RNA–Protein interactions for RNA: ENST00000303395.8

SCN1A-201, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN1A, Length 8,533 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-201ENST00000303395 EME1Q96AY2 570 aa5.44□□□□□ -1.54
SCN1A-201ENST00000303395 APOPT1Q96IL0 206 aa5.44□□□□□ -1.54
SCN1A-201ENST00000303395 ISCA1Q9BUE6 129 aa5.44□□□□□ -1.54
SCN1A-201ENST00000303395 CORO2BQ9UQ03 480 aa5.44□□□□□ -1.54
SCN1A-201ENST00000303395 TPRKBQ9Y3C4 175 aa5.44□□□□□ -1.54
SCN1A-201ENST00000303395 MYH14Q7Z406 1995 aaKnown RBP5.43□□□□□ -1.54
SCN1A-201ENST00000303395 MYH6P13533 1939 aa5.43□□□□□ -1.54
SCN1A-201ENST00000303395 DPYSL4O14531 572 aa5.43□□□□□ -1.54
SCN1A-201ENST00000303395 SNX3O60493 162 aa5.43□□□□□ -1.54
SCN1A-201ENST00000303395 DGAT1O75907 488 aa5.43□□□□□ -1.54
SCN1A-201ENST00000303395 FAM200BP0CF97 657 aa5.43□□□□□ -1.54
SCN1A-201ENST00000303395 UMPSP11172 480 aa5.43□□□□□ -1.54
SCN1A-201ENST00000303395 COL6A2P12110 1019 aa5.43□□□□□ -1.54
SCN1A-201ENST00000303395 UCHL3P15374 230 aa5.43□□□□□ -1.54
SCN1A-201ENST00000303395 TGM2P21980 687 aa5.43□□□□□ -1.54
SCN1A-201ENST00000303395 S100GP29377 79 aa5.43□□□□□ -1.54
SCN1A-201ENST00000303395 STAT3P40763 770 aa5.43□□□□□ -1.54
SCN1A-201ENST00000303395 ZNF200P98182 395 aaPredicted RBP5.43□□□□□ -1.54
SCN1A-201ENST00000303395 NFX1Q12986 1120 aaKnown RBP5.43□□□□□ -1.54
SCN1A-201ENST00000303395 DGUOKQ16854 277 aa5.43□□□□□ -1.54
SCN1A-201ENST00000303395 CLEC16AQ2KHT3 1053 aa5.43□□□□□ -1.54
SCN1A-201ENST00000303395 DNAAF3Q8N9W5 541 aa5.43□□□□□ -1.54
SCN1A-201ENST00000303395 GLG1Q92896 1179 aa5.43□□□□□ -1.54
SCN1A-201ENST00000303395 SGF29Q96ES7 293 aa5.43□□□□□ -1.54
SCN1A-201ENST00000303395 TRIM54Q9BYV2 358 aa5.43□□□□□ -1.54
SCN1A-201ENST00000303395 CYP3A43Q9HB55 503 aa5.43□□□□□ -1.54
SCN1A-201ENST00000303395 TMEM8AQ9HCN3 771 aa5.43□□□□□ -1.54
SCN1A-201ENST00000303395 CCDC177Q9NQR7 707 aaPredicted RBP5.43□□□□□ -1.54
SCN1A-201ENST00000303395 ADAM22Q9P0K1 906 aa5.43□□□□□ -1.54
SCN1A-201ENST00000303395 TMCC3Q9ULS5 477 aa5.43□□□□□ -1.54
SCN1A-201ENST00000303395 STXBP5LQ9Y2K9 1186 aa5.43□□□□□ -1.54
SCN1A-201ENST00000303395 RWDD3Q9Y3V2 267 aa5.43□□□□□ -1.54
SCN1A-201ENST00000303395 MON2Q7Z3U7 1717 aa5.43□□□□□ -1.54
SCN1A-201ENST00000303395 PLK4O00444 970 aa5.43□□□□□ -1.54
SCN1A-201ENST00000303395 ALDH1A2O94788 518 aa5.43□□□□□ -1.54
SCN1A-201ENST00000303395 ADAMTS2O95450 1211 aa5.43□□□□□ -1.54
SCN1A-201ENST00000303395 FYNP06241 537 aa5.43□□□□□ -1.54
SCN1A-201ENST00000303395 MLNP12872 115 aa5.43□□□□□ -1.54
SCN1A-201ENST00000303395 FOSL2P15408 326 aa5.43□□□□□ -1.54
SCN1A-201ENST00000303395 OTUD4Q01804 1114 aaKnown RBP5.43□□□□□ -1.54
SCN1A-201ENST00000303395 PDK1Q15118 436 aa5.43□□□□□ -1.54
SCN1A-201ENST00000303395 IZUMO3Q5VZ72 239 aa5.43□□□□□ -1.54
SCN1A-201ENST00000303395 DPY19L2Q6NUT2 758 aa5.43□□□□□ -1.54
SCN1A-201ENST00000303395 EXOC3L1Q86VI1 746 aa5.43□□□□□ -1.54
SCN1A-201ENST00000303395 ZCCHC9Q8N567 271 aaKnown RBP5.43□□□□□ -1.54
SCN1A-201ENST00000303395 RNF139Q8WU17 664 aa5.43□□□□□ -1.54
SCN1A-201ENST00000303395 LENG1Q96BZ8 264 aaPredicted RBP5.43□□□□□ -1.54
SCN1A-201ENST00000303395 DYDC2Q96IM9 177 aa5.43□□□□□ -1.54
SCN1A-201ENST00000303395 TINF2Q9BSI4 451 aa5.43□□□□□ -1.54
SCN1A-201ENST00000303395 ZNF556Q9HAH1 456 aa5.43□□□□□ -1.54
SCN1A-201ENST00000303395 ZNF451Q9Y4E5 1061 aa5.43□□□□□ -1.54
SCN1A-201ENST00000303395 UMODL1Q5DID0 1318 aa5.43□□□□□ -1.54
SCN1A-201ENST00000303395 MYO7AQ13402 2215 aa5.43□□□□□ -1.54
SCN1A-201ENST00000303395 NBPF26B4DH59 902 aa5.43□□□□□ -1.54
SCN1A-201ENST00000303395 KLHL18O94889 574 aa5.43□□□□□ -1.54
SCN1A-201ENST00000303395 ATP1A1P05023 1023 aaKnown RBP5.43□□□□□ -1.54
SCN1A-201ENST00000303395 PROZP22891 400 aa5.43□□□□□ -1.54
SCN1A-201ENST00000303395 YWHAQP27348 245 aa5.43□□□□□ -1.54
SCN1A-201ENST00000303395 STAT5AP42229 794 aa5.43□□□□□ -1.54
SCN1A-201ENST00000303395 STAT5BP51692 787 aa5.43□□□□□ -1.54
SCN1A-201ENST00000303395 CWF19L1Q69YN2 538 aaKnown RBP5.43□□□□□ -1.54
SCN1A-201ENST00000303395 PACS1Q6VY07 963 aa5.43□□□□□ -1.54
SCN1A-201ENST00000303395 LRRC59Q96AG4 307 aaKnown RBP5.43□□□□□ -1.54
SCN1A-201ENST00000303395 AGBL1Q96MI9 1066 aa5.43□□□□□ -1.54
SCN1A-201ENST00000303395 KIFC1Q9BW19 673 aa5.43□□□□□ -1.54
SCN1A-201ENST00000303395 C1orf21Q9H246 121 aa5.43□□□□□ -1.54
SCN1A-201ENST00000303395 DPH5Q9H2P9 285 aa5.43□□□□□ -1.54
SCN1A-201ENST00000303395 ZBTB3Q9H5J0 574 aa5.43□□□□□ -1.54
SCN1A-201ENST00000303395 RCOR3Q9P2K3 495 aaPredicted RBP5.43□□□□□ -1.54
SCN1A-201ENST00000303395 SEC14L4Q9UDX3 406 aa5.43□□□□□ -1.54
SCN1A-201ENST00000303395 ITGA11Q9UKX5 1188 aa5.43□□□□□ -1.54
SCN1A-201ENST00000303395 PDE4DIPQ5VU43 2346 aa5.43□□□□□ -1.54
SCN1A-201ENST00000303395 LRRIQ4A6NIV6 560 aa5.43□□□□□ -1.54
SCN1A-201ENST00000303395 KPNA3O00505 521 aaPredicted RBP5.43□□□□□ -1.54
SCN1A-201ENST00000303395 ZW10O43264 779 aa5.43□□□□□ -1.54
SCN1A-201ENST00000303395 DYRK3O43781 588 aa5.43□□□□□ -1.54
SCN1A-201ENST00000303395 F9P00740 461 aa5.43□□□□□ -1.54
SCN1A-201ENST00000303395 SERPINE1P05121 402 aa5.43□□□□□ -1.54
SCN1A-201ENST00000303395 PSAPP07602 524 aa5.43□□□□□ -1.54
SCN1A-201ENST00000303395 MSL3P1P0C860 447 aa5.43□□□□□ -1.54
SCN1A-201ENST00000303395 RPA1P27694 616 aa5.43□□□□□ -1.54
SCN1A-201ENST00000303395 HNMTP50135 292 aa5.43□□□□□ -1.54
SCN1A-201ENST00000303395 COASYQ13057 564 aa5.43□□□□□ -1.54
SCN1A-201ENST00000303395 ANKS6Q68DC2 871 aa5.43□□□□□ -1.54
SCN1A-201ENST00000303395 TTI2Q6NXR4 508 aa5.43□□□□□ -1.54
SCN1A-201ENST00000303395 TUBA3EQ6PEY2 450 aa5.43□□□□□ -1.54
SCN1A-201ENST00000303395 PIK3C3Q8NEB9 887 aa5.43□□□□□ -1.54
SCN1A-201ENST00000303395 PLEKHA8Q96JA3 519 aa5.43□□□□□ -1.54
SCN1A-201ENST00000303395 EHD4Q9H223 541 aa5.43□□□□□ -1.54
SCN1A-201ENST00000303395 MRM3Q9HC36 420 aaKnown RBP5.43□□□□□ -1.54
SCN1A-201ENST00000303395 TOPORSQ9NS56 1045 aaPredicted RBP5.43□□□□□ -1.54
SCN1A-201ENST00000303395 MPOP05164 745 aa5.43□□□□□ -1.54
SCN1A-201ENST00000303395 PBX1P40424 430 aa5.43□□□□□ -1.54
SCN1A-201ENST00000303395 CHN2P52757 468 aa5.43□□□□□ -1.54
SCN1A-201ENST00000303395 UBE3AQ05086 875 aa5.43□□□□□ -1.54
SCN1A-201ENST00000303395 ABRQ12979 859 aa5.43□□□□□ -1.54
SCN1A-201ENST00000303395 ITGADQ13349 1161 aa5.43□□□□□ -1.54
SCN1A-201ENST00000303395 ANO4Q32M45 955 aa5.43□□□□□ -1.54
SCN1A-201ENST00000303395 BICRALQ6AI39 1079 aa5.43□□□□□ -1.54
SCN1A-201ENST00000303395 TTBK2Q6IQ55 1244 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 113.1 ms