQ9UHL3 310 aa8.31□□□□□ -1.08
TM4SF1-201ENST00000305366 ADAM28Q9UKQ2 775 aa8.31□□□□□ -1.08
TM4SF1-201ENST00000305366 AMFRQ9UKV5 643 aa8.31□□□□□ -1.08
TM4SF1-201ENST00000305366 ZDBF2Q9HCK1 2354 aa8.31□□□□□ -1.08
TM4SF1-201ENST00000305366 KIAA1671Q9BY89 1806 aa8.31□□□□□ -1.08
TM4SF1-201ENST00000305366 A0A1B0GUA9 196 aa8.3□□□□□ -1.08
TM4SF1-201ENST00000305366 ZSCAN5CA6NGD5 496 aaPredicted RBP8.3□□□□□ -1.08
TM4SF1-201ENST00000305366 HIP1RO75146 1068 aa8.3□□□□□ -1.08
TM4SF1-201ENST00000305366 ECHS1P30084 290 aa8.3□□□□□ -1.08
TM4SF1-201ENST00000305366 DNA2P51530 1060 aa8.3□□□□□ -1.08
TM4SF1-201ENST00000305366 CLCN5P51795 746 aa8.3□□□□□ -1.08
TM4SF1-201ENST00000305366 NTHL1P78549 312 aa8.3□□□□□ -1.08
TM4SF1-201ENST00000305366 MYL7Q01449 175 aa8.3□□□□□ -1.08
TM4SF1-201ENST00000305366 PRPF4BQ13523 1007 aaKnown RBP8.3□□□□□ -1.08
TM4SF1-201ENST00000305366 CBWD6Q4V339 395 aa8.3□□□□□ -1.08
TM4SF1-201ENST00000305366 FNDC1Q4ZHG4 1894 aaPredicted RBP8.3□□□□□ -1.08
TM4SF1-201ENST00000305366 CBWD3Q5JTY5 395 aa8.3□□□□□ -1.08
TM4SF1-201ENST00000305366 RTP2Q5QGT7 225 aa8.3□□□□□ -1.08
TM4SF1-201ENST00000305366 CBWD5Q5RIA9 395 aa8.3□□□□□ -1.08
TM4SF1-201ENST00000305366 CWF19L1Q69YN2 538 aaKnown RBP8.3□□□□□ -1.08
TM4SF1-201ENST00000305366 KDM7AQ6ZMT4 941 aa8.3□□□□□ -1.08
TM4SF1-201ENST00000305366 C15orf39Q6ZRI6 1047 aa8.3□□□□□ -1.08
TM4SF1-201ENST00000305366 GRASPQ7Z6J2 395 aaPredicted RBP8.3□□□□□ -1.08
TM4SF1-201ENST00000305366 ZBTB8OSQ8IWT0 167 aa8.3□□□□□ -1.08
TM4SF1-201ENST00000305366 DAW1Q8N136 415 aa8.3□□□□□ -1.08
TM4SF1-201ENST00000305366 LMO3Q8TAP4 145 aa8.3□□□□□ -1.08
TM4SF1-201ENST00000305366 DEPTORQ8TB45 409 aa8.3□□□□□ -1.08
TM4SF1-201ENST00000305366 IFT81Q8WYA0 676 aa8.3□□□□□ -1.08
TM4SF1-201ENST00000305366 BSNDQ8WZ55 320 aa8.3□□□□□ -1.08
TM4SF1-201ENST00000305366 ARL8AQ96BM9 186 aa8.3□□□□□ -1.08
TM4SF1-201ENST00000305366 ZBTB9Q96C00 473 aa8.3□□□□□ -1.08
TM4SF1-201ENST00000305366 ZNF707Q96C28 371 aaPredicted RBP8.3□□□□□ -1.08
TM4SF1-201ENST00000305366 LRRC45Q96CN5 670 aa8.3□□□□□ -1.08
TM4SF1-201ENST00000305366 FAM107BQ9H098 131 aa8.3□□□□□ -1.08
TM4SF1-201ENST00000305366 RXFP1Q9HBX9 757 aa8.3□□□□□ -1.08
TM4SF1-201ENST00000305366 LARSQ9P2J5 1176 aaKnown RBP8.3□□□□□ -1.08
TM4SF1-201ENST00000305366 DPP7Q9UHL4 492 aa8.3□□□□□ -1.08
TM4SF1-201ENST00000305366 FEZ2Q9UHY8 353 aaPredicted RBP8.3□□□□□ -1.08
TM4SF1-201ENST00000305366 ATG2AQ2TAZ0 1938 aa8.3□□□□□ -1.08
TM4SF1-201ENST00000305366 CLUHO75153 1309 aa8.3□□□□□ -1.08
TM4SF1-201ENST00000305366 ESYT3A0FGR9 886 aa8.3□□□□□ -1.08
TM4SF1-201ENST00000305366 KRBA1A5PL33 1030 aa8.3□□□□□ -1.08
TM4SF1-201ENST00000305366 ZNF233A6NK53 670 aa8.3□□□□□ -1.08
TM4SF1-201ENST00000305366 SRRM3A6NNA2 597 aaPredicted RBP8.3□□□□□ -1.08
TM4SF1-201ENST00000305366 TRIM66O15016 1216 aa8.3□□□□□ -1.08
TM4SF1-201ENST00000305366 CCL16O15467 120 aa8.3□□□□□ -1.08
TM4SF1-201ENST00000305366 SART1O43290 800 aaKnown RBP8.3□□□□□ -1.08
TM4SF1-201ENST00000305366 DCNP07585 359 aaKnown RBP8.3□□□□□ -1.08
TM4SF1-201ENST00000305366 KRT13P13646 458 aa8.3□□□□□ -1.08
TM4SF1-201ENST00000305366 IGFBP6P24592 240 aaPredicted RBP8.3□□□□□ -1.08
TM4SF1-201ENST00000305366 OSTNP61366 133 aa8.3□□□□□ -1.08
TM4SF1-201ENST00000305366 POU5F1BQ06416 359 aa8.3□□□□□ -1.08
TM4SF1-201ENST00000305366 PCBP1Q15365 356 aaKnown RBP eCLIP8.3□□□□□ -1.08
TM4SF1-201ENST00000305366 DNAJC21Q5F1R6 531 aaKnown RBP8.3□□□□□ -1.08
TM4SF1-201ENST00000305366 GLRA4Q5JXX5 417 aa8.3□□□□□ -1.08
TM4SF1-201ENST00000305366 SPDYCQ5MJ68 293 aa8.3□□□□□ -1.08
TM4SF1-201ENST00000305366 EEF1DP3Q658K8 133 aa8.3□□□□□ -1.08
TM4SF1-201ENST00000305366 FOXR1Q6PIV2 292 aa8.3□□□□□ -1.08
TM4SF1-201ENST00000305366 PADI6Q6TGC4 694 aa8.3□□□□□ -1.08
TM4SF1-201ENST00000305366 INTS8Q75QN2 995 aaKnown RBP8.3□□□□□ -1.08
TM4SF1-201ENST00000305366 MAATS1Q7Z4T9 603 aa8.3□□□□□ -1.08
TM4SF1-201ENST00000305366 DAAM2Q86T65 1068 aa8.3□□□□□ -1.08
TM4SF1-201ENST00000305366 KLHL7Q8IXQ5 586 aa8.3□□□□□ -1.08
TM4SF1-201ENST00000305366 CCDC26Q8TAB7 109 aa8.3□□□□□ -1.08
TM4SF1-201ENST00000305366 CXorf38Q8TB03 319 aa8.3□□□□□ -1.08
TM4SF1-201ENST00000305366 GPR152Q8TDT2 470 aa8.3□□□□□ -1.08
TM4SF1-201ENST00000305366 CTNNBL1Q8WYA6 563 aaPredicted RBP8.3□□□□□ -1.08
TM4SF1-201ENST00000305366 CARD9Q9H257 536 aa8.3□□□□□ -1.08
TM4SF1-201ENST00000305366 PDZD7Q9H5P4 517 aa8.3□□□□□ -1.08
TM4SF1-201ENST00000305366 CHST7Q9NS84 486 aa8.3□□□□□ -1.08
TM4SF1-201ENST00000305366 PRMT7Q9NVM4 692 aaPredicted RBP8.3□□□□□ -1.08
TM4SF1-201ENST00000305366 IGSF9Q9P2J2 1179 aa8.3□□□□□ -1.08
TM4SF1-201ENST00000305366 KLHL42Q9P2K6 505 aa8.3□□□□□ -1.08
TM4SF1-201ENST00000305366 DUSP12Q9UNI6 340 aa8.3□□□□□ -1.08
TM4SF1-201ENST00000305366 NUB1Q9Y5A7 615 aa8.3□□□□□ -1.08
TM4SF1-201ENST00000305366 TMCO5BA8MYB1 307 aa8.29□□□□□ -1.08
TM4SF1-201ENST00000305366 I3L4J1 428 aa8.29□□□□□ -1.08
TM4SF1-201ENST00000305366 KRIT1O00522 736 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms