RNA–Protein interactions for RNA: ENST00000303758.7

HMGN1P35-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 35, humanhuman

BASIC

Gene HMGN1P35, Length 594 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P35-201ENST00000303758 LMNAP02545 664 aaKnown RBP11.57□□□□□ -0.56
HMGN1P35-201ENST00000303758 C4BPAP04003 597 aaKnown RBP11.57□□□□□ -0.56
HMGN1P35-201ENST00000303758 TRIM49P0CI25 452 aa11.57□□□□□ -0.56
HMGN1P35-201ENST00000303758 TRIM49CP0CI26 452 aa11.57□□□□□ -0.56
HMGN1P35-201ENST00000303758 IFNAR2P48551 515 aa11.57□□□□□ -0.56
HMGN1P35-201ENST00000303758 CLDN10P78369 228 aa11.57□□□□□ -0.56
HMGN1P35-201ENST00000303758 FAM160A1Q05DH4 1040 aa11.57□□□□□ -0.56
HMGN1P35-201ENST00000303758 TNK2Q07912 1038 aa11.57□□□□□ -0.56
HMGN1P35-201ENST00000303758 MTAPQ13126 283 aa11.57□□□□□ -0.56
HMGN1P35-201ENST00000303758 PNOCQ13519 176 aa11.57□□□□□ -0.56
HMGN1P35-201ENST00000303758 ZNF268Q14587 947 aaPredicted RBP11.57□□□□□ -0.56
HMGN1P35-201ENST00000303758 PON2Q15165 354 aa11.57□□□□□ -0.56
HMGN1P35-201ENST00000303758 NFIL3Q16649 462 aa11.57□□□□□ -0.56
HMGN1P35-201ENST00000303758 SGSM1Q2NKQ1 1148 aa11.57□□□□□ -0.56
HMGN1P35-201ENST00000303758 ZNF528Q3MIS6 628 aa11.57□□□□□ -0.56
HMGN1P35-201ENST00000303758 ZACNQ401N2 412 aa11.57□□□□□ -0.56
HMGN1P35-201ENST00000303758 CCDC150Q8NCX0 1101 aa11.57□□□□□ -0.56
HMGN1P35-201ENST00000303758 ATRIPQ8WXE1 791 aa11.57□□□□□ -0.56
HMGN1P35-201ENST00000303758 TAF4BQ92750 862 aa11.57□□□□□ -0.56
HMGN1P35-201ENST00000303758 C8orf48Q96LL4 319 aa11.57□□□□□ -0.56
HMGN1P35-201ENST00000303758 SLITRK1Q96PX8 696 aa11.57□□□□□ -0.56
HMGN1P35-201ENST00000303758 ZNF518BQ9C0D4 1074 aa11.57□□□□□ -0.56
HMGN1P35-201ENST00000303758 EBF3Q9H4W6 596 aa11.57□□□□□ -0.56
HMGN1P35-201ENST00000303758 GKN1Q9NS71 199 aa11.57□□□□□ -0.56
HMGN1P35-201ENST00000303758 C2orf78A6NCI8 922 aa11.56□□□□□ -0.56
HMGN1P35-201ENST00000303758 SHISA7A6NL88 538 aa11.56□□□□□ -0.56
HMGN1P35-201ENST00000303758 CLDN5O00501 218 aa11.56□□□□□ -0.56
HMGN1P35-201ENST00000303758 VNN1O95497 513 aa11.56□□□□□ -0.56
HMGN1P35-201ENST00000303758 HLA-DRAP01903 254 aa11.56□□□□□ -0.56
HMGN1P35-201ENST00000303758 HDCP19113 662 aa11.56□□□□□ -0.56
HMGN1P35-201ENST00000303758 PSMC2P35998 433 aaKnown RBP11.56□□□□□ -0.56
HMGN1P35-201ENST00000303758 CCR3P51677 355 aa11.56□□□□□ -0.56
HMGN1P35-201ENST00000303758 NOP14P78316 857 aaKnown RBP11.56□□□□□ -0.56
HMGN1P35-201ENST00000303758 AMPD2Q01433 879 aa11.56□□□□□ -0.56
HMGN1P35-201ENST00000303758 ADAM9Q13443 819 aa11.56□□□□□ -0.56
HMGN1P35-201ENST00000303758 RUNX3Q13761 415 aa11.56□□□□□ -0.56
HMGN1P35-201ENST00000303758 MTF1Q14872 753 aa11.56□□□□□ -0.56
HMGN1P35-201ENST00000303758 PDGFRLQ15198 375 aa11.56□□□□□ -0.56
HMGN1P35-201ENST00000303758 DGKKQ5KSL6 1271 aa11.56□□□□□ -0.56
HMGN1P35-201ENST00000303758 TRIM68Q6AZZ1 485 aa11.56□□□□□ -0.56
HMGN1P35-201ENST00000303758 TSSK4Q6SA08 328 aa11.56□□□□□ -0.56
HMGN1P35-201ENST00000303758 SV2AQ7L0J3 742 aa11.56□□□□□ -0.56
HMGN1P35-201ENST00000303758 SMYD4Q8IYR2 804 aaPredicted RBP11.56□□□□□ -0.56
HMGN1P35-201ENST00000303758 MAML2Q8IZL2 1156 aaPredicted RBP11.56□□□□□ -0.56
HMGN1P35-201ENST00000303758 FMR1NBQ8N0W7 255 aaPredicted RBP11.56□□□□□ -0.56
HMGN1P35-201ENST00000303758 ADSSL1Q8N142 457 aa11.56□□□□□ -0.56
HMGN1P35-201ENST00000303758 CPA6Q8N4T0 437 aa11.56□□□□□ -0.56
HMGN1P35-201ENST00000303758 ARL14EPQ8N8R7 260 aaPredicted RBP11.56□□□□□ -0.56
HMGN1P35-201ENST00000303758 EXOC4Q96A65 974 aa11.56□□□□□ -0.56
HMGN1P35-201ENST00000303758 ELMO3Q96BJ8 720 aa11.56□□□□□ -0.56
HMGN1P35-201ENST00000303758 TSG101Q99816 390 aa11.56□□□□□ -0.56
HMGN1P35-201ENST00000303758 B3GNT5Q9BYG0 378 aa11.56□□□□□ -0.56
HMGN1P35-201ENST00000303758 DNAI2Q9GZS0 605 aa11.56□□□□□ -0.56
HMGN1P35-201ENST00000303758 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.56□□□□□ -0.56
HMGN1P35-201ENST00000303758 PRMT8Q9NR22 394 aaPredicted RBP11.56□□□□□ -0.56
HMGN1P35-201ENST00000303758 NME7Q9Y5B8 376 aa11.56□□□□□ -0.56
HMGN1P35-201ENST00000303758 CACNA1IQ9P0X4 2223 aa11.55□□□□□ -0.56
HMGN1P35-201ENST00000303758 CETN3O15182 167 aa11.55□□□□□ -0.56
HMGN1P35-201ENST00000303758 AKAP3O75969 853 aa11.55□□□□□ -0.56
HMGN1P35-201ENST00000303758 RTN3O95197 1032 aaPredicted RBP11.55□□□□□ -0.56
HMGN1P35-201ENST00000303758 EPB41P11171 864 aaKnown RBP11.55□□□□□ -0.56
HMGN1P35-201ENST00000303758 CHRNB1P11230 501 aa11.55□□□□□ -0.56
HMGN1P35-201ENST00000303758 PPP3CCP48454 512 aa11.55□□□□□ -0.56
HMGN1P35-201ENST00000303758 GCLMP48507 274 aa11.55□□□□□ -0.56
HMGN1P35-201ENST00000303758 VASPP50552 380 aaPredicted RBP11.55□□□□□ -0.56
HMGN1P35-201ENST00000303758 NRLP54845 237 aa11.55□□□□□ -0.56
HMGN1P35-201ENST00000303758 USP46P62068 366 aa11.55□□□□□ -0.56
HMGN1P35-201ENST00000303758 USP4Q13107 963 aa11.55□□□□□ -0.56
HMGN1P35-201ENST00000303758 FZD5Q13467 585 aa11.55□□□□□ -0.56
HMGN1P35-201ENST00000303758 EDRF1Q3B7T1 1238 aa11.55□□□□□ -0.56
HMGN1P35-201ENST00000303758 SPOPLQ6IQ16 392 aa11.55□□□□□ -0.56
HMGN1P35-201ENST00000303758 TXNDC11Q6PKC3 985 aa11.55□□□□□ -0.56
HMGN1P35-201ENST00000303758 ACOT1Q86TX2 421 aa11.55□□□□□ -0.56
HMGN1P35-201ENST00000303758 FAM35AQ86V20 835 aa11.55□□□□□ -0.56
HMGN1P35-201ENST00000303758 NUP93Q8N1F7 819 aa11.55□□□□□ -0.56
HMGN1P35-201ENST00000303758 SMARCE1Q969G3 411 aa11.55□□□□□ -0.56
HMGN1P35-201ENST00000303758 FBXO32Q969P5 355 aa11.55□□□□□ -0.56
HMGN1P35-201ENST00000303758 SMARCD1Q96GM5 515 aa11.55□□□□□ -0.56
HMGN1P35-201ENST00000303758 SLC22A12Q96S37 553 aa11.55□□□□□ -0.56
HMGN1P35-201ENST00000303758 CYP2S1Q96SQ9 504 aa11.55□□□□□ -0.56
HMGN1P35-201ENST00000303758 FAM83CQ9BQN1 747 aa11.55□□□□□ -0.56
HMGN1P35-201ENST00000303758 TTLL2Q9BWV7 592 aa11.55□□□□□ -0.56
HMGN1P35-201ENST00000303758 DMAP1Q9NPF5 467 aaPredicted RBP11.55□□□□□ -0.56
HMGN1P35-201ENST00000303758 RBM12Q9NTZ6 932 aaKnown RBP11.55□□□□□ -0.56
HMGN1P35-201ENST00000303758 ZSCAN32Q9NX65 697 aa11.55□□□□□ -0.56
HMGN1P35-201ENST00000303758 DUS2Q9NX74 493 aaKnown RBP11.55□□□□□ -0.56
HMGN1P35-201ENST00000303758 PCDHGA2Q9Y5H1 932 aa11.55□□□□□ -0.56
HMGN1P35-201ENST00000303758 STX10O60499 249 aa11.54□□□□□ -0.56
HMGN1P35-201ENST00000303758 AP1G2O75843 785 aa11.54□□□□□ -0.56
HMGN1P35-201ENST00000303758 ASS1P00966 412 aaKnown RBP11.54□□□□□ -0.56
HMGN1P35-201ENST00000303758 ARSAP15289 507 aa11.54□□□□□ -0.56
HMGN1P35-201ENST00000303758 PFKLP17858 780 aa11.54□□□□□ -0.56
HMGN1P35-201ENST00000303758 YWHAQP27348 245 aa11.54□□□□□ -0.56
HMGN1P35-201ENST00000303758 CXCL12P48061 93 aa11.54□□□□□ -0.56
HMGN1P35-201ENST00000303758 NDST1P52848 882 aa11.54□□□□□ -0.56
HMGN1P35-201ENST00000303758 CACNA2D1P54289 1103 aa11.54□□□□□ -0.56
HMGN1P35-201ENST00000303758 GRSF1Q12849 480 aaKnown RBP eCLIP11.54□□□□□ -0.56
HMGN1P35-201ENST00000303758 TAF10Q12962 218 aa11.54□□□□□ -0.56
HMGN1P35-201ENST00000303758 ORC1Q13415 861 aa11.54□□□□□ -0.56
HMGN1P35-201ENST00000303758 STIM1Q13586 685 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms