RNA–Protein interactions for RNA: ENST00000298396.6

SSX3-201, Transcript of SSX family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX3, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-201ENST00000298396 HCN2Q9UL51 889 aa6.31□□□□□ -1.4
SSX3-201ENST00000298396 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.31□□□□□ -1.4
SSX3-201ENST00000298396 SNX9Q9Y5X1 595 aa6.31□□□□□ -1.4
SSX3-201ENST00000298396 IRAK3Q9Y616 596 aa6.31□□□□□ -1.4
SSX3-201ENST00000298396 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.3□□□□□ -1.4
SSX3-201ENST00000298396 WDR27A2RRH5 827 aa6.3□□□□□ -1.4
SSX3-201ENST00000298396 BECN2A8MW95 431 aa6.3□□□□□ -1.4
SSX3-201ENST00000298396 RNF225M0QZC1 329 aaPredicted RBP6.3□□□□□ -1.4
SSX3-201ENST00000298396 TEX28O15482 410 aa6.3□□□□□ -1.4
SSX3-201ENST00000298396 LINC01565O15544 149 aa6.3□□□□□ -1.4
SSX3-201ENST00000298396 ICMTO60725 284 aa6.3□□□□□ -1.4
SSX3-201ENST00000298396 CLASP2O75122 1294 aaKnown RBP6.3□□□□□ -1.4
SSX3-201ENST00000298396 ATP2C2O75185 946 aa6.3□□□□□ -1.4
SSX3-201ENST00000298396 TACC1O75410 805 aa6.3□□□□□ -1.4
SSX3-201ENST00000298396 CXCL14O95715 111 aa6.3□□□□□ -1.4
SSX3-201ENST00000298396 WEE2P0C1S8 567 aa6.3□□□□□ -1.4
SSX3-201ENST00000298396 PNMA6AP0CW24 399 aaPredicted RBP6.3□□□□□ -1.4
SSX3-201ENST00000298396 ODC1P11926 461 aa6.3□□□□□ -1.4
SSX3-201ENST00000298396 WARSP23381 471 aaKnown RBP6.3□□□□□ -1.4
SSX3-201ENST00000298396 SERPINB4P48594 390 aa6.3□□□□□ -1.4
SSX3-201ENST00000298396 KRT17Q04695 432 aa6.3□□□□□ -1.4
SSX3-201ENST00000298396 INCA1Q0VD86 236 aa6.3□□□□□ -1.4
SSX3-201ENST00000298396 HYAL1Q12794 435 aa6.3□□□□□ -1.4
SSX3-201ENST00000298396 ELAVL2Q12926 359 aaKnown RBP6.3□□□□□ -1.4
SSX3-201ENST00000298396 MYO1EQ12965 1108 aa6.3□□□□□ -1.4
SSX3-201ENST00000298396 CUL2Q13617 745 aa6.3□□□□□ -1.4
SSX3-201ENST00000298396 SMC1AQ14683 1233 aaKnown RBP6.3□□□□□ -1.4
SSX3-201ENST00000298396 COL19A1Q14993 1142 aa6.3□□□□□ -1.4
SSX3-201ENST00000298396 SYCP1Q15431 976 aa6.3□□□□□ -1.4
SSX3-201ENST00000298396 PSMD5Q16401 504 aa6.3□□□□□ -1.4
SSX3-201ENST00000298396 DUSP6Q16828 381 aa6.3□□□□□ -1.4
SSX3-201ENST00000298396 EXOC3L4Q17RC7 722 aa6.3□□□□□ -1.4
SSX3-201ENST00000298396 TCEAL5Q5H9L2 206 aa6.3□□□□□ -1.4
SSX3-201ENST00000298396 ZNF667Q5HYK9 610 aa6.3□□□□□ -1.4
SSX3-201ENST00000298396 EFHC2Q5JST6 749 aa6.3□□□□□ -1.4
SSX3-201ENST00000298396 LCE2CQ5TA81 110 aa6.3□□□□□ -1.4
SSX3-201ENST00000298396 KLHDC7AQ5VTJ3 777 aa6.3□□□□□ -1.4
SSX3-201ENST00000298396 OVOS1Q6IE37 1185 aa6.3□□□□□ -1.4
SSX3-201ENST00000298396 IQCEQ6IPM2 695 aa6.3□□□□□ -1.4
SSX3-201ENST00000298396 LILRA6Q6PI73 481 aa6.3□□□□□ -1.4
SSX3-201ENST00000298396 FIGNL1Q6PIW4 674 aa6.3□□□□□ -1.4
SSX3-201ENST00000298396 DSTYKQ6XUX3 929 aa6.3□□□□□ -1.4
SSX3-201ENST00000298396 GBP6Q6ZN66 633 aa6.3□□□□□ -1.4
SSX3-201ENST00000298396 RRAGAQ7L523 313 aa6.3□□□□□ -1.4
SSX3-201ENST00000298396 USP37Q86T82 979 aa6.3□□□□□ -1.4
SSX3-201ENST00000298396 CEP57Q86XR8 500 aa6.3□□□□□ -1.4
SSX3-201ENST00000298396 GLYCTKQ8IVS8 523 aa6.3□□□□□ -1.4
SSX3-201ENST00000298396 ADGRF2Q8IZF7 708 aa6.3□□□□□ -1.4
SSX3-201ENST00000298396 TTC9BQ8N6N2 239 aa6.3□□□□□ -1.4
SSX3-201ENST00000298396 MRPL43Q8N983 215 aaKnown RBP6.3□□□□□ -1.4
SSX3-201ENST00000298396 APPL2Q8NEU8 664 aa6.3□□□□□ -1.4
SSX3-201ENST00000298396 OLIG1Q8TAK6 271 aa6.3□□□□□ -1.4
SSX3-201ENST00000298396 SLC22A17Q8WUG5 538 aa6.3□□□□□ -1.4
SSX3-201ENST00000298396 TAF4BQ92750 862 aa6.3□□□□□ -1.4
SSX3-201ENST00000298396 KLHL5Q96PQ7 755 aa6.3□□□□□ -1.4
SSX3-201ENST00000298396 ZSWIM1Q9BR11 485 aa6.3□□□□□ -1.4
SSX3-201ENST00000298396 LSM14BQ9BX40 385 aaKnown RBP6.3□□□□□ -1.4
SSX3-201ENST00000298396 TTYH3Q9C0H2 523 aa6.3□□□□□ -1.4
SSX3-201ENST00000298396 ELOVL4Q9GZR5 314 aa6.3□□□□□ -1.4
SSX3-201ENST00000298396 LMAN2LQ9H0V9 348 aa6.3□□□□□ -1.4
SSX3-201ENST00000298396 CRTAC1Q9NQ79 661 aa6.3□□□□□ -1.4
SSX3-201ENST00000298396 ENTPD7Q9NQZ7 604 aa6.3□□□□□ -1.4
SSX3-201ENST00000298396 STIM2Q9P246 746 aa6.3□□□□□ -1.4
SSX3-201ENST00000298396 FNIP2Q9P278 1114 aa6.3□□□□□ -1.4
SSX3-201ENST00000298396 MAGEC2Q9UBF1 373 aaPredicted RBP6.3□□□□□ -1.4
SSX3-201ENST00000298396 BACE2Q9Y5Z0 518 aa6.3□□□□□ -1.4
SSX3-201ENST00000298396 FHOD1Q9Y613 1164 aa6.3□□□□□ -1.4
SSX3-201ENST00000298396 CDY1Q9Y6F8 540 aa6.3□□□□□ -1.4
SSX3-201ENST00000298396 UNC80Q8N2C7 3258 aa6.3□□□□□ -1.4
SSX3-201ENST00000298396 MYBPHLA2RUH7 354 aa6.29□□□□□ -1.4
SSX3-201ENST00000298396 PER2O15055 1255 aa6.29□□□□□ -1.4
SSX3-201ENST00000298396 TRAPPC3O43617 180 aa6.29□□□□□ -1.4
SSX3-201ENST00000298396 HUS1O60921 280 aa6.29□□□□□ -1.4
SSX3-201ENST00000298396 CILPO75339 1184 aa6.29□□□□□ -1.4
SSX3-201ENST00000298396 ABLIM3O94929 683 aa6.29□□□□□ -1.4
SSX3-201ENST00000298396 SEC24AO95486 1093 aa6.29□□□□□ -1.4
SSX3-201ENST00000298396 URODP06132 367 aa6.29□□□□□ -1.4
SSX3-201ENST00000298396 PDGFRBP09619 1106 aa6.29□□□□□ -1.4
SSX3-201ENST00000298396 EPCAMP16422 314 aa6.29□□□□□ -1.4
SSX3-201ENST00000298396 CD58P19256 250 aa6.29□□□□□ -1.4
SSX3-201ENST00000298396 CDK11BP21127 795 aaKnown RBP6.29□□□□□ -1.4
SSX3-201ENST00000298396 PAX3P23760 479 aa6.29□□□□□ -1.4
SSX3-201ENST00000298396 OR1D2P34982 312 aa6.29□□□□□ -1.4
SSX3-201ENST00000298396 LTBRP36941 435 aa6.29□□□□□ -1.4
SSX3-201ENST00000298396 NRIP1P48552 1158 aa6.29□□□□□ -1.4
SSX3-201ENST00000298396 CLCN4P51793 760 aa6.29□□□□□ -1.4
SSX3-201ENST00000298396 ZNF132P52740 706 aa6.29□□□□□ -1.4
SSX3-201ENST00000298396 NDST1P52848 882 aa6.29□□□□□ -1.4
SSX3-201ENST00000298396 CACNA2D1P54289 1103 aa6.29□□□□□ -1.4
SSX3-201ENST00000298396 RAD23BP54727 409 aa6.29□□□□□ -1.4
SSX3-201ENST00000298396 JAM2P57087 298 aa6.29□□□□□ -1.4
SSX3-201ENST00000298396 PSMC1P62191 440 aaKnown RBP6.29□□□□□ -1.4
SSX3-201ENST00000298396 TNNC1P63316 161 aa6.29□□□□□ -1.4
SSX3-201ENST00000298396 ROR1Q01973 937 aa6.29□□□□□ -1.4
SSX3-201ENST00000298396 UBXN1Q04323 297 aa6.29□□□□□ -1.4
SSX3-201ENST00000298396 YWHAHQ04917 246 aaPredicted RBP6.29□□□□□ -1.4
SSX3-201ENST00000298396 NAA30Q147X3 362 aaPredicted RBP6.29□□□□□ -1.4
SSX3-201ENST00000298396 CTXN3Q4LDR2 81 aa6.29□□□□□ -1.4
SSX3-201ENST00000298396 E4F1Q66K89 784 aaPredicted RBP6.29□□□□□ -1.4
SSX3-201ENST00000298396 SLC8B1Q6J4K2 584 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms