RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.06□□□□□ -0.16
CHRFAM7A-201ENST00000299847 F8W810 466 aa14.06□□□□□ -0.16
CHRFAM7A-201ENST00000299847 M0R3G1 203 aa14.06□□□□□ -0.16
CHRFAM7A-201ENST00000299847 USP1O94782 785 aa14.06□□□□□ -0.16
CHRFAM7A-201ENST00000299847 ODC1P11926 461 aa14.06□□□□□ -0.16
CHRFAM7A-201ENST00000299847 RPS7P62081 194 aaKnown RBP14.06□□□□□ -0.16
CHRFAM7A-201ENST00000299847 ZNF177Q13360 481 aaPredicted RBP14.06□□□□□ -0.16
CHRFAM7A-201ENST00000299847 ZNF34Q8IZ26 560 aa14.06□□□□□ -0.16
CHRFAM7A-201ENST00000299847 SGSM3Q96HU1 749 aa14.06□□□□□ -0.16
CHRFAM7A-201ENST00000299847 PRPF18Q99633 342 aaKnown RBP14.06□□□□□ -0.16
CHRFAM7A-201ENST00000299847 RHBDL2Q9NX52 303 aa14.06□□□□□ -0.16
CHRFAM7A-201ENST00000299847 CASTOR2A6NHX0 329 aa14.06□□□□□ -0.16
CHRFAM7A-201ENST00000299847 MAGEB2O15479 319 aa14.06□□□□□ -0.16
CHRFAM7A-201ENST00000299847 RASSF9O75901 435 aa14.06□□□□□ -0.16
CHRFAM7A-201ENST00000299847 TCF3P15923 654 aa14.06□□□□□ -0.16
CHRFAM7A-201ENST00000299847 ALOX15P16050 662 aaPredicted RBP14.06□□□□□ -0.16
CHRFAM7A-201ENST00000299847 RPA1P27694 616 aa14.06□□□□□ -0.16
CHRFAM7A-201ENST00000299847 PCSK1P29120 753 aa14.06□□□□□ -0.16
CHRFAM7A-201ENST00000299847 HUNKP57058 714 aa14.06□□□□□ -0.16
CHRFAM7A-201ENST00000299847 EZH2Q15910 746 aaKnown RBP14.06□□□□□ -0.16
CHRFAM7A-201ENST00000299847 EML3Q32P44 896 aa14.06□□□□□ -0.16
CHRFAM7A-201ENST00000299847 SDE2Q6IQ49 451 aa14.06□□□□□ -0.16
CHRFAM7A-201ENST00000299847 TTC33Q6PID6 262 aaPredicted RBP14.06□□□□□ -0.16
CHRFAM7A-201ENST00000299847 SLC20A1Q8WUM9 679 aa14.06□□□□□ -0.16
CHRFAM7A-201ENST00000299847 CRAMP1Q96RY5 1269 aa14.06□□□□□ -0.16
CHRFAM7A-201ENST00000299847 CBWD1Q9BRT8 395 aa14.06□□□□□ -0.16
CHRFAM7A-201ENST00000299847 FICDQ9BVA6 458 aa14.06□□□□□ -0.16
CHRFAM7A-201ENST00000299847 SCN3BQ9NY72 215 aa14.06□□□□□ -0.16
CHRFAM7A-201ENST00000299847 STX7O15400 261 aaKnown RBP14.06□□□□□ -0.16
CHRFAM7A-201ENST00000299847 POU1F1P28069 291 aa14.06□□□□□ -0.16
CHRFAM7A-201ENST00000299847 PRIM2P49643 509 aa14.06□□□□□ -0.16
CHRFAM7A-201ENST00000299847 COPAP53621 1224 aa14.06□□□□□ -0.16
CHRFAM7A-201ENST00000299847 P3H2Q8IVL5 708 aa14.06□□□□□ -0.16
CHRFAM7A-201ENST00000299847 EMC1Q8N766 993 aa14.06□□□□□ -0.16
CHRFAM7A-201ENST00000299847 USP13Q92995 863 aaPredicted RBP14.06□□□□□ -0.16
CHRFAM7A-201ENST00000299847 OLFML3Q9NRN5 406 aa14.06□□□□□ -0.16
CHRFAM7A-201ENST00000299847 GIMAP4Q9NUV9 329 aa14.06□□□□□ -0.16
CHRFAM7A-201ENST00000299847 USP20Q9Y2K6 914 aa14.06□□□□□ -0.16
CHRFAM7A-201ENST00000299847 TIMM13Q9Y5L4 95 aaPredicted RBP14.06□□□□□ -0.16
CHRFAM7A-201ENST00000299847 CDC42BPBQ9Y5S2 1711 aa14.06□□□□□ -0.16
CHRFAM7A-201ENST00000299847 A0A1W2PQJ5 194 aa14.05□□□□□ -0.16
CHRFAM7A-201ENST00000299847 HBP1O60381 514 aa14.05□□□□□ -0.16
CHRFAM7A-201ENST00000299847 MAPRE1Q15691 268 aaKnown RBP14.05□□□□□ -0.16
CHRFAM7A-201ENST00000299847 TKFCQ3LXA3 575 aa14.05□□□□□ -0.16
CHRFAM7A-201ENST00000299847 CENPLQ8N0S6 344 aaPredicted RBP14.05□□□□□ -0.16
CHRFAM7A-201ENST00000299847 ENTPD7Q9NQZ7 604 aa14.05□□□□□ -0.16
CHRFAM7A-201ENST00000299847 RIC8BQ9NVN3 520 aa14.05□□□□□ -0.16
CHRFAM7A-201ENST00000299847 TBX3O15119 743 aa14.05□□□□□ -0.16
CHRFAM7A-201ENST00000299847 STRNO43815 780 aa14.05□□□□□ -0.16
CHRFAM7A-201ENST00000299847 DLGAP3O95886 979 aa14.05□□□□□ -0.16
CHRFAM7A-201ENST00000299847 ZNF23P17027 643 aa14.05□□□□□ -0.16
CHRFAM7A-201ENST00000299847 CPT1AP50416 773 aa14.05□□□□□ -0.16
CHRFAM7A-201ENST00000299847 FXR2P51116 673 aaKnown RBP eCLIP14.05□□□□□ -0.16
CHRFAM7A-201ENST00000299847 EFEMP1Q12805 493 aa14.05□□□□□ -0.16
CHRFAM7A-201ENST00000299847 CYP51A1Q16850 503 aa14.05□□□□□ -0.16
CHRFAM7A-201ENST00000299847 NAPEPLDQ6IQ20 393 aa14.05□□□□□ -0.16
CHRFAM7A-201ENST00000299847 TRAF7Q6Q0C0 670 aa14.05□□□□□ -0.16
CHRFAM7A-201ENST00000299847 TRAPPC11Q7Z392 1133 aa14.05□□□□□ -0.16
CHRFAM7A-201ENST00000299847 SLC13A5Q86YT5 568 aaPredicted RBP14.05□□□□□ -0.16
CHRFAM7A-201ENST00000299847 TEX9Q8N6V9 391 aa14.05□□□□□ -0.16
CHRFAM7A-201ENST00000299847 FAM172AQ8WUF8 416 aa14.05□□□□□ -0.16
CHRFAM7A-201ENST00000299847 RUBCNQ92622 972 aa14.05□□□□□ -0.16
CHRFAM7A-201ENST00000299847 OSGEPQ9NPF4 335 aa14.05□□□□□ -0.16
CHRFAM7A-201ENST00000299847 EVPLLA8MZ36 301 aa14.05□□□□□ -0.16
CHRFAM7A-201ENST00000299847 E9PBE3 544 aa14.05□□□□□ -0.16
CHRFAM7A-201ENST00000299847 CYB561D2O14569 222 aa14.05□□□□□ -0.16
CHRFAM7A-201ENST00000299847 RGS5O15539 181 aa14.05□□□□□ -0.16
CHRFAM7A-201ENST00000299847 KLHL41O60662 606 aa14.05□□□□□ -0.16
CHRFAM7A-201ENST00000299847 ZCCHC18P0CG32 403 aa14.05□□□□□ -0.16
CHRFAM7A-201ENST00000299847 ALDH7A1P49419 539 aaKnown RBP14.05□□□□□ -0.16
CHRFAM7A-201ENST00000299847 POTEAQ6S8J7 498 aa14.05□□□□□ -0.16
CHRFAM7A-201ENST00000299847 PRMT7Q9NVM4 692 aaPredicted RBP14.05□□□□□ -0.16
CHRFAM7A-201ENST00000299847 ADCY10Q96PN6 1610 aa14.05□□□□□ -0.16
CHRFAM7A-201ENST00000299847 MEI4A8MW99 385 aa14.05□□□□□ -0.16
CHRFAM7A-201ENST00000299847 NDUFB5O43674 189 aa14.05□□□□□ -0.16
CHRFAM7A-201ENST00000299847 NTSR2O95665 410 aa14.05□□□□□ -0.16
CHRFAM7A-201ENST00000299847 PYGMP11217 842 aa14.05□□□□□ -0.16
CHRFAM7A-201ENST00000299847 IRAK1P51617 712 aa14.05□□□□□ -0.16
CHRFAM7A-201ENST00000299847 ATN1P54259 1190 aaPredicted RBP14.05□□□□□ -0.16
CHRFAM7A-201ENST00000299847 BMPR2Q13873 1038 aa14.05□□□□□ -0.16
CHRFAM7A-201ENST00000299847 ZSWIM1Q9BR11 485 aa14.05□□□□□ -0.16
CHRFAM7A-201ENST00000299847 PLA2G12BQ9BX93 195 aa14.05□□□□□ -0.16
CHRFAM7A-201ENST00000299847 NSMCE4AQ9NXX6 385 aa14.05□□□□□ -0.16
CHRFAM7A-201ENST00000299847 TUBE1Q9UJT0 475 aa14.05□□□□□ -0.16
CHRFAM7A-201ENST00000299847 CDY2AQ9Y6F7 541 aa14.05□□□□□ -0.16
CHRFAM7A-201ENST00000299847 CDY1Q9Y6F8 540 aa14.05□□□□□ -0.16
CHRFAM7A-201ENST00000299847 ALBP02768 609 aa14.05□□□□□ -0.16
CHRFAM7A-201ENST00000299847 TRIP4Q15650 581 aaPredicted RBP14.05□□□□□ -0.16
CHRFAM7A-201ENST00000299847 MICU2Q8IYU8 434 aa14.05□□□□□ -0.16
CHRFAM7A-201ENST00000299847 FAM129AQ9BZQ8 928 aa14.05□□□□□ -0.16
CHRFAM7A-201ENST00000299847 A0A087X0T9 212 aa14.04□□□□□ -0.16
CHRFAM7A-201ENST00000299847 FAM228BP0C875 321 aa14.04□□□□□ -0.16
CHRFAM7A-201ENST00000299847 EDRF1Q3B7T1 1238 aa14.04□□□□□ -0.16
CHRFAM7A-201ENST00000299847 PTAR1Q7Z6K3 402 aaPredicted RBP14.04□□□□□ -0.16
CHRFAM7A-201ENST00000299847 ATP6V0D2Q8N8Y2 350 aa14.04□□□□□ -0.16
CHRFAM7A-201ENST00000299847 SLITRK1Q96PX8 696 aa14.04□□□□□ -0.16
CHRFAM7A-201ENST00000299847 TMEM245Q9H330 911 aa14.04□□□□□ -0.16
CHRFAM7A-201ENST00000299847 TSC22D2O75157 780 aa14.04□□□□□ -0.16
CHRFAM7A-201ENST00000299847 B3GAT3O94766 335 aa14.04□□□□□ -0.16
CHRFAM7A-201ENST00000299847 OTUD4Q01804 1114 aaKnown RBP14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms