RNA–Protein interactions for RNA: ENST00000298317.8

RPUSD4-201, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD4, Length 2,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-201ENST00000298317 ARPINQ7Z6K5 226 aa14.1□□□□□ -0.15
RPUSD4-201ENST00000298317 SIAH1Q8IUQ4 282 aa14.1□□□□□ -0.15
RPUSD4-201ENST00000298317 PALM2Q8IXS6 379 aa14.1□□□□□ -0.15
RPUSD4-201ENST00000298317 TMC2Q8TDI7 906 aa14.1□□□□□ -0.15
RPUSD4-201ENST00000298317 GDPD5Q8WTR4 605 aa14.1□□□□□ -0.15
RPUSD4-201ENST00000298317 RPGRQ92834 1020 aaKnown RBP14.1□□□□□ -0.15
RPUSD4-201ENST00000298317 HAUS1Q96CS2 278 aa14.1□□□□□ -0.15
RPUSD4-201ENST00000298317 DNAJC1Q96KC8 554 aaKnown RBP14.1□□□□□ -0.15
RPUSD4-201ENST00000298317 BTBD9Q96Q07 612 aa14.1□□□□□ -0.15
RPUSD4-201ENST00000298317 CDCA7Q9BWT1 371 aaPredicted RBP14.1□□□□□ -0.15
RPUSD4-201ENST00000298317 RHBDL2Q9NX52 303 aa14.1□□□□□ -0.15
RPUSD4-201ENST00000298317 ZHX2Q9Y6X8 837 aa14.1□□□□□ -0.15
RPUSD4-201ENST00000298317 CASQ2O14958 399 aaPredicted RBP14.09□□□□□ -0.15
RPUSD4-201ENST00000298317 ZC3H11AO75152 810 aaKnown RBP eCLIP14.09□□□□□ -0.158e-8■■■■■ 44.9
RPUSD4-201ENST00000298317 FAM155BO75949 473 aa14.09□□□□□ -0.15
RPUSD4-201ENST00000298317 PGM3O95394 542 aa14.09□□□□□ -0.15
RPUSD4-201ENST00000298317 ECE1P42892 770 aa14.09□□□□□ -0.15
RPUSD4-201ENST00000298317 CCNIQ14094 377 aa14.09□□□□□ -0.15
RPUSD4-201ENST00000298317 LRRC38Q5VT99 294 aa14.09□□□□□ -0.15
RPUSD4-201ENST00000298317 CES4AQ5XG92 561 aa14.09□□□□□ -0.15
RPUSD4-201ENST00000298317 PHF13Q86YI8 300 aaPredicted RBP14.09□□□□□ -0.15
RPUSD4-201ENST00000298317 JADE3Q92613 823 aa14.09□□□□□ -0.15
RPUSD4-201ENST00000298317 CATSPER2Q96P56 530 aa14.09□□□□□ -0.15
RPUSD4-201ENST00000298317 SRPK1Q96SB4 655 aaKnown RBP14.09□□□□□ -0.15
RPUSD4-201ENST00000298317 PI4K2AQ9BTU6 479 aa14.09□□□□□ -0.15
RPUSD4-201ENST00000298317 RBM38Q9H0Z9 239 aaKnown RBP14.09□□□□□ -0.15
RPUSD4-201ENST00000298317 GINM1Q9NU53 330 aa14.09□□□□□ -0.15
RPUSD4-201ENST00000298317 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.09□□□□□ -0.15
RPUSD4-201ENST00000298317 IP6K2Q9UHH9 426 aa14.09□□□□□ -0.15
RPUSD4-201ENST00000298317 ZNRF3Q9ULT6 936 aa14.09□□□□□ -0.15
RPUSD4-201ENST00000298317 WDR37Q9Y2I8 494 aa14.09□□□□□ -0.15
RPUSD4-201ENST00000298317 QSER1Q2KHR3 1735 aa14.09□□□□□ -0.15
RPUSD4-201ENST00000298317 MEI4A8MW99 385 aa14.09□□□□□ -0.15
RPUSD4-201ENST00000298317 TMEM63AO94886 807 aa14.09□□□□□ -0.15
RPUSD4-201ENST00000298317 RPL5P46777 297 aaKnown RBP14.09□□□□□ -0.15
RPUSD4-201ENST00000298317 ALDH18A1P54886 795 aaKnown RBP14.09□□□□□ -0.15
RPUSD4-201ENST00000298317 CEP55Q53EZ4 464 aa14.09□□□□□ -0.15
RPUSD4-201ENST00000298317 RBM44Q6ZP01 1051 aaKnown RBP14.09□□□□□ -0.15
RPUSD4-201ENST00000298317 FEZF2Q8TBJ5 459 aa14.09□□□□□ -0.15
RPUSD4-201ENST00000298317 ACAP3Q96P50 834 aa14.09□□□□□ -0.15
RPUSD4-201ENST00000298317 SENP7Q9BQF6 1050 aa14.09□□□□□ -0.15
RPUSD4-201ENST00000298317 ZNF577Q9BSK1 485 aa14.09□□□□□ -0.15
RPUSD4-201ENST00000298317 TEKT3Q9BXF9 490 aa14.09□□□□□ -0.15
RPUSD4-201ENST00000298317 SIRPGQ9P1W8 387 aa14.09□□□□□ -0.15
RPUSD4-201ENST00000298317 GGA1Q9UJY5 639 aa14.09□□□□□ -0.15
RPUSD4-201ENST00000298317 CHMP2BQ9UQN3 213 aa14.09□□□□□ -0.15
RPUSD4-201ENST00000298317 PEX1O43933 1283 aa14.08□□□□□ -0.15
RPUSD4-201ENST00000298317 TFAP2AP05549 437 aa14.08□□□□□ -0.15
RPUSD4-201ENST00000298317 CFHP08603 1231 aa14.08□□□□□ -0.15
RPUSD4-201ENST00000298317 GYS1P13807 737 aa14.08□□□□□ -0.15
RPUSD4-201ENST00000298317 AQP5P55064 265 aa14.08□□□□□ -0.15
RPUSD4-201ENST00000298317 GDF10P55107 478 aa14.08□□□□□ -0.15
RPUSD4-201ENST00000298317 NCKAP1LP55160 1127 aa14.08□□□□□ -0.15
RPUSD4-201ENST00000298317 BTKQ06187 659 aa14.08□□□□□ -0.15
RPUSD4-201ENST00000298317 TFDP3Q5H9I0 405 aa14.08□□□□□ -0.15
RPUSD4-201ENST00000298317 ATG16L1Q676U5 607 aa14.08□□□□□ -0.15
RPUSD4-201ENST00000298317 OLFML2BQ68BL8 750 aa14.08□□□□□ -0.15
RPUSD4-201ENST00000298317 TRIM72Q6ZMU5 477 aa14.08□□□□□ -0.15
RPUSD4-201ENST00000298317 RNF168Q8IYW5 571 aaPredicted RBP14.08□□□□□ -0.15
RPUSD4-201ENST00000298317 ALDH16A1Q8IZ83 802 aa14.08□□□□□ -0.15
RPUSD4-201ENST00000298317 GMCL1P1Q8NEA9 526 aa14.08□□□□□ -0.15
RPUSD4-201ENST00000298317 PPP1R14BQ96C90 147 aa14.08□□□□□ -0.15
RPUSD4-201ENST00000298317 GMCL1Q96IK5 515 aa14.08□□□□□ -0.15
RPUSD4-201ENST00000298317 MFSD14AQ96MC6 490 aa14.08□□□□□ -0.15
RPUSD4-201ENST00000298317 MECRQ9BV79 373 aa14.08□□□□□ -0.15
RPUSD4-201ENST00000298317 SORCS3Q9UPU3 1222 aa14.08□□□□□ -0.15
RPUSD4-201ENST00000298317 IVNS1ABPQ9Y6Y0 642 aa14.08□□□□□ -0.15
RPUSD4-201ENST00000298317 SIPA1L1O43166 1804 aa14.08□□□□□ -0.16
RPUSD4-201ENST00000298317 TCRBV7S3A2A0A539 114 aa14.08□□□□□ -0.16
RPUSD4-201ENST00000298317 TCRBV9S1A1TA0A576 114 aa14.08□□□□□ -0.16
RPUSD4-201ENST00000298317 COPEO14579 308 aa14.08□□□□□ -0.16
RPUSD4-201ENST00000298317 E2F6O75461 281 aa14.08□□□□□ -0.16
RPUSD4-201ENST00000298317 ARP10275 920 aa14.08□□□□□ -0.16
RPUSD4-201ENST00000298317 CDKN2BP42772 138 aa14.08□□□□□ -0.16
RPUSD4-201ENST00000298317 TMPRSS15P98073 1019 aa14.08□□□□□ -0.16
RPUSD4-201ENST00000298317 NCOA4Q13772 614 aa14.08□□□□□ -0.16
RPUSD4-201ENST00000298317 UBAP2LQ14157 1087 aaKnown RBP14.08□□□□□ -0.16
RPUSD4-201ENST00000298317 BBS9Q3SYG4 887 aa14.08□□□□□ -0.16
RPUSD4-201ENST00000298317 ZFYVE27Q5T4F4 411 aa14.08□□□□□ -0.16
RPUSD4-201ENST00000298317 KLHDC10Q6PID8 442 aa14.08□□□□□ -0.16
RPUSD4-201ENST00000298317 MARVELD2Q8N4S9 558 aa14.08□□□□□ -0.16
RPUSD4-201ENST00000298317 SMYD1Q8NB12 490 aa14.08□□□□□ -0.16
RPUSD4-201ENST00000298317 POMGNT1Q8WZA1 660 aa14.08□□□□□ -0.16
RPUSD4-201ENST00000298317 E2F7Q96AV8 911 aa14.08□□□□□ -0.16
RPUSD4-201ENST00000298317 FBXL18Q96ME1 805 aa14.08□□□□□ -0.16
RPUSD4-201ENST00000298317 AGAP3Q96P47 875 aa14.08□□□□□ -0.16
RPUSD4-201ENST00000298317 C1orf112Q9NSG2 853 aa14.08□□□□□ -0.16
RPUSD4-201ENST00000298317 SPATA7Q9P0W8 599 aa14.08□□□□□ -0.16
RPUSD4-201ENST00000298317 HBS1LQ9Y450 684 aaKnown RBP14.08□□□□□ -0.16
RPUSD4-201ENST00000298317 STRCQ7RTU9 1775 aa14.08□□□□□ -0.16
RPUSD4-201ENST00000298317 SDR42E2A6NKP2 422 aa14.07□□□□□ -0.16
RPUSD4-201ENST00000298317 SLC16A4O15374 487 aa14.07□□□□□ -0.16
RPUSD4-201ENST00000298317 NDUFB10O96000 172 aa14.07□□□□□ -0.16
RPUSD4-201ENST00000298317 INHBAP08476 426 aa14.07□□□□□ -0.16
RPUSD4-201ENST00000298317 RARRES1P49788 294 aa14.07□□□□□ -0.16
RPUSD4-201ENST00000298317 KCNQ4P56696 695 aa14.07□□□□□ -0.16
RPUSD4-201ENST00000298317 ZNF200P98182 395 aaPredicted RBP14.07□□□□□ -0.16
RPUSD4-201ENST00000298317 PLCB3Q01970 1234 aa14.07□□□□□ -0.16
RPUSD4-201ENST00000298317 C1QBPQ07021 282 aaKnown RBP14.07□□□□□ -0.16
RPUSD4-201ENST00000298317 ZNF252P-AS1Q0IIN9 211 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms